Contig 010758:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016I22Sequence579010758 (4)ref|XP_009779293.1|4e-40PREDICTED: MLO-like protein 9 [Nicotiana sylvestris]726012307 (3)ref|XP_009586729.1|4e-63PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]
JMFF024K01Sequence509010758 (4)ref|XP_009586729.1|1e-37PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]752012307 (3)ref|XP_009586729.1|3e-67PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]
JMSF014D10Sequence207010758 (4)807012307 (3)ref|XP_009586729.1|4e-81PREDICTED: MLO-like protein 9 [Nicotiana tomentosiformis]
JMSF030E11Sequence501010758 (4)ref|XP_004245231.1|1e-08PREDICTED: MLO-like protein 9 [Solanum lycopersicum]617008376 (36)ref|XP_008384431.1|2e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]

Alignment

This contig is upended


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JMFF016I22+                  CTGTCAGCTGATAAAAGTCTATGTTCATACCACAGAAGCCTTCTATGGTGTCC
                      ____________________________________________________________
consensus                    CTGTCAGCTGATAAAAGTCTATGTTCATACCACAGAAGCCTTCTATGGTGTCC
 
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JMFF024K01+                            CGTGTATAGGATACTTAGCAGGGCATGGCAACATAGTGTTGGC
JMFF016I22+           CTCTTCGTGTCCCCCTTCGTGTATAGGATACTTAGCAGGGCATGGCAACATAGTGTTGGC
                      ____________________________________________________________
consensus             CTCTTCGTGTCCCCCTTCGTGTATAGGATACTTAGCAGGGCATGGCAACATAGTGTTGGC
 
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JMFF024K01+           AGCAGTTGCAGGAATGCAAATCTTAGCAATGTAATTCTGACCAAATGTTAAGAGGAGGGA
JMFF016I22+           AGCAGTTGCAGGAATGCAAATCTTAGCAATGTAATTCTGACCAAATGTTAAGAGGAGGGA
                      ____________________________________________________________
consensus             AGCAGTTGCAGGAATGCAAATCTTAGCAATGTAATTCTGACCAAATGTTAAGAGGAGGGA
 
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JMFF024K01+           AATAAATCCCAGAACCATGAGCTCACCCTTAATCTTCTGCAAAGCTTCATACAGTGCTCT
JMFF016I22+           AATAAATCCCAGAACCATGAGCTCACCCTTAATCTTCTGCAAAGCTTCATACAGTGCTCT
JMSF030E11+                                                                  GCTCT
                      ____________________________________________________________
consensus             AATAAATCCCAGAACCATGAGCTCACCCTTAATCTTCTGCAAAGCTTCATACAGTGCTCT
 
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JMFF024K01+           CTTTCGTTTTCTCTCAAAGGTCGATCCAACTGAATGAAGAAATTTCTCTAAGAGTATAGA
JMFF016I22+           CTTTCGTTTTCTCTCAAAGGTCGATCCAACTGAATGAAGAAATTTCTCTAAGAGTATAGA
JMSF030E11+           CTTTCGTTTTCTCTCAAAGGTCGATCCAACTGAATGAAGAAATTTCTCTAAGAGTATAGA
                      ____________________________________________________________
consensus             CTTTCGTTTTCTCTCAAAGGTCGATCCAACTGAATGAAGAAATTTCTCTAAGAGTATAGA
 
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JMFF024K01+           AATGATAATGATGACTACACAGACCAATGCTACTGCCCATGTGGGTGTCTGGTCCAGTTC
JMFF016I22+           AATGATAATGATGACTACACAGACCAATGCTACTGCCCATGTGGGTGTCTGGTCCAGTTC
JMSF030E11+           AATGATAATGATGACTACACAGACCAATGCTACTGCCCATGTGGGTGTCTGGTCCAGTTC
                      ____________________________________________________________
consensus             AATGATAATGATGACTACACAGACCAATGCTACTGCCCATGTGGGTGTCTGGTCCAGTTC
 
