| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF029B08 | Sequence | 439 | 010767 (8) | gb|EYU37746.1| | 5e-08 | hypothetical protein MIMGU_mgv1a011496mg [Erythranthe guttata] | 678 | 010767 (8) | ref|XP_009771807.1| | 9e-41 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] |
| JMSF030L12 | Sequence | 667 | 010767 (8) | ref|XP_009771807.1| | 3e-32 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] | 799 | 010767 (8) | ref|XP_009771807.1| | 2e-51 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] |
| JMSF036G21 | Sequence | 671 | 010767 (8) | ref|XP_009771807.1| | 3e-33 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] | 738 | 010767 (8) | ref|XP_009771807.1| | 6e-49 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] |
| JMSF036H21 | Sequence | 672 | 010767 (8) | ref|XP_009771807.1| | 3e-33 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] | 746 | 010767 (8) | ref|XP_009771807.1| | 6e-59 | PREDICTED: plastid division protein PDV2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF029B08- CATGTTTCTTGCTGTAAGATTGTTCATATCTCCCATGATCCCATCTCAGTTTATG
rJMSF030L12- CATGTTTCTTGCTGTAAGATTGTTCATATCTCCCATGATCCCATCTCAGTTTATG
____________________________________________________________
consensus CATGTTTCTTGCTGTAAGATTGTTCATATCTCCCATGATCCCATCTCAGTTTATG
. : . : . : . : . : . :
rJMSF036G21- CTATATACATGATGATGATATTCAGAAATCGATCACACTTCACTAAGCAAGGTA
rJMFF029B08- AAATAACTATATACATGATGATGATATTCAGAAATCGATCACACTTCACTAAGCAAGGTA
rJMSF030L12- AAATAACTATATACATGATGATGATATTCAGAAATCGATCACACTTCACTAAGCAAGGTA
rJMSF036H21- CTATATACATGATGATGATATTCAGAAATCGATCACACTTCACTAAGCAAGGTA
____________________________________________________________
consensus AAATAACTATATACATGATGATGATATTCAGAAATCGATCACACTTCACTAAGCAAGGTA
. : . : . : . : . : . :
rJMSF036G21- AAATGAAATCATCGTTTACAAATCGCGGAAGAAAAAGAATAACATTTCATCCACAACCAT
rJMFF029B08- AAATGAAATCATCGTTTACAAATCGCGGAAGAAAAAGAATAACATTTCATCCACAACCAT
rJMSF030L12- AAATGAAATCATCGTTTACAAATCGCGGAAGAAAAAGAATAACATTTCATCCACAACCAT
rJMSF036H21- AAATGAAATCATCGTTTACAAATCGCGGAAGAAAAAGAATAACATTTCATCCACAACCAT
____________________________________________________________
consensus AAATGAAATCATCGTTTACAAATCGCGGAAGAAAAAGAATAACATTTCATCCACAACCAT
. : . : . : . : . : . :
rJMSF036G21- GGTTCACATCTGGTGTGGCGACGTCAGAGTGAAATGGAACTTCAACCCTCTCCCTTACAA
rJMFF029B08- GGTTCACATCTGGTGTGGCGACGTCAGAGTGAAATGGAACTTCAACCCTCTCCCTTACAA
rJMSF030L12- GGTTCACATCTGGTGTGGCGACGTCAGAGTGAAATGGAACTTCAACCCTCTCCCTTACAA
rJMSF036H21- GGTTCACATCTGGTGTGGCGACGTCAGAGTGAAATGGAACTTCAACCCTCTCCCTTACAA
____________________________________________________________
consensus GGTTCACATCTGGTGTGGCGACGTCAGAGTGAAATGGAACTTCAACCCTCTCCCTTACAA
. : . : . : . : . : . :
rJMSF036G21- CGCATCGAGTTTCGCCATTTTCAAACACGAGCACCTTTCCAGGAGGGCATGTGGCATTCC
