clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF012P17 | Sequence | 529 | 010773 (5) | ref|XP_010551185.1| | 1e-90 | PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian | 243 | 008183 (5) | |||
JMFF017E23 | Sequence | 548 | 010773 (5) | ref|XP_010551185.1| | 7e-97 | PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian | 287 | 008183 (5) | |||
JMFF028I20 | Sequence | 588 | 010773 (5) | ref|XP_010551185.1| | 5e-106 | PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian | 266 | 008183 (5) | |||
JMFF038B09 | Sequence | 413 | 010773 (5) | gb|AAM60858.1| | 6e-61 | GTP binding protein, putative [Arabidopsis thaliana] | 248 | 008183 (5) | |||
JMSF031P09 | Sequence | 629 | 010773 (5) | ref|XP_010551185.1| | 4e-116 | PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian | 340 | 002869 (6) | ref|NP_001235984.1| | 5e-32 | uncharacterized protein LOC100526919 [Glycine max] gb|ACU15939.1| unknown [Glyci |
This contig is upended
. : . : . : . : . : . :
JMSF031P09+ GCGATGCATTCGAAAGCTTCTTCCACATT
____________________________________________________________
consensus GCGATGCATTCGAAAGCTTCTTCCACATT
. : . : . : . : . : . :
JMFF028I20+ TGGCAGAAGTCTCAGAGTATGGAATGTTCCCTTTTGAGGCACACCAAGC
JMFF017E23+ ACACCAAGC
JMSF031P09+ GGTGCCTTCCTTGGCAGAAGTCTCAAAGTATGGAATGTTCCCTTTTGAGGCACACCAAGC
____________________________________________________________
consensus GGTGCCTTCCTTGGCAGAAGTCTCAGAGTATGGAATGTTCCCTTTTGAGGCACACCAAGC
. : . : . : . : . : . :
JMFF012P17+ TTCTCAGATACCACTCTACTATTTCCCCCATCGACATCAATTTTGTTGCC
JMFF028I20+ CCGAGCCTTTTTCTCAGATACCACTCTACTATTTCCCCCATCGACATCAATTTTGTTGCC
JMFF017E23+ CCGAGCCTTTTTCTCAGATACCACTCTACTATTTCCCCCATCAACATCAATTTTGTTGCC
JMSF031P09+ CCGAGCCTTTTTCTCAGATACCACTCTACTATTTCCCCCATCAACATCAATTTTGTTGCC
____________________________________________________________
consensus CCGAGCCTTTTTCTCAGATACCACTCTACTATTTCCCCCATCGACATCAATTTTGTTGCC
. : . : . : . : . : . :
JMFF012P17+ GATCACCACAAATGGAAAATTTTCTGGATCAGATGGGCTTGCCTGAATAAGGAACTCATC
JMFF028I20+ GATCACCACAAATGGAAAATTTTCTGGATCAGATGGGCTTGCCTGAATAAGGAACTCATC
JMFF017E23+ GATCACCACAAATGGAAAATTTTCTGGATCAGATGGGCTTGCCTGAATAAGGAACTCATC
JMSF031P09+ GATCACCACAAATGGAAAATTTTCTGGATCAGATGGGCTTGCCTGAATAAGGAACTCATC
____________________________________________________________
consensus GATCACCACAAATGGAAAATTTTCTGGATCAGATGGGCTTGCCTGAATAAGGAACTCATC
. : . : . : . : . : . :
JMFF012P17+ CCTCCAGTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
JMFF038B09+ GTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
JMFF028I20+ CCTCCAGTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
JMFF017E23+ CCTCCAGTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
JMSF031P09+ CCTCCAGTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
____________________________________________________________
consensus CCTCCAGTTGTTTAGGTTCTCAAATGACTTCATTGAATTTACATCGTAGACAAGGACACA
. : . : . : . : . : . :
JMFF012P17+ GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
JMFF038B09+ GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
JMFF028I20+ GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
JMFF017E23+ GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
JMSF031P09+ GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
____________________________________________________________
consensus GCAATCTGCACCCCGATAGAAGGCTACACCAAGACTCTGAAATCTTTCCTGGCCAGCTGT
. : . : . : . : . : . :
JMFF012P17+ ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
JMFF038B09+ ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
JMFF028I20+ ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
JMFF017E23+ ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
JMSF031P09+ ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
____________________________________________________________
consensus ATCCCAGATCTGTAAGGTGAATAGCCTATCTTCAAACTGCACTTCCTTGGTCAAGAAATC
. : . : . : . : . : . :
JMFF012P17+ AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
JMFF038B09+ AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
JMFF028I20+ AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
JMFF017E23+ AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
JMSF031P09+ AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
____________________________________________________________
consensus AGCTCCAATAGTGGCTTTGTACTGATTGCTAAACTTCTTGTTTACATATTGATTCATCAA
. : . : . : . : . : . :
JMFF012P17+ CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
JMFF038B09+ CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
JMFF028I20+ CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
JMFF017E23+ CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
JMSF031P09+ CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
____________________________________________________________
consensus CGAGGTCTTCCCAACCCCGCTATCGCCGAGGATGATGACCTTCAAAAGCGTTCTTCTGCG
. : . : . : . : . : . :
JMFF012P17+ AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
JMFF038B09+ AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
JMFF028I20+ AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
JMFF017E23+ AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
JMSF031P09+ AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
____________________________________________________________
consensus AGAAGGCATCTTCAGGGGCGGCGGAGATAGAGGCGATCTGTACGGTGGTGGAAGGAAAAG
. : . : . : . : . : . :
JMFF012P17+ GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGAC
JMFF038B09+ GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGAC
JMFF028I20+ GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGAC
JMFF017E23+ GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGAC
JMSF031P09+ GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGACC
____________________________________________________________
consensus GCAACAACTTTTTTTCTAGAGACGCGATTGCCGATTGCCGATTCAAGGAAGATACAGACC