Contig 010743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028F07Sequence638010743 (2)ref|XP_010326949.1|190PREDICTED: uncharacterized protein LOC101266869 [Solanum lycopersicum] ref|XP_01755008556 (2)ref|XP_011009263.1|3e-38PREDICTED: ABC transporter B family member 25-like isoform X2 [Populus euphrati
JMSF030A07Sequence628010743 (2)ref|XP_009762061.1|213PREDICTED: uncharacterized protein LOC104214128 [Nicotiana sylvestris]684008556 (2)emb|CDP18058.1|4e-34unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF030A07+                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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JMSF030A07+           TTAAATTCATTGAGCAATGGCTTAAGCCTGTTCTCAATTCCAAATGCTAATACACCTGGG
                      ____________________________________________________________
consensus             TTAAATTCATTGAGCAATGGCTTAAGCCTGTTCTCAATTCCAAATGCTAATACACCTGGG
 
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JMSF030A07+           TATGACCCAAGAACACAATCAACCTCAGTCCTTTCAATGCCAATACCACTCATCAAGAAT
JMSF028F07+                                 CCTCAGTCCTTTCAATGCCAATACCACTCATCAAGAAT
                      ____________________________________________________________
consensus             TATGACCCAAGAACACAATCAACCTCAGTCCTTTCAATGCCAATACCACTCATCAAGAAT
 
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JMSF030A07+           TCAACTTTACCCTGAATTCTATCCGGACTAGTCATTACCACTTCAGGGAATTCTTCTAAA
JMSF028F07+           TCAACTTTACCCTGAATTCTATCCGGACTAGTCATTACCACTTCAGGGAATTCTTCTAAA
                      ____________________________________________________________
consensus             TCAACTTTACCCTGAATTCTATCCGGACTAGTCATTACCACTTCAGGGAATTCTTCTAAA
 
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JMSF030A07+           ACCCTAATCACAGTACCCTCATTAAACCCTAAACCCTGCAAACACTTCAAACACGCCAAA
JMSF028F07+           ACCCTAATCACAGTACCCTCATTAAACCCTAAACCCTGCAAACACTTCAAACACGCCAAA
                      ____________________________________________________________
consensus             ACCCTAATCACAGTACCCTCATTAAACCCTAAACCCTGCAAACACTTCAAACACGCCAAA
 
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JMSF030A07+           GCATCATCTGGGTCTAGCTCAAACTTCAAACAAACTTGCAGAACATTCTTAATAGCCAAT
JMSF028F07+           GCATCATCTGGGTCTAGCTCAAACTTCAAACAAACTTGCAGAACATTCTTAATAGCCAAT
                      ____________________________________________________________
consensus             GCATCATCTGGGTCTAGCTCAAACTTCAAACAAACTTGCAGAACATTCTTAATAGCCAAT
 
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JMSF030A07+           ACAGAAAGATTAAAACCCTGAATTCCAGACATTACCTTTTCCCATTTCTTCATATACTCG
JMSF028F07+           ACAGAAAGATTAAAACCCTGAATTCCAGACATTACCTTTTCCCATTTCTTCATATACTCG
                      ____________________________________________________________
consensus             ACAGAAAGATTAAAACCCTGAATTCCAGACATTACCTTTTCCCATTTCTTCATATACTCG
 
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JMSF030A07+           TAGTCTAACACCCTAGGGCAACTAGCAACCAGAGAAGTAAGAAATTGTTGAGAGCGGCCC
JMSF028F07+           TAGTCTAACACCCTAGGGCAACTAGCAACCAGAGAAGTAAGAAATTGTTGAGAGCGGCCC
                      ____________________________________________________________
consensus             TAGTCTAACACCCTAGGGCAACTAGCAACCAGAGAAGTAAGAAATTGTTGAGAGCGGCCC
 
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JMSF030A07+           AGAGAAAACAGAATTTGAAGGGATTTTCCAACTTTAGAGGGGTCAGAATTCAGCAAAGAT
JMSF028F07+           AGAGAAAACAGAATTTGAAGGGATTTTCCAACTTTAGAGGGGTCAGAATTCAGCAAAGAT
                      ____________________________________________________________
consensus             AGAGAAAACAGAATTTGAAGGGATTTTCCAACTTTAGAGGGGTCAGAATTCAGCAAAGAT
 
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JMSF030A07+           GGATTCTTGGCAAGGAAATGATGGAGTTCAGATAGTGGAAACCCATACCTCTTGAGAAGA
JMSF028F07+           GGATTCTTGGCAAGGAAATGATGGAGTTCAGATAGTGGAAACCCATACCTCTTGAGAAGA
                      ____________________________________________________________
consensus             GGATTCTTGGCAAGGAAATGATGGAGTTCAGATAGTGGAAACCCATACCTCTTGAGAAGA
 
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JMSF030A07+           CTATAAATGGGTATAAGATTTCTTTGGGGGGATTTTTGATTGTAGTCGAGAGGAAATTGA
JMSF028F07+           CTATAAATGGGTATAAGATTTCTTTGGGGGGATTTTTGATTGTAGTCGAGAGGAAATTGA
                      ____________________________________________________________
consensus             CTATAAATGGGTATAAGATTTCTTTGGGGGGATTTTTGATTGTAGTCGAGAGGAAATTGA
 
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JMSF030A07+           ATTTGGGAATTCAGTTTTGCGGCTCT                                  
JMSF028F07+           ATTTGGGAATTCAGTTTTGCGGCTCTGGGTTTTGCTGAGAAGTGTCGAAGATGAATAGAG
                      ____________________________________________________________
consensus             ATTTGGGAATTCAGTTTTGCGGCTCTGGGTTTTGCTGAGAAGTGTCGAAGATGAATAGAG
 
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JMSF028F07+           TTAGAGAATTTGGATGTTGGAGCTAAAAGAGATCTAAGAGTCCCAACTGCCATGCGAATC
                      ____________________________________________________________
consensus             TTAGAGAATTTGGATGTTGGAGCTAAAAGAGATCTAAGAGTCCCAACTGCCATGCGAATC