rJMFF029B08- CGCATCGAGTTTCGCCATTTTCAAACACGAGCACCTTTCCAGGAGGGCATGTGGCATTCC
rJMSF030L12- CGCATCGAGTTTCGCCATTTTCAAACACGAGCACCTTTCCAGGAGGGCATGTGGCATTCC
rJMSF036H21- CGCATCGAGTTTCGCCATTTTCAAACACGAGCACCTTTCCAGGAGGGCATGTGGCATTCC
____________________________________________________________
consensus CGCATCGAGTTTCGCCATTTTCAAACACGAGCACCTTTCCAGGAGGGCATGTGGCATTCC
. : . : . : . : . : . :
rJMSF036G21- TTCCTTTCTTGTCGATCCCAAACAGTTGAAACGGATTCGTAGCCTTGAGGCAGTTATCTC
rJMFF029B08- TTCCTTTCTTGTCGATCCCAAACAGTTGAAACGGATTCGTAGCCTTGAGGCAGTTATCTC
rJMSF030L12- TTCCTTTCTTGTCGATCCCAAACAGTTGAAACGGATTCGTAGCCTTGAGGCAGTTATCTC
rJMSF036H21- TTCCTTTCTTGTCGATCCCAAACAGTTGAAACGGATTCGTAGCCTTGAGGCAGTTATCTC
____________________________________________________________
consensus TTCCTTTCTTGTCGATCCCAAACAGTTGAAACGGATTCGTAGCCTTGAGGCAGTTATCTC
. : . : . : . : . : . :
rJMSF036G21- TTTTCTTAAGCCGAGGCTCAAAACCAGCGAGAGTTAGAACAGATATTAGCCCAACAACAG
rJMFF029B08- TTTTCTTAAGCCGAGGCTCAAAACCAGCGAGAGTTAGAACAGATATTAGCCCAACAACAG
rJMSF030L12- TTTTCTTAAGCCGAGGCTCAAAACCAGCGAGAGTTAGAACAGATATTAGCCCAACAACAG
rJMSF036H21- TTTTCTTAAGCCGAGGCTCAAAACCAGCGAGAGTTAGAACAGATATTAGCCCAACAACAG
____________________________________________________________
consensus TTTTCTTAAGCCGAGGCTCAAAACCAGCGAGAGTTAGAACAGATATTAGCCCAACAACAG
. : . : . : . : . : . :
rJMSF036G21- TCAATGCTGTCCTGGCAGCTACACCAATAAAACACGTTACCATTCTCGATGGACTTTTTG
rJMFF029B08- TCAATGCTGTCCTGGCAGCTACACCAATAAAACACGTTACCATTCTCGATGGACTTTTTG
rJMSF030L12- TCAATGCTGTCCTGGCAGCTACACCAATAAAACACGTTACCATTCTCGATGGACTTTTTG
rJMSF036H21- TCAATGCTGTCCTGGCAGCTACACCAATAAAACACGTTACCATTCTCGATGGACTTTTTG
____________________________________________________________
consensus TCAATGCTGTCCTGGCAGCTACACCAATAAAACACGTTACCATTCTCGATGGACTTTTTG
. : . : . : . : . : . :
rJMSF036G21- CCTCTTCTTGATGGAGATCCTTTGTCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
rJMFF029B08- CCTCTTCTTGATGGAGATCCTTTGTCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
rJMSF030L12- CCTCTTCTTGATGGAGATCCTTTGTCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
rJMSF036H21- CCTCTTCTTGATGGAGATCCTTTGTCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
JMSF036H21+ TCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
JMSF036G21+ CAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
JMSF030L12+ ATCGCCCCAT
____________________________________________________________
consensus CCTCTTCTTGATGGAGATCCTTTGTCAATTGATGCGGTTGGCTTCCATTTATCGCCCCAT
. : . : . : . : . : . :
rJMSF036G21- TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
rJMFF029B08- TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
rJMSF030L12- TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
rJMSF036H21- TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
