Contig 010772:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015O03Sequence465010772 (4)ref|XP_009607404.1|2e-38PREDICTED: expansin-A10-like [Nicotiana tomentosiformis]791010772 (4)ref|XP_003544930.1|2e-93PREDICTED: expansin-A8 [Glycine max] gb|KHN01887.1| Expansin-A8 [Glycine soja]
JMSF031O12Sequence666010772 (4)ref|XP_009607404.1|9e-83PREDICTED: expansin-A10-like [Nicotiana tomentosiformis]685010772 (4)ref|XP_003544930.1|2e-87PREDICTED: expansin-A8 [Glycine max] gb|KHN01887.1| Expansin-A8 [Glycine soja]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031O12- G
rJMSF015O03- CTTAG
                      ____________________________________________________________
consensus CTTAG
 
. : . : . : . : . : . :
rJMSF031O12- CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
rJMSF015O03- CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
                      ____________________________________________________________
consensus CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
 
. : . : . : . : . : . :
rJMSF031O12- AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
rJMSF015O03- AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
                      ____________________________________________________________
consensus AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
 
. : . : . : . : . : . :
rJMSF031O12- ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
rJMSF015O03- ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
                      ____________________________________________________________
consensus ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
 
. : . : . : . : . : . :
rJMSF031O12- CCTTCAAAAGTTTGACCAAATTGCCAGTCCGGCGGAGCGACGTCCAAATTGGTGACGGTG
rJMSF015O03- CCTTCAAAAGTTTGACCAAATTGCCGGTCCGG-GGAGCGACGTCCAAATTGGTGACGGTG
                      ____________________________________________________________
consensus CCTTCAAAAGTTTGACCAAATTGCCGGTCCGGCGGAGCGACGTCCAAATTGGTGACGGTG
 
. : . : . : . : . : . :
rJMSF031O12- CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
rJMSF015O03- CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
                      ____________________________________________________________
consensus CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
 
. : . : . : . : . : . :
rJMSF031O12- TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
rJMSF015O03- TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
JMSF031O12+ TTGATG
                      ____________________________________________________________
consensus TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
 
. : . : . : . : . : . :
rJMSF031O12- AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
rJMSF015O03- AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
JMSF031O12+ AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
                      ____________________________________________________________
consensus AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
 
. : . : . : . : . : . :
rJMSF031O12- GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
rJMSF015O03- GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
JMSF031O12+ GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
                      ____________________________________________________________
consensus GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
 
. : . : . : . : . : . :
rJMSF031O12- GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
rJMSF015O03- GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
JMSF031O12+ GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
                      ____________________________________________________________
consensus GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
 
. : . : . : . : . : . :
rJMSF031O12- TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
rJMSF015O03- TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
JMSF015O03+ GGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
JMSF031O12+ TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
                      ____________________________________________________________
consensus TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
 
. : . : . : . : . : . :
rJMSF031O12- GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
rJMSF015O03- GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
JMSF015O03+ GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
JMSF031O12+ GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
                      ____________________________________________________________
consensus GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
 
. : . : . : . : . : . :
rJMSF031O12- TCTTCATTGCACTTCAATTCGTAG
rJMSF015O03- TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAAC-ATGCT
JMSF015O03+ TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
JMSF031O12+ TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
                      ____________________________________________________________
consensus TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
 
. : . : . : . : . : . :
rJMSF015O03- GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
JMSF015O03+ GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
JMSF031O12+ GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
                      ____________________________________________________________
consensus GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
 
. : . : . : . : . : . :
rJMSF015O03- GCTCCTCC
JMSF015O03+ GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
JMSF031O12+ GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
                      ____________________________________________________________
consensus GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
 
. : . : . : . : . : . :
JMSF015O03+ CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
JMSF031O12+ CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
                      ____________________________________________________________
consensus CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
 
. : . : . : . : . : . :
JMSF015O03+ AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
JMSF031O12+ AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
                      ____________________________________________________________
consensus AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
 
. : . : . : . : . : . :
JMSF015O03+ CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC
JMSF031O12+ CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC
                      ____________________________________________________________
consensus CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC