| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS079E09 | Sequence | 617 | 010747 (6) | emb|CDO99835.1| | 5e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFS090C05 | Sequence | 325 | 010747 (6) | ||||||||
| JMFS106B10 | Sequence | 627 | 010747 (6) | ref|XP_009787113.1| | 73.2 | PREDICTED: uncharacterized protein LOC104235131 [Nicotiana sylvestris] | |||||
| JMSF025K21 | Sequence | 681 | 010747 (6) | emb|CDO99835.1| | 1e-15 | unnamed protein product [Coffea canephora] | 768 | 008543 (3) | ref|XP_006345849.1| | 221 | PREDICTED: uncharacterized protein LOC102603487 [Solanum tuberosum] |
| JMSF029B18 | Sequence | 601 | 010747 (6) | 683 | 008543 (3) | ref|XP_006345849.1| | 290 | PREDICTED: uncharacterized protein LOC102603487 [Solanum tuberosum] | |||
| JMSF030G13 | Sequence | 689 | 010747 (6) | emb|CDO99835.1| | 1e-39 | unnamed protein product [Coffea canephora] | 724 | 008543 (3) | ref|XP_006345849.1| | 345 | PREDICTED: uncharacterized protein LOC102603487 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS079E09+ GCC
____________________________________________________________
consensus GCC
. : . : . : . : . : . :
JMFS079E09+ GTGTGATTGGATTCTTCGTTTCAAAGAACACGTAAAGATTGTCTCCCTTAACATAAAGAA
JMSF030G13+ ATAAAGAA
____________________________________________________________
consensus GTGTGATTGGATTCTTCGTTTCAAAGAACACGTAAAGATTGTCTCCCTTAACATAAAGAA
. : . : . : . : . : . :
JMFS079E09+ AGGGGTCAGCTACANAATTACTGGGAATTCCAGCCTGAGAAGCTGAAGCACAAGTTACAA
JMSF030G13+ AGGGNTCAGCTACAAAATTACTGGGNATTCCAGCCTGAGAAGCTGAAGCACAAGTTACAA
____________________________________________________________
consensus AGGGGTCAGCTACAAAATTACTGGGAATTCCAGCCTGAGAAGCTGAAGCACAAGTTACAA
. : . : . : . : . : . :
JMFS079E09+ CTGGATTGGCCACAGGCCATGCTGCACTCTTGTCCCTCTGCAAATTCATGTCGTCGATTG
JMSF030G13+ CTGGATTGGCCACAGGCCATGCTGCACTCTTGTCCCTCTGCAAATTCATGTCGTCGATTG
JMSF025K21+ TTCATGTCGTCGATTG
____________________________________________________________
consensus CTGGATTGGCCACAGGCCATGCTGCACTCTTGTCCCTCTGCAAATTCATGTCGTCGATTG
. : . : . : . : . : . :
JMFS079E09+ GTTTGAGGGAGAAAGGAGAGTCGCCATAGAAAACCCCAATTGCCCAGGAGCCCTCATTGT
JMSF030G13+ GTTTGAGGGAGAAAGGAGAGTCGCCATAGAAAACCCCAATTGCCCAGGAGCCCTCATTGT
JMFS106B10+ AGAAAGGAGAGTCGCCATAGAAAACCCCAATTGCCCAGGAGCCCTCATTGT
JMSF025K21+ GNTTGAGGGAGAAAGGAGAGTCGCCATAGAAAACCCCAATTGCCCAGGAGCCCTCATTGT
JMSF029B18+ T
____________________________________________________________
consensus GTTTGAGGGAGAAAGGAGAGTCGCCATAGAAAACCCCAATTGCCCAGGAGCCCTCATTGT
. : . : . : . : . : . :
JMFS079E09+ CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
JMSF030G13+ CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
JMFS106B10+ CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
JMSF025K21+ CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
JMSF029B18+ CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
____________________________________________________________
consensus CTTCGCGACACCCCAAGGTGGGCAGGCCGGCATGGACATTAGGCGTGAGCATGAGGCGAG
. : . : . : . : . : . :
JMFS079E09+ CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
JMSF030G13+ CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
JMFS106B10+ CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
JMSF025K21+ CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
JMSF029B18+ CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
____________________________________________________________
consensus CATAGAGGGCCGCTACAGAGCCCAACAACAGAAATGAGACGAGGAAGAAAGTGAAAGCCG
. : . : . : . : . : . :
JMFS079E09+ ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
JMSF030G13+ ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
JMFS090C05+ CCGTTCCCGGAACTATTTCTCC
JMFS106B10+ ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