JMSF036H21+ TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
JMSF036G21+ TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
JMSF030L12+ TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
____________________________________________________________
consensus TTTGAGAAAGCATGTGTGAGGAAGGGGGATATGAAGGATAGAGCTTGTCCGAGACTAGAG
. : . : . : . : . : . :
rJMSF036G21- GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
rJMFF029B08- GGTAAGGTTGGGTTGGGATATGGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
rJMSF030L12- GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
rJMSF036H21- GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
JMSF036H21+ GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
JMSF036G21+ GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
JMSF030L12+ GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
____________________________________________________________
consensus GGTAAGGTTGGGTTGG--ATATGGAGGGAGCAGGAGATCATTACTTTCTTCCACAGTTTC
. : . : . : . : . : . :
rJMSF036G21- ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
rJMFF029B08- ACCGACAAAAGCAATTGCCTCGT
rJMSF030L12- ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
rJMSF036H21- ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
JMSF036H21+ ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
JMSF036G21+ ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
JMSF030L12+ ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
____________________________________________________________
consensus ACCGACAAAAGCAATTGCCTCGTTTATAATGTCCAAGTTATCCCCTTTGTACTCCTTCAG
. : . : . : . : . : . :
rJMSF036G21- CTTCTTGAGCANCTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGC-TTTTCATA
rJMSF030L12- CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGC-TTTTCATA
rJMSF036H21- CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
JMSF036H21+ CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
JMFF029B08+ TGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
JMSF036G21+ CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
JMSF030L12+ CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
____________________________________________________________
consensus CTTCTTGAGCAACTTCTCTTGGGAATAGGCTATCCCGGCAAAGGCTTCAGCTTTTTCATA
. : . : . : . : . : . :
rJMSF036G21- TAGCTGTTGCTGATGCAGTGCCTGCAA
rJMSF030L12- TAGCTGTTGCTGATGCAGTGCCTGCAA
rJMSF036H21- TAGCTGTTGCTGATGCAGTGCCTGCAAAGAA
JMSF036H21+ TAGCTGTTGCTGATGCAGTGCCTGCAAAGAAGAAACTAGGACTTCAAGCTTTTCAAGAGC
JMFF029B08+ TAGCTGTTGCTGATGCAGTGCCTGCAAAGAAGAAACTAGGACTTCAAGCTTTTCAAGAGC
JMSF036G21+ TAGCTGTTGCTGATGCAGTGCCTGCAAAGAAGAAACTAGGACTTCAAGCTTTTCAAGAGC
JMSF030L12+ TAGCTGTTGCTGATGCAGTGCCTGCAAAGAAGAAACTAGGACTTCAAGCTTTTCAAGAGC
____________________________________________________________
consensus TAGCTGTTGCTGATGCAGTGCCTGCAAAGAAGAAACTAGGACTTCAAGCTTTTCAAGAGC
. : . : . : . : . : . :
JMSF036H21+ ATCTCTGATACTCAAA-AGGCAATCCGATACTTCATCTCCTGAATCCATTTCAGCGCCTC
JMFF029B08+ ATCTCTGATACTCANACGGGCAATCCGATACTTCATCTCCTGAATCCATTTCAGCGCCTC
JMSF036G21+ ATCTCTGATACTCAAA-AGGCAATCCGATACTTCATCTCCTGAATCCATTTCAGCGCCTC
JMSF030L12+ ATCTCTGATACTCAAA-AGGCAATCCGATACTTCATCTCCTGAATCCATTTCAGCGCCTC
____________________________________________________________
consensus ATCTCTGATACTCAAA-AGGCAATCCGATACTTCATCTCCTGAATCCATTTCAGCGCCTC
. : . : . : . : . : . :
JMSF036H21+ CTTTCCTTAATTCTCTTCCTTCCGTTCTATCAGCAGCAATGCAATTAGTGATCTTCGACC
JMFF029B08+ CTTTCCTTAATTCTCTTCCTTCCGTTCTATCAGCAGCAATGCAATTAGTGATCTTCGACC
JMSF036G21+ CTTTCCTTAATTCTCTTCCTTCCGTTCTATCAGCAGCAATGCAATTAGTGATCTTCGACC
JMSF030L12+ CTTTCCTTAATTCTCTTCCTTCCGTTCTATCAGCAGCAATGCAATTAGTGATCTTCGACC
____________________________________________________________
consensus CTTTCCTTAATTCTCTTCCTTCCGTTCTATCAGCAGCAATGCAATTAGTGATCTTCGACC
. : . : . : . : . : . :
JMSF036H21+ TCAATTCTGTTATTCTGGCCAACACCATCTCTATTCTACCTTCCTCCATCTCTTTCACCC
JMFF029B08+ TCAATTCTGTTATTCTGGCNAACACCATCTCTATTCTACCTTCCTCCATCTCTTTCACCC
JMSF036G21+ TCAATTCTGTTATTCTGGCCAACACCATCTCTATTCTACCTTCCTCCATCTCTTTCACCC
JMSF030L12+ TCAATTCTGTTATTCTGGCCAACACCATCTCTATTCTACCTTCCTCCATCTCTTTCACCC
____________________________________________________________
consensus TCAATTCTGTTATTCTGGCCAACACCATCTCTATTCTACCTTCCTCCATCTCTTTCACCC
. : . : . : . : . : . :
JMSF036H21+ TCTCTGAATTTGGGTTTTCAGTTGCGGCGTTCGTGAAAAGGGCCAAGAAGTTCCAAAAAG
JMFF029B08+ TCTCTGAATTTGGGTTTTCAGTTGCGGCGTTCGTGAAAAGGGCCAAGAAGTTCCAAAAAG
JMSF036G21+ TCTCTGAATTTGGGTTTTCAGTTGCGGCGTTCGTGAAAAGGGCCAAGAAGTTCCAAAAAG
JMSF030L12+ TCTCTGAATTTGGGTTTTCAGTTGCGGCGTTCGTGAAAAGGGCCAAGAAGTTCCAAAAAG
____________________________________________________________
consensus TCTCTGAATTTGGGTTTTCAGTTGCGGCGTTCGTGAAAAGGGCCAAGAAGTTCCAAAAAG
. : . : . : . : . : . :
JMSF036H21+ GAGAAGTCTTTGGAGGGTTTACAGTTTGAAACAAGTGATTGTGGTTCTTTCTTCACTCTA
JMFF029B08+ GAGAAGTCTTTGGAGGGTTTACAGTTTGAAACAAGTGATTGTGGTTCTTTCTTCACTCTA
JMSF036G21+ GAGAAGTCTTTGGAGGGTTTACAGTTTGAAACAAGTGATTGTGGTTCTTTCTTCACTCTA
JMSF030L12+ GAGAAGTCTTTGGAGGGTTTACAGTTTGAAACAAGTGATTGTGGTTCTTTCTTCACTCTA
____________________________________________________________
consensus GAGAAGTCTTTGGAGGGTTTACAGTTTGAAACAAGTGATTGTGGTTCTTTCTTCACTCTA
. : . : . : . : . : . :
JMSF036H21+ CAAAGGGTAGAAAACAAGAAGTTGTGTAGCCCAGCAGC
JMFF029B08+ CAAAGGGTAGAAAACAAGAAGTTGTGTAGCCCAGCAGC
JMSF036G21+ CAAAGGGTAGAAAACAAGAAGTTGTGTAGCCCAGCAGC
JMSF030L12+ CAAAGGGTAGAAAACAAGAAGTTGTGTAGCCCAGCAGCAACTCTGCAAGGCAAATATGTC
____________________________________________________________
consensus CAAAGGGTAGAAAACAAGAAGTTGTGTAGCCCAGCAGCAACTCTGCAAGGCAAATATGTC