| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033E06 | Sequence | 466 | 010776 (7) | ref|XP_008809712.1| | 1e-54 | PREDICTED: acidic endochitinase-like [Phoenix dactylifera] | 732 | 010776 (7) | gb|ABN03967.1| | 8e-98 | acidic chitinase [Gossypium hirsutum] |
| JMFN011P16 | Sequence | 612 | 010776 (7) | gb|ABN03967.1| | 3e-86 | acidic chitinase [Gossypium hirsutum] | |||||
| JMFN040M05 | Sequence | 638 | 010776 (7) | gb|ABN03967.1| | 2e-87 | acidic chitinase [Gossypium hirsutum] | |||||
| JMFS070C11 | Sequence | 630 | 010776 (7) | gb|ABN03967.1| | 2e-86 | acidic chitinase [Gossypium hirsutum] | |||||
| JMSF032C15 | Sequence | 703 | 010776 (7) | gb|ABN03967.1| | 3e-93 | acidic chitinase [Gossypium hirsutum] | 680 | 010776 (7) | gb|ABN03967.1| | 1e-88 | acidic chitinase [Gossypium hirsutum] |
This contig is upended
. : . : . : . : . : . :
rJMSF032C15- AATTAAAGCTAGTACAATATTATGTTCGATCTCCCAATTCC
____________________________________________________________
consensus AATTAAAGCTAGTACAATATTATGTTCGATCTCCCAATTCC
. : . : . : . : . : . :
rJMSF032C15- ATCAAAAGGAGAAACAAACGTTTATTATGATGTATGAAGTAGGCCGGATCGGATAGGTTT
rJMFF033E06- AAAGGAGAAACAAACGTTTATTATGATGTATGAAGTAGGCCGGATCGGATAGGTTT
____________________________________________________________
consensus ATCAAAAGGAGAAACAAACGTTTATTATGATGTATGAAGTAGGCCGGATCGGATAGGTTT
. : . : . : . : . : . :
rJMSF032C15- GATCAAACCGCAGACTTAATACTTGAGCTGTAGCCATTGTCAAAGAATTTAGACCAGAGC
rJMFF033E06- GATCAAACCGCAGACTTAATACTTGAGCTGTAGCCATTGTCAAAGAATTTAGACCAGAGC
____________________________________________________________
consensus GATCAAACCGCAGACTTAATACTTGAGCTGTAGCCATTGTCAAAGAATTTAGACCAGAGC
. : . : . : . : . : . :
rJMSF032C15- ATTACGCCTCCGTATTTGGGTGAACCCTTGATCGCCGGGAGAATCTGAGAAGTAAGAACA
rJMFF033E06- ATTACGCCTCCGTATTTGGGTGAACCCTTGATCGCCGGGAGAATCTGAGAAGTAAGAACA
____________________________________________________________
consensus ATTACGCCTCCGTATTTGGGTGAACCCTTGATCGCCGGGAGAATCTGAGAAGTAAGAACA
. : . : . : . : . : . :
rJMSF032C15- TCGGCAGGAATGAAACCGTTGTTGGCTGCATTCTGAGAAGCAGGCAATCCCATTAATACT
rJMFF033E06- TCGGCAGGAATGAAACCGTTGTTGGCTGCATTCTGAGAAGCAGGCAATCCCATTAATACT
____________________________________________________________
consensus TCGGCAGGAATGAAACCGTTGTTGGCTGCATTCTGAGAAGCAGGCAATCCCATTAATACT
. : . : . : . : . : . :
rJMSF032C15- TTCTGTGCCGGAATTTTTGACCAGTTATTGTTCCAAGAGTTGAGAATATCGGTGGTGTCC
rJMFF033E06- TTCTGTGCCGGAATTTTTGACCAGTTATTGTTCCAAGAGTTGAGAATATCGGTGGTGTCC
JMFN040M05+ C
JMSF032C15+ TGACCAGTTATTGTTCCAAGAGTTGAGAATATCGGTGGTGTCC
____________________________________________________________
consensus TTCTGTGCCGGAATTTTTGACCAGTTATTGTTCCAAGAGTTGAGAATATCGGTGGTGTCC
. : . : . : . : . : . :
rJMSF032C15- CCGGCAGAATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
rJMFF033E06- CCGGCAGAATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
JMFN011P16+ AATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
JMFN040M05+ CCGGCAGAATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
JMFS070C11+ ATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
JMSF032C15+ CCGGCAGAATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
____________________________________________________________
consensus CCGGCAGAATATTGACAGGCGGCGCTGGGGTTGTTGTAGAACTGCACCCACACGTAGTCG
. : . : . : . : . : . :
rJMSF032C15- AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
rJMFF033E06- AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
JMFN011P16+ AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
JMFN040M05+ AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
JMFS070C11+ AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
JMSF032C15+ AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
____________________________________________________________
consensus AAAAGCCCCGTGTTTATAGCGGTTTGCAGACTTTGGTCGGGGAATGGACATTGCGGCGCT
. : . : . : . : . : . :
rJMSF032C15- GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
rJMFF033E06- GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
JMFN011P16+ GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
JMFN040M05+ GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
JMFS070C11+ GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
JMSF032C15+ GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
____________________________________________________________
consensus GCTGTCAATAAAACGTTTGTTCCAAAAGCTTTTAATGCCTTGGCCAATTCGTCGTAGAAT
. : . : . : . : . : . :
