Contig 010759:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003P13Sequence243010759 (3)721012507 (2)ref|XP_006364337.1|9e-54PREDICTED: chloride channel protein CLC-e-like isoform X1 [Solanum tuberosum]
JMSF030E19Sequence614010759 (3)ref|XP_009758606.1|2e-07PREDICTED: chloride channel protein CLC-e isoform X1 [Nicotiana sylvestris]370018251
JMSF034B22Sequence714010759 (3)emb|CAN72098.1|1e-31hypothetical protein VITISV_002674 [Vitis vinifera]618012507 (2)ref|XP_004231107.2|6e-29PREDICTED: chloride channel protein CLC-e isoform X1 [Solanum lycopersicum] ref

Alignment

This contig is upended


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JMSF034B22+           AGTAAAGAATTTCGGGATATGCCAATGCTATAAGCCCAACAGAAACCCCACCAACTATAG
                      ____________________________________________________________
consensus             AGTAAAGAATTTCGGGATATGCCAATGCTATAAGCCCAACAGAAACCCCACCAACTATAG
 
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JMSF034B22+           GGAAAACTGATTTTGGTGGGTCAATGGTCTGTTGGATATTGTTGACTGCAAGAAACATAA
                      ____________________________________________________________
consensus             GGAAAACTGATTTTGGTGGGTCAATGGTCTGTTGGATATTGTTGACTGCAAGAAACATAA
 
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JMSF034B22+           GAGACGTGCACCTAGATAATGCCACTGAAACGAATCCACAGAGAATACCAAGCAAAAGAT
                      ____________________________________________________________
consensus             GAGACGTGCACCTAGATAATGCCACTGAAACGAATCCACAGAGAATACCAAGCAAAAGAT
 
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JMSF034B22+           AAAGCGGTAACTCAGTTGGAGAATGAAAATCATAATCAGGGATTGCAAAGGCAGGTTCAG
                      ____________________________________________________________
consensus             AAAGCGGTAACTCAGTTGGAGAATGAAAATCATAATCAGGGATTGCAAAGGCAGGTTCAG
 
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JMSF034B22+           ACCCTAAGCCTATTTCTGACACTACAGAAGCTACCACAGCACTGAGAATGACCATTGAGG
                      ____________________________________________________________
consensus             ACCCTAAGCCTATTTCTGACACTACAGAAGCTACCACAGCACTGAGAATGACCATTGAGG
 
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JMSF034B22+           TTGTATTTGTTAATGATAATGATGATTCTGAAGGTGATGGCCACAAAACTGATTCTACAG
                      ____________________________________________________________
consensus             TTGTATTTGTTAATGATAATGATGATTCTGAAGGTGATGGCCACAAAACTGATTCTACAG
 
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JMSF034B22+           CAAAAAAACAACCCGCCACAGCAGCATTGAAACCGCAATATTGAAGAGTACAACGCAGAT
JMSF030E19+                                          ACCGCAATATTGAAGAGTACAACGCAGAT
                      ____________________________________________________________
consensus             CAAAAAAACAACCCGCCACAGCAGCATTGAAACCGCAATATTGAAGAGTACAACGCAGAT
 
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JMSF003P13+                                                             CTGTGATCAT
JMSF034B22+           ACCGGTAAAAAGACCGACAAAGCAGGCCGAAACTATAGCGATGTTTCCTTCTGTGATCAT
JMSF030E19+           ACCGGTAAAAAGACCGACAAAGCAGGCCGAAACTATAGCGATGTTTCCTTCTGTGATCAT
                      ____________________________________________________________
consensus             ACCGGTAAAAAGACCGACAAAGCAGGCCGAAACTATAGCGATGTTTCCTTCTGTGATCAT
 
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JMSF003P13+           GCTCTCTAGCATGGCAACAGAGCTTTTCGGATGATCATAGTTCTCCACTTCGCCTCCTAG
JMSF034B22+           GCTCTCTAGCATGGCAACAGAGCTTTTCGGATGATCATAGTTCTCCGCTTCGCCTCCTAG
JMSF030E19+           GCTCTCTAGCATGGCAACAGAGCTTTTCGGATGATCATAGTTCTCCGCTTCGCCTCCTAG
                      ____________________________________________________________
consensus             GCTCTCTAGCATGGCAACAGAGCTTTTCGGATGATCATAGTTCTCCGCTTCGCCTCCTAG
 
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JMSF003P13+           CATTGTCTGTGGTTTTGTAGGGTTTTGATCATCGCTACCGCCAAAATGTCCGGGGCCAGA
JMSF034B22+           CATTGTCTGTGGTTTTGTAGGGTTTTGATCATCGCTACCGCCAAAATGTCCGGGGCCAGA
JMSF030E19+           CATTGTCTGTGGTTTTGTAGGGTTTTGATCATCGCTACCGCCAAAATGTCCGGGGCCAGA
                      ____________________________________________________________
consensus             CATTGTCTGTGGTTTTGTAGGGTTTTGATCATCGCTACCGCCAAAATGTCCGGGGCCAGA
 
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JMSF003P13+           AGCTCGGAGCCGGAGCCGGAGCCGGGAATAAGATACCGTACGACAGTATGCATCCACTGT
JMSF034B22+           AGCTCGGAGCCGGAGCCGGAGCCGGGAATAAGATACCGTACGACAGTATGCATCCACTGT
JMSF030E19+           AGCTCGGAGCCGGAGCCGGAGCCGGGAATAAGATACCGTACGACAGTATGCATCCACTGT
                      ____________________________________________________________
consensus             AGCTCGGAGCCGGAGCCGGAGCCGGGAATAAGATACCGTACGACAGTATGCATCCACTGT
 
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JMSF003P13+           TCCGTAGCTGAATGGAGGAATGGGGTGAGAGACGCCATTGCAGAAAGACAC         
JMSF034B22+           TCCGTAGCTGAATGGAGGAATGGGGTGAGAGACTCCATTGCAGAAAGACAC         
JMSF030E19+           TCCGTAGCTGAATGGAGGAATGGGGTGAGAGACTCCATTGCAGAAAGACACAAAGGTTTG
                      ____________________________________________________________
consensus             TCCGTAGCTGAATGGAGGAATGGGGTGAGAGACTCCATTGCAGAAAGACACAAAGGTTTG
 
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JMSF030E19+           GCGAGGAACTGTGGAGGACTTGAGATGCGAGATAGGATGAGGTGGGGCACTCCCTCAACC
                      ____________________________________________________________
consensus             GCGAGGAACTGTGGAGGACTTGAGATGCGAGATAGGATGAGGTGGGGCACTCCCTCAACC