JMSF025K21+ ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
JMSF029B18+ ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
____________________________________________________________
consensus ACGAGACAACACAGAGATCGCCACCGTTGCTCTTCCCGCCGTTCCCGGAACTATTTCTCC
. : . : . : . : . : . :
JMFS079E09+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
JMSF030G13+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
JMFS090C05+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
JMFS106B10+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
JMSF025K21+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
JMSF029B18+ GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
____________________________________________________________
consensus GGCACCACCACCCGCCGGCGCCGGAAGAGGCGGAGATCGCAACTGGGTTTGAACCCATCG
. : . : . : . : . : . :
JMFS079E09+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
JMSF030G13+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
JMFS090C05+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
JMFS106B10+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
JMSF025K21+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
JMSF029B18+ GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
____________________________________________________________
consensus GTAAAGAAAGATGCGGAGGGTGTCGCCTTAGAGAGATCTGTCGCGGCGGCGCAGCGGTGG
. : . : . : . : . : . :
JMFS079E09+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
JMSF030G13+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
JMFS090C05+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
JMFS106B10+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
JMSF025K21+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
JMSF029B18+ GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
____________________________________________________________
consensus GGTTGCGGTTCCAGAAACGCCGATTAAAGCCGGCATTATATTGTTAAATGCGTGTTAATC
. : . : . : . : . : . :
JMFS079E09+ TATCTATGATCTGG
JMSF030G13+ TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
JMFS090C05+ TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
JMFS106B10+ TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
JMSF025K21+ TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
JMSF029B18+ TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
____________________________________________________________
consensus TATCTATGATCTGGGTAGTTCTCTTTAATGTGAAATTGTGCTTAGGAATTGAGAATAGTG
. : . : . : . : . : . :
JMSF030G13+ GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
JMFS090C05+ GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
JMFS106B10+ GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
JMSF025K21+ GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
JMSF029B18+ GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
____________________________________________________________
consensus GGAAAGAAAAAGAGGAGAGAGTGGAAGAACAGGAATCCGGCGGTGGGGTTTGGGAATTGG
. : . : . : . : . : . :
JMSF030G13+ GGAGGCGGATTGCGTCGGAC
JMFS090C05+ GGA
JMFS106B10+ GGAGGCGGATTGCGTCGGACATATAACAATGGTTTTGCCGTTTGTTGTTTAATGATTTCG
JMSF025K21+ GGAGGCGGATTGCGTCGGACATATAACAATGGTTTTGCCGTTTGTTGTTTAATGATTTCG
JMSF029B18+ GGAGGCGGATTGCGTCGGACATATAACAATGGTTTTGCCGTTTGTTGTTTAATGATTTCG
____________________________________________________________
consensus GGAGGCGGATTGCGTCGGACATATAACAATGGTTTTGCCGTTTGTTGTTTAATGATTTCG
. : . : . : . : . : . :
JMFS106B10+ GAAAAGCACTCTCAGAGACAACAACGTTGAATTGTA
JMSF025K21+ GAAAAGCACTCTCAGAGACAACAACGTTGAATTGTACAGCCTGTTACGCAACT
JMSF029B18+ GAAAAGCACTCTCAGAGACAACAACGTTGAATTGTACAGCCTGTTACGCAACTGACGCTC
____________________________________________________________
consensus GAAAAGCACTCTCAGAGACAACAACGTTGAATTGTACAGCCTGTTACGCAACTGACGCTC