rJMSF032C15- TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
rJMFF033E06- TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
JMFN011P16+ TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
JMFN040M05+ TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
JMFS070C11+ TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
JMFF033E06+ ACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
JMSF032C15+ TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
____________________________________________________________
consensus TGGCCGCCGCCGGACTCTATATCAAAGTCGATTCCGTCAAGGACCGCATCCCCTAGTGGC
. : . : . : . : . : . :
rJMSF032C15- CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
rJMFF033E06- CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
JMFN011P16+ CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
JMFN040M05+ CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
JMFS070C11+ CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
JMFF033E06+ CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
JMSF032C15+ CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
____________________________________________________________
consensus CTTGACCCTGACTGCCCTCCAAGATAATTGTCCCACAGATACTGTGCCACATTTTTGGCA
. : . : . : . : . : . :
rJMSF032C15- TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCA
rJMFF033E06- TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
JMFN011P16+ TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
JMFN040M05+ TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
JMFS070C11+ TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
JMFF033E06+ TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
JMSF032C15+ TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
____________________________________________________________
consensus TCATCTGCGGAGGAAAGGGAGTAGCTTCCGGCGCCACCACCAAGGGAAAGCAAGACTTTG
. : . : . : . : . : . :
rJMFF033E06- ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
JMFN011P16+ ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
JMFN040M05+ ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
JMFS070C11+ ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
JMFF033E06+ ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
JMSF032C15+ ATGCCTTGGCTATTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
____________________________________________________________
consensus ATGCCTTGGCTCTTACAGGCTTTGATCTCGTCGCTCAGGCCAGTACACGTATTAGCAGCG
. : . : . : . : . : . :
rJMFF033E06- GGATTGCAATGACCGG
JMFN011P16+ GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
JMFN040M05+ GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
JMFS070C11+ GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
JMFF033E06+ GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
JMSF032C15+ GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
____________________________________________________________
consensus GGATTGCAATGACCGGCAAGGTTGAGGACCGGAGTCCGGCCATTGCCAAACGTTGTTAAG
. : . : . : . : . : . :
JMFN011P16+ AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
JMFN040M05+ AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
JMFS070C11+ AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
JMFF033E06+ AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
JMSF032C15+ AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
____________________________________________________________
consensus AAAGCTATGTTTACGATGTTGTAGTTGTTGGAGGCGCAGGTGTCGCGCAGGGTGCCCTCG
. : . : . : . : . : . :
JMFN011P16+ TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
JMFN040M05+ TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
JMFS070C11+ TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
JMFF033E06+ TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
JMSF032C15+ TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
____________________________________________________________
consensus TTCCCATTTTGTCCCCAATATATCGCGATGTCTGCCCCATTAGCCAAGGAAAGGAGCAAA
. : . : . : . : . : . :
JMFN011P16+ AGAGAGAAGGCAAATATGA
JMFN040M05+ AGAGAGAAGGCAAATATGATCTTAAACGCCATATTTT
JMFS070C11+ AGAGAGAAGGCAAATATGATCTTAAACGCCATATTTT
JMFF033E06+ AGAGAGAAGGCAAATATGATCTTAAACGCCATATTTTGTGTAGTTTGAAGCTTGGATG
JMSF032C15+ AGAGAGAAGGCAAATATGATCTTAAACGCCATATTTTGTGTAGTTTGAAGCTTGGATGGC
____________________________________________________________
consensus AGAGAGAAGGCAAATATGATCTTAAACGCCATATTTTGTGTAGTTTGAAGCTTGGATGGC