Contig 010772:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031O12-                                                                     G
rJMSF015O03-                                                                 CTTAG
                      ____________________________________________________________
consensus                                                                    CTTAG
 
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rJMSF031O12-          CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
rJMSF015O03-          CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
                      ____________________________________________________________
consensus             CTATTTATTATTCAATTTTTGCACACACTTAATACTAGTAAACAATAATACCAATTAAAC
 
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rJMSF031O12-          AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
rJMSF015O03-          AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
                      ____________________________________________________________
consensus             AAAAAAGGAAAAATAATAGAGTATTTTCATCTGTCTTTTCCATTTGAAAAACAATATAAT
 
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rJMSF031O12-          ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
rJMSF015O03-          ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
                      ____________________________________________________________
consensus             ATTTGATGGATAAAGACATGAGCCATGTCCATGTTACATTATTCTTCTTAAAACTGACCA
 
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rJMSF031O12-          CCTTCAAAAGTTTGACCAAATTGCCAGTCCGGCGGAGCGACGTCCAAATTGGTGACGGTG
rJMSF015O03-          CCTTCAAAAGTTTGACCAAATTGCCGGTCCGG-GGAGCGACGTCCAAATTGGTGACGGTG
                      ____________________________________________________________
consensus             CCTTCAAAAGTTTGACCAAATTGCCGGTCCGGCGGAGCGACGTCCAAATTGGTGACGGTG
 
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rJMSF031O12-          CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
rJMSF015O03-          CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
                      ____________________________________________________________
consensus             CGGCCGTCGCTGGCGGTGACCCGAAAAGAGAGGCTTTGACCGTTGAGATAAGAGTGGGCT
 
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rJMSF031O12-          TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
rJMSF015O03-          TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
JMSF031O12+                                                                 TTGATG
                      ____________________________________________________________
consensus             TCCCAATTTTGCCCCCAATTTCTTGACATGGGCATCCACCCTGTCCTTGACCCCTTGATG
 
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rJMSF031O12-          AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
rJMSF015O03-          AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
JMSF031O12+           AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
                      ____________________________________________________________
consensus             AACACTGAGTCAATGTCTCCTGCTCCCCCAACGTTTGTTATCAACAAAAGATTAAAGTAT
 
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rJMSF031O12-          GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
rJMSF015O03-          GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
JMSF031O12+           GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
                      ____________________________________________________________
consensus             GCATGTCCATTGATGGTGAACCTCATTCCTCCTTTCTTCTCACAAGCAATTCTTCTGTAG
 
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rJMSF031O12-          GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
rJMSF015O03-          GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
JMSF031O12+           GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
                      ____________________________________________________________
consensus             GCAACTGCGACAATTCCGGCTCGGTATTGAGCGATTTGAAGGAAAGCGGGCTCGGCTAAG
 
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rJMSF031O12-          TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
rJMSF015O03-          TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
JMSF015O03+                          GGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
JMSF031O12+           TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
                      ____________________________________________________________
consensus             TCGAAGTGTTGGAGAGGAGGATTACACCACCCGCCGTGATTGTTAGCCAAGGCAAAGTTA
 
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rJMSF031O12-          GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
rJMSF015O03-          GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
JMSF015O03+           GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
JMSF031O12+           GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
                      ____________________________________________________________
consensus             GGTGGGCAGAAGTTGGTGGCGGTGACGGTGATGCTGCCGGGGTGGCACACCCTTGATTCT
 
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rJMSF031O12-          TCTTCATTGCACTTCAATTCGTAG                                    
rJMSF015O03-          TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAAC-ATGCT
JMSF015O03+           TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
JMSF031O12+           TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
                      ____________________________________________________________
consensus             TCTTCATTGCACTTCAATTCGTAGCATGCCCCGCAGCTCGACCCGCTGTTGAACAATGCT
 
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rJMSF015O03-          GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
JMSF015O03+           GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
JMSF031O12+           GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
                      ____________________________________________________________
consensus             GTACTTAAGGCTGCTGTGTTTGTACCATAACCTTGGCTATACAAGTTTCCATATCCACAT
 
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rJMSF015O03-          GCTCCTCC                                                    
JMSF015O03+           GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
JMSF031O12+           GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
                      ____________________________________________________________
consensus             GCTCCTCCCATTGTTCCGGTAGCATCAGCACCGCCGTAGAAGGTGGCGTGGCCATTCTTC
 
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JMSF015O03+           CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
JMSF031O12+           CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
                      ____________________________________________________________
consensus             CAATCGCCGGGGGCGGAAGGATCTTCGCCACCATGGAAGAACGTCCCACAAGAGCTGTGG
 
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JMSF015O03+           AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
JMSF031O12+           AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
                      ____________________________________________________________
consensus             AAACAAAGAACAAGCACAAGGATGAAAAATGGAAAATGGAAGTTCTCCATTGAGAATAAA
 
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JMSF015O03+           CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC
JMSF031O12+           CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC
                      ____________________________________________________________
consensus             CAAGCTAGCTAGCTAGCAAAGAGTGGGTGACAATGTATATAATGCTTGTTTGAACTTACC