Contig 010768:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030O22-                                                       CATTCACCAACAAAG
                      ____________________________________________________________
consensus                                                          CATTCACCAACAAAG
 
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rJMSF030O22-          ATGAACGCTACGGCAAAATCTGCATTATTTACAACTATCCAAAAGATCTCAACAGTCTAC
                      ____________________________________________________________
consensus             ATGAACGCTACGGCAAAATCTGCATTATTTACAACTATCCAAAAGATCTCAACAGTCTAC
 
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rJMSF030O22-          AACTAGGTAGGCACACAGGCCATAAACCAACGGGAGAGCTATGCTAACAGGCACTAGACT
                      ____________________________________________________________
consensus             AACTAGGTAGGCACACAGGCCATAAACCAACGGGAGAGCTATGCTAACAGGCACTAGACT
 
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rJMSF030O22-          GCGCACTCGCCTAGACATCACCTCATTCGCTTATCCAACCAAAACAACGCTAACATAAGT
                      ____________________________________________________________
consensus             GCGCACTCGCCTAGACATCACCTCATTCGCTTATCCAACCAAAACAACGCTAACATAAGT
 
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rJMSF030O22-          TAGGCTCAACACAAAAACCAAGTTACCGGGAACCATCTTCCTTCGTCTTCTTCACGCGAT
                      ____________________________________________________________
consensus             TAGGCTCAACACAAAAACCAAGTTACCGGGAACCATCTTCCTTCGTCTTCTTCACGCGAT
 
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rJMSF030O22-          GCTACTGCTCCCGCGGGTGGAACACGGTGAGAGCCACCACCCGCGCCTACTCTACTTCGC
                      ____________________________________________________________
consensus             GCTACTGCTCCCGCGGGTGGAACACGGTGAGAGCCACCACCCGCGCCTACTCTACTTCGC
 
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rJMSF030O22-          CGGAGCTACCACGACGCCGGAGGAGGAGCTCAACGGAGGTGCGGATGTTCTGTTCAAAGG
                      ____________________________________________________________
consensus             CGGAGCTACCACGACGCCGGAGGAGGAGCTCAACGGAGGTGCGGATGTTCTGTTCAAAGG
 
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rJMSF030O22-          GGAGAAAGGTCCCCGCCTCAAGCTCTGTTCCGTCGCCGCCGATCCACCACCGTATCGCCG
                      ____________________________________________________________
consensus             GGAGAAAGGTCCCCGCCTCAAGCTCTGTTCCGTCGCCGCCGATCCACCACCGTATCGCCG
 
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rJMSF030O22-          GTTTGCTTCGCCAAAGATCGCAGCTTGCCGAAGCTCTTCCTCTTCTACCGAATGGAGGAG
JMSF030O22+                     CCAAAGATCGCAGCTTGCCGAAGCTCTTCCTCTTCTACCGAATGGAGGAG
                      ____________________________________________________________
consensus             GTTTGCTTCGCCAAAGATCGCAGCTTGCCGAAGCTCTTCCTCTTCTACCGAATGGAGGAG
 
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rJMSF030O22-          ACAACGAGGGCTTGGTCACCGGAGCTTCACCACCACCTCACCACTGTTGTTCGTTGCTGC
JMSF030O22+           ACAACGAGGGCTTGGTCACCGGAGCTTCACCACCACCTCACCACTGTTGTTCGTTGCTGC
                      ____________________________________________________________
consensus             ACAACGAGGGCTTGGTCACCGGAGCTTCACCACCACCTCACCACTGTTGTTCGTTGCTGC
 
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rJMSF030O22-          TTGGGGTACGCCGGAGGTTCGCCAAAGCCGCTACTTGCCGATGATGCTCAACACTTCTAC
JMSF019F22+                                            CTTGCCGAAGATGCTCTACACTTCTAC
JMSF004P02+                                            CTTGCCGAAGATGCTCTACACTTCTAC
JMSF030O22+           TTGGGGTACGCCGGAGGTTCGCCAAAGCCGCTACTTGCCGATGATGCTCAACACTTCTAC
                      ____________________________________________________________
consensus             TTGGGGTACGCCGGAGGTTCGCCAAAGCCGCTACTTGCCGATGATGCTCAACACTTCTAC
 
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rJMSF030O22-          AAGAGGTCACGAGAAGAGCTAA                                      
JMSF019F22+           AAGAGGTCACGAGAAGAGCTAAGGAGAAGGGGGAGGATGGGATGGCTTGATGTTGGTTGC
JMSF004P02+           AAGAGGTCACGAGAAGAGCTAAGGAGAAGGGGGAGGATGGGATGGCTTGATGTTGGTTGC
JMSF030O22+           AAGAGGTCACGAGAAGAGCTAAGGAGAA-GGGAAAGATGGGATGGCTTGATGTTGGTTGC
                      ____________________________________________________________
consensus             AAGAGGTCACGAGAAGAGCTAAGGAGAAGGGGGAGGATGGGATGGCTTGATGTTGGTTGC
 
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JMSF019F22+           AGCTTTAAACCGAGAGAGAGAGACGAAGAGGTGGGGTTGCTTGGCTGCTACAGCTTGTCG
JMSF004P02+           AGCTTTAAACCGAGAGAGAGAGACGAAGAGGTGGGGTTGCTTGGCTGCTACAGCTTGTCG
JMSF030O22+           AGCTTTAAACCGAGAGAGAGAGACGAAGAGGAGAGGTTGCTTGGCTGCTACTGCTTGTCG
                      ____________________________________________________________
consensus             AGCTTTAAACCGAGAGAGAGAGACGAAGAGGTGGGGTTGCTTGGCTGCTACAGCTTGTCG
 
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JMSF019F22+           AAGAAGGAAGAAGGAAATGAGGTTGTTTGGTTCGTTCTTGACAAAGCCAATAGGGAGAGG
JMSF004P02+           AAGAAGGAAGAAGGAAATGAGGTTGTTTGGTTCGTTCTTGACAAAGCCAATAGGGAGAGG
JMSF030O22+           AAGAAGGAAGAAGGAAATGGGGTTATTTGGTTCGTTCGTGACAAAGTCGATAGGGAGAGG
                      ____________________________________________________________
consensus             AAGAAGGAAGAAGGAAATGAGGTTGTTTGGTTCGTTCTTGACAAAGCCAATAGGGAGAGG
 
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JMSF019F22+           AGGTGCTTGAGCTAAGAACTCGGCT                                   
JMSF004P02+           AGGTGCTTGAGCTAAGAACTCGGCTGCTTGGATTATAGATGATACAATGC          
JMSF030O22+           AGGTGCTGGAGTTAAGATCTCGGCTGCTTGGATTATTGATGATACAATGCATACACACAC
                      ____________________________________________________________
consensus             AGGTGCTTGAGCTAAGAACTCGGCTGCTTGGATTATTGATGATACAATGCATACACACAC
 
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JMSF030O22+           AAGAGATGGTAGGGTTCACTCACTAGATTGGGTTTAGGTTAGATGGGTTGGGTTTAAACC
                      ____________________________________________________________
consensus             AAGAGATGGTAGGGTTCACTCACTAGATTGGGTTTAGGTTAGATGGGTTGGGTTTAAACC