| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF027F23 | Sequence | 647 | 010736 (5) | ref|XP_011074970.1| | 9e-114 | PREDICTED: elongation factor 1-gamma-like [Sesamum indicum] | 735 | 013997 (6) | dbj|BAP19108.1| | 4e-101 | elongation factor 1 gamma-like protein, partial [Ipomoea nil] |
| JMSF028K23 | Sequence | 655 | 010736 (5) | ref|XP_011074970.1| | 3e-117 | PREDICTED: elongation factor 1-gamma-like [Sesamum indicum] | 665 | 013997 (6) | dbj|BAP19108.1| | 7e-101 | elongation factor 1 gamma-like protein, partial [Ipomoea nil] |
| JMSF029A08 | Sequence | 648 | 010736 (5) | ref|XP_011074970.1| | 2e-116 | PREDICTED: elongation factor 1-gamma-like [Sesamum indicum] | 750 | 013997 (6) | dbj|BAP19108.1| | 1e-101 | elongation factor 1 gamma-like protein, partial [Ipomoea nil] |
| JMSF043G11 | Sequence | 771 | 010736 (5) | ref|XP_011074970.1| | 2e-127 | PREDICTED: elongation factor 1-gamma-like [Sesamum indicum] | 826 | 013997 (6) | gb|KDO42760.1| | 2e-103 | hypothetical protein CISIN_1g014592mg [Citrus sinensis] |
| JMSF046O09 | Sequence | 683 | 010736 (5) | ref|XP_011074970.1| | 3e-116 | PREDICTED: elongation factor 1-gamma-like [Sesamum indicum] | 574 | 013997 (6) | dbj|BAP19108.1| | 5e-94 | elongation factor 1 gamma-like protein, partial [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMSF043G11+ TNTGGGGTGTTGCAGGTTCTTTTGGCTGT
____________________________________________________________
consensus TNTGGGGTGTTGCAGGTTCTTTTGGCTGT
. : . : . : . : . : . :
JMSF043G11+ GCTGGCTTCTTGGATGTAGGAGCTGGAACTGATTCTGCCTGTTTAATTTCTCCCAATATC
____________________________________________________________
consensus GCTGGCTTCTTGGATGTAGGAGCTGGAACTGATTCTGCCTGTTTAATTTCTCCCAATATC
. : . : . : . : . : . :
JMSF046O09+ TGAAATTTGGCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
JMSF043G11+ TTGCTGAAATTTGGCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
JMSF029A08+ TGAAATTTGGCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
JMSF028K23+ TGAAATTNGGCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
JMSF027F23+ GCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
____________________________________________________________
consensus TTGCTGAAATTTGGCTGATTAACCATAGTCCAGAAATATCTCTCCACATGAGGGAATTCC
. : . : . : . : . : . :
JMSF046O09+ TTAGTAAAGCTNTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
JMSF043G11+ TTAGTAAAGCTNTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
JMSF029A08+ TTAGTAAAGCTCTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
JMSF028K23+ TTAGTAAAGCTCTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
JMSF027F23+ TTAGTAAAGCTCTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
____________________________________________________________
consensus TTAGTAAAGCTCTTAGTCAAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATA
. : . : . : . : . : . :
JMSF046O09+ ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
JMSF043G11+ ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
JMSF029A08+ ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
JMSF028K23+ ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
JMSF027F23+ ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
____________________________________________________________
consensus ATGTCAGCCAGTGTGATGGAGTGTCCAACCAAGAAGGTGTTAGAGGCAAGGTGCAGGTTC
. : . : . : . : . : . :
JMSF046O09+ AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
JMSF043G11+ AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
JMSF029A08+ AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
JMSF028K23+ AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
JMSF027F23+ AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
____________________________________________________________
consensus AAGGCATCCAATGCTCTCTTAAGTGTGGCGATTGCAACTTCTTCAGCCGGAGGCAAATAT
. : . : . : . : . : . :
JMSF046O09+ ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
JMSF043G11+ ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
JMSF029A08+ ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
JMSF028K23+ ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
JMSF027F23+ ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
____________________________________________________________
consensus ACACCGTAGCCAAATCGAGGATACAACCACCTGCCAATATTACCATCAACCTCCGTAGCC
. : . : . : . : . : . :
JMSF046O09+ GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
JMSF043G11+ GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
JMSF029A08+ GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
JMSF028K23+ GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
JMSF027F23+ GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
____________________________________________________________
consensus GAGAAATCATTCCATTGTTCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGA
. : . : . : . : . : . :
JMSF046O09+ CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
JMSF043G11+ CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
JMSF029A08+ CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
JMSF028K23+ CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
JMSF027F23+ CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
____________________________________________________________
consensus CTGTCAGGCTTCACTTTAGCAACATATCGTGCAATTGCATTGCTCTCAAACACAGACCCA
. : . : . : . : . : . :
JMSF046O09+ TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
JMSF043G11+ TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
JMSF029A08+ TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
JMSF028K23+ TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
JMSF027F23+ TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
____________________________________________________________
consensus TCAGGTGTTTCAAGCACAGGAACCTTTCCAAATGGACTAATCTTAAGAAACTCGGGAGTC
. : . : . : . : . : . :
JMSF046O09+ TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
JMSF043G11+ TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
JMSF029A08+ TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
JMSF028K23+ TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
JMSF027F23+ TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
____________________________________________________________
consensus TTGTTTGATACACCCATCTGAAAGTCCTTCACCAGTTCAATCTTTATACCATTGTATTCT
. : . : . : . : . : . :
JMSF046O09+ GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
JMSF043G11+ GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
JMSF029A08+ GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
JMSF028K23+ GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
JMSF027F23+ GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
____________________________________________________________
consensus GCAGCAATGAGAGCCTTGCAAGCGTTTTTGTTCGTACTGGAGGAATGAAGAATCAGAGCC
. : . : . : . : . : . :
JMSF046O09+ ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTG
JMSF043G11+ ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTG
JMSF029A08+ ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTGACCC
JMSF028K23+ ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTGACCC
JMSF027F23+ ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTGACCCAAGAAAACC
____________________________________________________________
consensus ATGGCTTCGGTGTAGACACTTCAATGAATAATCACCGCAGAAACCTGACCCAAGAAAACC