Contig 010764:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS036H10Sequence299010764 (4)ref|XP_009620829.1|9e-24PREDICTED: ABC transporter B family member 25, mitochondrial [Nicotiana tomento
JMFS118C09Sequence627010764 (4)ref|XP_009620829.1|7e-39PREDICTED: ABC transporter B family member 25, mitochondrial [Nicotiana tomento
JMFS128E10Sequence625010764 (4)ref|XP_009620829.1|6e-37PREDICTED: ABC transporter B family member 25, mitochondrial [Nicotiana tomento
JMSF030J15Sequence674010764 (4)ref|XP_009620829.1|8e-26PREDICTED: ABC transporter B family member 25, mitochondrial [Nicotiana tomento766019351ref|XP_008344793.1|4e-107PREDICTED: ABC transporter B family member 25, mitochondrial-like [Malus domest

Alignment

This contig is upended


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JMSF030J15+                                                         TAAACAGAAAAGGA
                      ____________________________________________________________
consensus                                                           TAAACAGAAAAGGA
 
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JMFS036H10+                                                          CACCACTGTCAAC
JMSF030J15+           ACTTGAACATTCAGTACCTTGGCCCCAACTAATAGACCTAAAGCGGCCACCACTCTCAAC
                      ____________________________________________________________
consensus             ACTTGAACATTCAGTACCTTGGCCCCAACTAATAGACCTAAAGCGGCCACCACTGTCAAC
 
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JMFS036H10+           CGGAACTCGAGATTATCGTTCATCCACAGGTATTTTGCGAGAGTGCCTATAATTCTTGTG
JMSF030J15+           CGGAACTCCAGATTATCCTTCATCCACAGGTATTTTGCGAGAGTGCCTATAATTCTTGTG
                      ____________________________________________________________
consensus             CGGAACTCGAGATTATCGTTCATCCACAGGTATTTTGCGAGAGTGCCTATAATTCTTGTG
 
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JMFS036H10+           TCGTTTATTTGATTGCCCGAGCCTTCTTTGACAATTTTCCCAGACTGCTCTTGCTTAACA
JMSF030J15+           TCGTTTATTTGATTGCCCGAGCCTTCTTTGACAATTTTCCCAGACTGCTCTTGCTTAACA
                      ____________________________________________________________
consensus             TCGTTTATTTGATTGCCCGAGCCTTCTTTGACAATTTTCCCAGACTGCTCTTGCTTAACA
 
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JMFS128E10+                                       AGGGTCTTGGGGGTTTTTGGGTGGGAAATCAG
JMFS118C09+                                       AGGGTCTTGGGGGTTTTTGGGTGGGAAATCAG
JMFS036H10+           GGTGGCTTTTTGCCCAATGCACCACCAT                                
JMSF030J15+           GGTGGCTTTTTGCCCAATGCACCACCATAGGGTCTTGGGGGTTTTTGGGTGGGAAATCAG
                      ____________________________________________________________
consensus             GGTGGCTTTTTGCCCAATGCACCACCATAGGGTCTTGGGGGTTTTTGGGTGGGAAATCAG
 
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JMFS128E10+           AAAGAAAGGCATTGACTTGTCCCAAGGAAGAGGGGCAAGCGGTTCTTGTAGACCCCCAGA
JMFS118C09+           AAAGAAAGGCATTGACTTGTCCCAAGGAAGAGGGGCAAGCGGTTCTTGTAGACCCCCAGA
JMSF030J15+           AAAGAAAGGCATTGACTTGTCCCAAGGAAGAGGGGCAAGCGGTTCTTGTAGACCCCCAGA
                      ____________________________________________________________
consensus             AAAGAAAGGCATTGACTTGTCCCAAGGAAGAGGGGCAAGCGGTTCTTGTAGACCCCCAGA
 
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JMFS128E10+           GGCTTCGTCTGGTGGAAAGCCGTCTGGAGAAAACGGCATATCGATTAATGTGAGCAATTC
JMFS118C09+           GGCTTCGTCTGGTGGAAAGCCGTCTGGAGAAAACGGCATATCGATTAATGTGAGCAATTC
JMSF030J15+           GGCTTCGTCTGGTGGAAAGCCGTCTGGAGAAAACGGCATATCGATTAATGTGAGCAATTC
                      ____________________________________________________________
consensus             GGCTTCGTCTGGTGGAAAGCCGTCTGGAGAAAACGGCATATCGATTAATGTGAGCAATTC
 
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JMFS128E10+           GAAGAGAGCTGGCGCAGTTGGGCGACTGCAGATGCACCGAGCGGGATGGAACGTAATTCA
JMFS118C09+           GAAGAGAGCTGGCGCAGTTGGGCGACTGCAGATGCACCGAGCGGGATGGAACGTAATTCA
JMSF030J15+           GAAGAGAGCTGGCGCAGTTGGGCGACTGCAGATGCACCGAGCGGGATGGAACGTAATTCA
                      ____________________________________________________________
consensus             GAAGAGAGCTGGCGCAGTTGGGCGACTGCAGATGCACCGAGCGGGATGGAACGTAATTCA
 
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JMFS128E10+           AAATCAAGGACTCTGCTTTGGGGAAGAAGAGCTCGCTAGCCCTAAAACACCTGGAAGCCA
JMFS118C09+           AAATCAAGGACTCTGCTTTGGGGAAGAAGAGCTCGCTAGCCCTAAAACACCTGGAAGCCA
JMSF030J15+           AAATCAAGGACTCTGCTTTGGGGAAGAAGAGCTCGCTAGCCCTAAAACACCTGGAAGCCA
                      ____________________________________________________________
consensus             AAATCAAGGACTCTGCTTTGGGGAAGAAGAGCTCGCTAGCCCTAAAACACCTGGAAGCCA
 
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JMFS128E10+           TCGAATTTCTCAAGAAACTGGAAACCCAGTCGATGAATTAGGCAAACAACTCCTCCAGTC
JMFS118C09+           TCGAATTTCTCAAGAAACTGGAAACCCAGTCGATGAATTAGGCAAACAACTCCTCCAGTC
JMSF030J15+           TCGAATTTCTCAAGAAACTGGAAACCCAGTCGATGAATTAGGCAAACAACTCCTCCAGTC
                      ____________________________________________________________
consensus             TCGAATTTCTCAAGAAACTGGAAACCCAGTCGATGAATTAGGCAAACAACTCCTCCAGTC
 
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JMFS128E10+           CCGAGCTAGAATATAATAGAATCTCTATCTGCGCCGGCGGTTACGACAGGCGGCCGTACA
JMFS118C09+           CCGAGCTAGAATATAATAGAATCTCTATCTGCGCCGGCGGTTACGACAGGCGGCCGTACA
JMSF030J15+           CCGAGCTAGAATATAATAGAATCTCTATCTGCGCCGGCGGTTACGACAGGCGGCCGTACA
                      ____________________________________________________________
consensus             CCGAGCTAGAATATAATAGAATCTCTATCTGCGCCGGCGGTTACGACAGGCGGCCGTACA
 
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JMFS128E10+           TACACAGACAAATCCTCCTTTGCGTCAACTTGTAGTT                       
JMFS118C09+           TACACAGACAAATCCTCCTTTGCGTCAACTTGTAGTT                       
JMSF030J15+           TACACAGACAAATCCTCCTTTGCGTCAACTTGTAGTTGTGTTCCTTCACGACTTCACCCT
                      ____________________________________________________________
consensus             TACACAGACAAATCCTCCTTTGCGTCAACTTGTAGTTGTGTTCCTTCACGACTTCACCCT