Contig 010761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030G15Sequence502010761 (4)ref|XP_006360296.1|8e-81PREDICTED: probable F-actin-capping protein subunit beta-like [Solanum tuberosu111010761 (4)dbj|BAC42847.1|8e-11unknown protein [Arabidopsis thaliana]
JMSF030H15Sequence668010761 (4)emb|CDP01140.1|8e-121unnamed protein product [Coffea canephora]751010761 (4)emb|CDP01140.1|8e-96unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030H15- ACAAAAGTTTGAACCAATATATTCAATCTTTCAATTCTTACTCAAAAACTAGC
                      ____________________________________________________________
consensus ACAAAAGTTTGAACCAATATATTCAATCTTTCAATTCTTACTCAAAAACTAGC
 
. : . : . : . : . : . :
rJMSF030H15- ATATCCAAGAAACTCACAAATTATAAAAGGTAGATTGCTGTTCAACAACATATAAACGGA
                      ____________________________________________________________
consensus ATATCCAAGAAACTCACAAATTATAAAAGGTAGATTGCTGTTCAACAACATATAAACGGA
 
. : . : . : . : . : . :
rJMSF030H15- TAGGATTCAAGTACTCTTGTGGCTCCGGGCCTGAATTCATAATTGGAAGAACAAGAATAA
                      ____________________________________________________________
consensus TAGGATTCAAGTACTCTTGTGGCTCCGGGCCTGAATTCATAATTGGAAGAACAAGAATAA
 
. : . : . : . : . : . :
rJMSF030H15- ATTCCTTCACTGTAGAAGCACAACCCCTTCAATATGAATAGCAGAACAAACAAATCTGGA
                      ____________________________________________________________
consensus ATTCCTTCACTGTAGAAGCACAACCCCTTCAATATGAATAGCAGAACAAACAAATCTGGA
 
. : . : . : . : . : . :
rJMSF030H15- AATGTATTTTTATTAATACTGATCAATGGAGATGGCATGTATATCTTATCTTAGCTCGAA
                      ____________________________________________________________
consensus AATGTATTTTTATTAATACTGATCAATGGAGATGGCATGTATATCTTATCTTAGCTCGAA
 
. : . : . : . : . : . :
rJMSF030G15- GTTTCATTTGCACCANTTCANATGGAGGGCGTAAAATACAGACCATTTCCTTTGTN
rJMSF030H15- GGCAGTTTCATTTGCACCAGTTCAGATGGAGGGCGTAAAATACAGACCATTTCCTTTGTC
                      ____________________________________________________________
consensus GGCAGTTTCATTTGCACCAGTTCAGATGGAGGGCGTAAAATACAGACCATTTCCTTTGTC
 
. : . : . : . : . : . :
rJMSF030G15- TTTCCNAAATAAACCTGATCAAGGGAGTTCCTAAGTTTGCCCTCCNTTTCCTCAA
rJMSF030H15- TTTCCAAAATAAACCTGATCAAGGGAGTTCCTAAGTTTGCCCTCCATTTCCTCAATCATC
JMSF030H15+ CAATCATC
                      ____________________________________________________________
consensus TTTCCAAAATAAACCTGATCAAGGGAGTTCCTAAGTTTGCCCTCCATTTCCTCAATCATC
 
. : . : . : . : . : . :
rJMSF030H15- CTTCCCATGTTGCATAAATGACCCTCCGAGAGAGGGAATTGCATATTCATCTGTCTTCTT
JMSF030H15+ CTTCCCATGGTGCATAAATGACCCTCCGAGAGAGGGAATTGCATATTCATCTGTCTTCTT
                      ____________________________________________________________
consensus CTTCCCATGTTGCATAAATGACCCTCCGAGAGAGGGAATTGCATATTCATCTGTCTTCTT
 
. : . : . : . : . : . :
rJMSF030H15- ATCGATCCTGTCAAATTGAAGGTGCCTGAGGACTCATTATTTGTGGTCAAAGATAGCATC
JMSF030H15+ ATCGATCCTGTCAAATTGAAGGTGCCTGAGGACTCATTATTTGTGGTCAAAGATAGCATC
                      ____________________________________________________________
consensus ATCGATCCTGTCAAATTGAAGGTGCCTGAGGACTCATTATTTGTGGTCAAAGATAGCATC
 
. : . : . : . : . : . :
rJMSF030H15- ACAGTACTAGTCAGGCAGTAGTGTGCTGTCCCTTCTTCCTCTGGACCAACCTGGATAACA
JMSF030H15+ ACAGTACTAGTCAGGCAGTAGTGTGCTGTCCCTTCTTCCTCTGGACCAACCTGGATAACA
JMSF030G15+ CTCTGGACCAACCTGGATAACA
                      ____________________________________________________________
consensus ACAGTACTAGTCAGGCAGTAGTGTGCTGTCCCTTCTTCCTCTGGACCAACCTGGATAACA
 
. : . : . : . : . : . :
rJMSF030H15- TGTATAGCATCCCAGGCTCCTTCCTGCAGATATCCCCTTCTACCATGTCCAGATTTTGAG
JMSF030H15+ TGTATAGCATCCCAGGCTCCTTCCTGCAGATATCCCCTTCTACCATGTCCAGATTTTGAG
JMSF030G15+ TGTATAGCATCCCAGGCTCCTTCCTGCAGATATCCCCTTCTACCATGTCCAGATTTTGAG
                      ____________________________________________________________
consensus TGTATAGCATCCCAGGCTCCTTCCTGCAGATATCCCCTTCTACCATGTCCAGATTTTGAG
 
. : . : . : . : . : . :
rJMSF030H15- CCATCTTTCTTTATTAAGAAGCAGGCAATGAAGCCTTCATGTTCATCTTCCCACATGTAA
JMSF030H15+ CCATCTTTCTTTATTAAGAAGCAGGCAATGAAGCCTTCATGTTCATCTTCCCACATGTAA
JMSF030G15+ CCATCTTTCTTTATTAAGAAGCAGGCAATGAAGCCTTCATGTTCATCTTCCCACATGTAA
                      ____________________________________________________________
consensus CCATCTTTCTTTATTAAGAAGCAGGCAATGAAGCCTTCATGTTCATCTTCCCACATGTAA
 
. : . : . : . : . : . :
rJMSF030H15- ACTGATGAAATGCCACCTTCATAATACTGGTCACGATA
JMSF030H15+ ACTGATGAAATGCCACCTTCATAATACTGGTCACGATAAACAGCAAAGACTTCATTTGCT
JMSF030G15+ ACTGATGAAATGCCACCTTCATAATACTGGTCACGATAAACAGCAAAGACTTCATTTGCT
                      ____________________________________________________________
consensus ACTGATGAAATGCCACCTTCATAATACTGGTCACGATAAACAGCAAAGACTTCATTTGCT
 
. : . : . : . : . : . :
JMSF030H15+ TCAATTTCAAGTTTCCTCAACTCTGCAGATGGATAAGCTCCATCTTCTAGTGGTGGATGA
JMSF030G15+ TCAATTTCAAGTNTCCTCAACTNTGCAGATGGATAAGCTCCATCTTCTAGTGGTGGATGA
                      ____________________________________________________________
consensus TCAATTTCAAGTTTCCTCAACTCTGCAGATGGATAAGCTCCATCTTCTAGTGGTGGATGA
 
. : . : . : . : . : . :
JMSF030H15+ TACGTATTTGACAAAGGCGACCTATAGGAGTCAGCATCTCTGTTATATTCACACAATATG
JMSF030G15+ TACGTATNTGACAAAGGCGACCTATAGGAGTCAGCATCTCTGTTATATTCACACAATATG
                      ____________________________________________________________
consensus TACGTATTTGACAAAGGCGACCTATAGGAGTCAGCATCTCTGTTATATTCACACAATATG
 
. : . : . : . : . : . :
JMSF030H15+ AATTCCTTTCCGGTTTCCATATCAACCATAACCTGGAGAGGCTGATCGACCTGAGAGAGG
JMSF030G15+ AATTCCTTTCCGGTTTCCATATCAACCATAACCTGGAGAGGCTGATCGACNTGAGAGAGG
                      ____________________________________________________________
consensus AATTCCTTTCCGGTTTCCATATCAACCATAACCTGGAGAGGCTGATCGACCTGAGAGAGG
 
. : . : . : . : . : . :
JMSF030H15+ AGATCTGATGAGTGGTCCGGCAAGAGGCTGAGCAAAGCAGAGAGAGCCGTCTCCATGCGC
JMSF030G15+ AGATNTGATGAGTGGTCCGGCAAGAGGCTGAGCAAAGCAGAGAGAGCCGTCTCCATGCGC
                      ____________________________________________________________
consensus AGATCTGATGAGTGGTCCGGCAAGAGGCTGAGCAAAGCAGAGAGAGCCGTCTCCATGCGC
 
. : . : . : . : . : . :
JMSF030H15+ TTAGGCGGCATTCTTCTCATCAATCCCAGCGCTGCCTCCATTCTTCTTTTTTCACTCTCC
JMSF030G15+ TTNGGCGGCATTCTTNTCATCAATNCCAGCGCTGCCTCCATTCTTCTTTTTTCACTCTCC
                      ____________________________________________________________
consensus TTAGGCGGCATTCTTCTCATCAATCCCAGCGCTGCCTCCATTCTTCTTTTTTCACTCTCC