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JMFF024K01+           CCTTTCAGAAGCTCCTCCTCCTCCTGCCATTTTAAATTGTTCCTTTTCCTATTCCCTAAT
JMFF016I22+           CCTTTCAGAAGCTCCTCCTCCTCCTGCCATTTTAAATTGTTCCTTTTCCTATTCCCTAAT
JMSF014D10+                               CTCCTGCCATTTTAAATTGTTCCTTTTCCTATTCCCTAAT
JMSF030E11+           CCTTTCAGAAGCTCCTCCTCCTCCTGCCATTTTAAATTGTTCCTTTTCCTATTCCNTAAT
                      ____________________________________________________________
consensus             CCTTTCAGAAGCTCCTCCTCCTCCTGCCATTTTAAATTGTTCCTTTTCCTATTCCCTAAT
 
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JMFF024K01+           CCTAAAATTACTCAATCCAATAGGATAGGAGCACCACCTTCCCCAGGGGTAGGATACGGT
JMFF016I22+           CCTAAAATTACTCAATCCAATAGGATAGGAGCACCACCTTCCCCAGGGGTAGGATACGGT
JMSF014D10+           CCTAAAATTACTCAATCCAATAGGATAGGAGCACCACCTTCCCCAGGGGTAGGATACGGT
JMSF030E11+           CCTAAAATTACTCAATCCAATAGGATAGGAGCACCACCTTCCCCAGGGGTAGGATACGGT
                      ____________________________________________________________
consensus             CCTAAAATTACTCAATCCAATAGGATAGGAGCACCACCTTCCCCAGGGGTAGGATACGGT
 
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JMFF024K01+           ACGGTGCTGCACTTTTGGAAAATAATCAAACACCTTGGGCGCAGCCAAAAGTGCAGAGGG
JMFF016I22+           ACGGTGCTGCACTTTTGGAAAATAATCAAACACCTTGGGCGCAGCCAAAAGTGCAGAGGG
JMSF014D10+           ACGGTGCTGCACTTTTGGAAAATAATCAAACACCTTGGGCGCAGCCAAAAGTGCAGAGGG
JMSF030E11+           ACGGTGCTGCACTTTTGGAAAATAATCAAACACCTTGGGCGCAGCCAAAAGTGCAGAGGG
                      ____________________________________________________________
consensus             ACGGTGCTGCACTTTTGGAAAATAATCAAACACCTTGGGCGCAGCCAAAAGTGCAGAGGG
 
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JMFF024K01+           ACCGACCAGCGCCCGGGTACCGGTGGCTCTGGATTTGGATTGGG                
JMFF016I22+           ACCGACCAGCGCCCGGGTACCGGTGGCTCTGGATTTGGATTGGG                
JMSF014D10+           ACCGACCAGCGCCCGGGTACCGGTGGCTCTGGATTTGGATTGGG                
JMSF030E11+           ACCGACCAGCGCCCGGGTACCGGTGGCTCTGGATNTGGATTGGGCCAAACTCCATTGCAA
                      ____________________________________________________________
consensus             ACCGACCAGCGCCCGGGTACCGGTGGCTCTGGATTTGGATTGGGCCAAACTCCATTGCAA
 
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JMSF030E11+           ACCTGCATTTGCTTATATTCTAGCTAGGAGGAGAGCAGGTGCCCGTTCAATGCCAAACTA
                      ____________________________________________________________
consensus             ACCTGCATTTGCTTATATTCTAGCTAGGAGGAGAGCAGGTGCCCGTTCAATGCCAAACTA
 
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JMSF030E11+           GATAGAATTNTGCGCTCCACCAAGCTTCTTAGCTTCCACTTGTCATTTCCAAAATGTTTC
                      ____________________________________________________________
consensus             GATAGAATTNTGCGCTCCACCAAGCTTCTTAGCTTCCACTTGTCATTTCCAAAATGTTTC