Contig 010762:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035H22Sequence536010762 (2)661005524 (7)ref|XP_009591201.1|1e-76PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Nicotiana tomentosifo
JMSF030I21Sequence669010762 (2)ref|XP_009588089.1|6e-18PREDICTED: LOW QUALITY PROTEIN: probable tyrosine--tRNA ligase, mitochondrial [521005524 (7)ref|XP_004242803.1|6e-51PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF030I21+                                                              TCAGCCGTC
                      ____________________________________________________________
consensus                                                                TCAGCCGTC
 
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JMSF030I21+           GGTCAAACCCACAATAGACTTTGAGGGGTGGGAGATTCGGATCGGAGCAAATTGAACGGA
                      ____________________________________________________________
consensus             GGTCAAACCCACAATAGACTTTGAGGGGTGGGAGATTCGGATCGGAGCAAATTGAACGGA
 
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JMSF030I21+           GGTTTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCACCACGTTCC
                      ____________________________________________________________
consensus             GGTTTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCACCACGTTCC
 
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JMFF035H22+              TTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGGGAATAAACT
JMSF030I21+           GCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGGGAATAAACT
                      ____________________________________________________________
consensus             GCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGGGAATAAACT
 
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JMFF035H22+           GGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGCGGCGGTGAG
JMSF030I21+           GGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGCGGCGGTGAG
                      ____________________________________________________________
consensus             GGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGCGGCGGTGAG
 
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JMFF035H22+           AAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCCTATGGGCGC
JMSF030I21+           AAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCCTATGGGCGC
                      ____________________________________________________________
consensus             AAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCCTATGGGCGC
 
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JMFF035H22+           CATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTGCACACTAAA
JMSF030I21+           CATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTGCACACTAAA
                      ____________________________________________________________
consensus             CATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTGCACACTAAA
 
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JMFF035H22+           GAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCTTAAGTTATG
JMSF030I21+           GAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCTTAAGTTATG
                      ____________________________________________________________
consensus             GAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCTTAAGTTATG
 
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JMFF035H22+           ATGTTGAACCAGTTATACACGGCGGAGAGCAGCAGGTTCACACGGTGAAGGAGAGCGGCG
JMSF030I21+           ATGTTGAACCAGTTATACACGGCGGAGAGCAGCAGGTTCACACGGTGAAGGAGAGCGGCG
                      ____________________________________________________________
consensus             ATGTTGAACCAGTTATACACGGCGGAGAGCAGCAGGTTCACACGGTGAAGGAGAGCGGCG
 
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JMFF035H22+           GCGGGCAGCGGCTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTGCTGACC
JMSF030I21+           GCGGGCAGCGGCTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTGCTGACC
                      ____________________________________________________________
consensus             GCGGGCAGCGGCTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTGCTGACC
 
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JMFF035H22+           GGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGAAGCGGT
JMSF030I21+           GGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGAAGCGGT
                      ____________________________________________________________
consensus             GGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGAAGCGGT
 
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JMFF035H22+           GAAGCAGCGACTCC                                              
JMSF030I21+           GAAGCAGCGACTCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAACTGCTATCTAATCTC
                      ____________________________________________________________
consensus             GAAGCAGCGACTCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAACTGCTATCTAATCTC