Contig 010746:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017C19Sequence472010746 (3)ref|XP_011086518.1|90.1PREDICTED: uncharacterized protein LOC105168224 [Sesamum indicum]781004239 (3)ref|XP_006438456.1|3e-31hypothetical protein CICLE_v10032202mg [Citrus clementina] gb|ESR51696.1| hypoth
JMSF017C21Sequence257010746 (3)760004239 (3)ref|XP_006438456.1|3e-22hypothetical protein CICLE_v10032202mg [Citrus clementina] gb|ESR51696.1| hypoth
JMSF028N12Sequence670010746 (3)ref|XP_004238694.1|179PREDICTED: uncharacterized protein LOC101259841 [Solanum lycopersicum]762004239 (3)ref|XP_006438457.1|4e-23hypothetical protein CICLE_v10032202mg [Citrus clementina] ref|XP_006438458.1| h

Alignment

This contig is upended


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JMSF028N12+                                                             AGCAGTAGGT
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consensus                                                               AGCAGTAGGT
 
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JMSF028N12+           GTGTGAGGACTATCATTAGCACCCCTTCTGTCAAAACACACCTCCACAGTCCCAGCCAGC
                      ____________________________________________________________
consensus             GTGTGAGGACTATCATTAGCACCCCTTCTGTCAAAACACACCTCCACAGTCCCAGCCAGC
 
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JMSF028N12+           ATCAACTCTCCCTCCCCATCCCCATTTTCTCTGTAGAATCCAACAAGTGTTGCTGTGTGA
                      ____________________________________________________________
consensus             ATCAACTCTCCCTCCCCATCCCCATTTTCTCTGTAGAATCCAACAAGTGTTGCTGTGTGA
 
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JMSF028N12+           GGCATCAAGCTTCTCCTCTCAATCAAATACTGCTTCACAAAAAACTCCAAGAGCTTCAAA
                      ____________________________________________________________
consensus             GGCATCAAGCTTCTCCTCTCAATCAAATACTGCTTCACAAAAAACTCCAAGAGCTTCAAA
 
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JMSF017C19+                     ATATCATCATGGACTCCGCAAACGACTCTGCCAACAACCTCACTGTCATG
JMSF028N12+           TACCCCAAGGATATCATCATGGACTCCGCAAACGACTCTGCCAACAACCTCACTGTCATG
                      ____________________________________________________________
consensus             TACCCCAAGGATATCATCATGGACTCCGCAAACGACTCTGCCAACAACCTCACTGTCATG
 
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JMSF017C19+           TCCATCTCCTCTTGCCTCATCACGCTCACCCAGAGCGACCCAGACTCCAATTCTTGAGAA
JMSF028N12+           TCCATCTCCTCTTGCCTCATCACGCTCACCCAGAGCGACCCAGACTCCAATTCTTGAGAA
                      ____________________________________________________________
consensus             TCCATCTCCTCTTGCCTCATCACGCTCACCCAGAGCGACCCAGACTCCAATTCTTGAGAA
 
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JMSF017C19+           TACGAGTAGTTGTCGAGGAACTGGAGCTTCTCGAGGTCTTCATTGGCGAGAAACCGGGCT
JMSF028N12+           TACGAGTAGTTGTCGAGGAACTGGAGCTTCTCGAGGTCTTCATTGGCGAGAAACCGGGCT
                      ____________________________________________________________
consensus             TACGAGTAGTTGTCGAGGAACTGGAGCTTCTCGAGGTCTTCATTGGCGAGAAACCGGGCT
 
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JMSF017C19+           GTTGGGAGAGGGTTTTGAAGGGATAGCGGCGGTGTGGTTGAGGAAGAGGAAGAGGAAGAG
JMSF017C21+                                                      AAGAGGAAGAGGAAGAG
JMSF028N12+           GTTGGGAGAGGGTTTTGAAGGGATAGCGGCGGTGTGGTTGAGGAAGAGGAAGAGGAAGAG
                      ____________________________________________________________
consensus             GTTGGGAGAGGGTTTTGAAGGGATAGCGGCGGTGTGGTTGAGGAAGAGGAAGAGGAAGAG
 
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JMSF017C19+           GAAGAGTTGGAGGTTGAGAGTAGAGGTGAGATGAGATTGGGAGAGCTGAAATTGGAGGAG
JMSF017C21+           GAAGAGTTGGAGGTTGAGAGTAGAGGTGAGATGAGATTGGGAGAGCTGAAATTGGAGGAG
JMSF028N12+           GAAGAGTTGGAGGTTGAGAGTAGAGGTGAGATGAGATTGGGAGAGCTGAAATTGGAGGAG
                      ____________________________________________________________
consensus             GAAGAGTTGGAGGTTGAGAGTAGAGGTGAGATGAGATTGGGAGAGCTGAAATTGGAGGAG
 
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JMSF017C19+           ATGGCAAAAGGGCGAGTGGGTTTTGGGGTAAAGGTTGAATCTTGAGGGTAGTTGAAGTAG
JMSF017C21+           ATGGCAAAAGGGCGAGTGGGTTTTGGGGTAAAGGTTGAATCTTGAGGGTAGTTGAAGTAG
JMSF028N12+           ATGGCAAAAGGGCGAGTGGGTTTTGGGGTAAAGGTTGAATCTTGAGGGTAGTTGAAGTAG
                      ____________________________________________________________
consensus             ATGGCAAAAGGGCGAGTGGGTTTTGGGGTAAAGGTTGAATCTTGAGGGTAGTTGAAGTAG
 
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JMSF017C19+           GGAATATGGTGAAAAGAGTGGTGGCGGTGATGGTGAGTTCGGGGATCGAAGAAGAGGGAG
JMSF017C21+           GGAATATGGTGAAAAGAGTGGTGGCGGTGATGGTGAGTTCGGGGATCGAAGAAGAGGGAG
JMSF028N12+           GGAATATGGTGAAAAGAGTGGTGGCGGTGATGGTGAGTTCGGGGATCGAAGAAGAGGGAG
                      ____________________________________________________________
consensus             GGAATATGGTGAAAAGAGTGGTGGCGGTGATGGTGAGTTCGGGGATCGAAGAAGAGGGAG
 
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JMSF017C19+           CAACAAATACTAGCGGCCATTTCTGATGAGATGAGACAGGAGAACGTGAACGTGT     
JMSF017C21+           CAACAAATACTAGCGGCCATTTCTGATGAGATGAGACAGGAGAACGTGAACGTGT     
JMSF028N12+           CAACAAATACTAGCGGCCATTTCTGATGAGATGAGACAGGAGAACGTGAACGTGTTCCCC
                      ____________________________________________________________
consensus             CAACAAATACTAGCGGCCATTTCTGATGAGATGAGACAGGAGAACGTGAACGTGTTCCCC