Contig 010734:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015G09Sequence605010734 (3)ref|XP_011102115.1|1e-72PREDICTED: tetratricopeptide repeat protein 33 [Sesamum indicum]704010734 (3)ref|XP_007019248.1|1e-69Tetratricopeptide repeat-like superfamily protein [Theobroma cacao] gb|EOY16473
JMSF026I17Sequence638010734 (3)ref|XP_004237352.1|2e-39PREDICTED: tetratricopeptide repeat protein 33 isoform X1 [Solanum lycopersicum

Alignment

This contig is upended


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rJMFF015G09-                                    TTCTATAGCATAATCTCGGATAACATACAACACA
                      ____________________________________________________________
consensus                                       TTCTATAGCATAATCTCGGATAACATACAACACA
 
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rJMFF015G09-          AATGCTTGATAACTGATACGTTCACCTAAGATTACAGGTATACTCTTTGTGATTGCCGGC
                      ____________________________________________________________
consensus             AATGCTTGATAACTGATACGTTCACCTAAGATTACAGGTATACTCTTTGTGATTGCCGGC
 
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rJMFF015G09-          CAGCTACTACATCTCATATCAAACTCGCCGGAGTTCCGGCCAAACCACAGAACAGATTGC
                      ____________________________________________________________
consensus             CAGCTACTACATCTCATATCAAACTCGCCGGAGTTCCGGCCAAACCACAGAACAGATTGC
 
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rJMFF015G09-          CTTAATTCCTTCAGGTCTGACACTAGTAGTTTACACAGATCTTTGAAGCGAAATGACGAC
                      ____________________________________________________________
consensus             CTTAATTCCTTCAGGTCTGACACTAGTAGTTTACACAGATCTTTGAAGCGAAATGACGAC
 
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rJMFF015G09-          TCCATAAGAACTTCACACTAGTTGTTGACTGGAACAAAGCATGCATATATACACAAATTC
                      ____________________________________________________________
consensus             TCCATAAGAACTTCACACTAGTTGTTGACTGGAACAAAGCATGCATATATACACAAATTC
 
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rJMFF015G09-          CCGACTCCTCAGGAGCTTTCAGTCTTATCACCAACTGCAAAGCGGTGCTGGTCCATGCTG
                      ____________________________________________________________
consensus             CCGACTCCTCAGGAGCTTTCAGTCTTATCACCAACTGCAAAGCGGTGCTGGTCCATGCTG
 
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rJMFF015G09-          CGGCCTGATGAATGAACAAGTTTTCGCCTCTTCACAAGAGCTAATGCAGTCTTGCGATCA
JMFF015G09+                                                   CTAATGCAGTCTTGCGATCA
                      ____________________________________________________________
consensus             CGGCCTGATGAATGAACAAGTTTTCGCCTCTTCACAAGAGCTAATGCAGTCTTGCGATCA
 
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rJMFF015G09-          CTGTGTGCCTCAACTGAATCTGGCTGAATAGCAAGCGCTTTATCAAAGCTTTCAATTGCA
JMFF015G09+           CTGTGTGCCTCAACTGAATCTGGCTGAATAGCAAGCGCTTTATCAAAGCTTTCAATTGCA
                      ____________________________________________________________
consensus             CTGTGTGCCTCAACTGAATCTGGCTGAATAGCAAGCGCTTTATCAAAGCTTTCAATTGCA
 
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rJMFF015G09-          TTATCAGGCTCTCCGAAATTTAGTTGTGATCTAGCAAGTGTGATCCATGCCTCAGCCCAT
JMFF015G09+           TTATCAGGCTCTCCGAAATTTAGTTGTGATCTAGCAAGTGTGATCCATGCCTCAGCCCAT
                      ____________________________________________________________
consensus             TTATCAGGCTCTCCGAAATTTAGTTGTGATCTAGCAAGTGTGATCCATGCCTCAGCCCAT
 
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rJMFF015G09-          TTTGGTTCCAGTTCAGTAGCTCGTGTTGCGGCTTTCAAAGCATTCCATGCATCTCCAAGT
JMFF015G09+           TTTGGTTCCAGTTCAGTAGCTCGTGTTGCGGCTTTCAAAGCATTCCATGCATCTCCAAGT
JMSF026I17+                                CGTGTTGCGGCTTTCAAAGCATTCCATGCATCTCCAAGT
                      ____________________________________________________________
consensus             TTTGGTTCCAGTTCAGTAGCTCGTGTTGCGGCTTTCAAAGCATTCCATGCATCTCCAAGT
 
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rJMFF015G09-          TCAAGCAAAATCTGAGCCTTTTGTTCATGTATAACAGCTCGTTCTGGCATCAATACAAGA
JMFF015G09+           TCAAGCAAAATCTGAGCCTTTTGTTCATGTATAACAGCTCGTTCTGGCATCAATACAAGA
JMSF026I17+           TCAAGCAAAATCTGAGCCTTTTGTTCATGTATAACAGCTCGTTCTGGCATCAATACAAGA
                      ____________________________________________________________
consensus             TCAAGCAAAATCTGAGCCTTTTGTTCATGTATAACAGCTCGTTCTGGCATCAATACAAGA
 
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rJMFF015G09-          GCAGATTCCCACTTCCCTAGTGCCTCACGATATTTCCCATCCTTAGCGAGTTTATTTCCT
JMFF015G09+           GCAGATTCCCACTTCCCTAGTGCCTCACGATATTTCCCATCCTTAGCGAGTTTATTTCCT
JMSF026I17+           GCAGATTCCCACTTCCCTAGTGCCTCACGATATTTCCCATCCTCAGCGAGTTTATTTCCT
                      ____________________________________________________________
consensus             GCAGATTCCCACTTCCCTAGTGCCTCACGATATTTCCCATCCTTAGCGAGTTTATTTCCT
 
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rJMFF015G09-          TGTTGTTGAA                                                  
JMFF015G09+           TGTTGTTGAAAGGAGTCGGCGAGTCTGAGGGTTTCCCCATCACCGTTGAGAATTGGGGCG
JMSF026I17+           TGTTGTTGAAAGGAGTCGGCGAGTCTGAGGGTTTCCCCATCACCGTTGAGAATTGGGGCG
                      ____________________________________________________________
consensus             TGTTGTTGAAAGGAGTCGGCGAGTCTGAGGGTTTCCCCATCACCGTTGAGAATTGGGGCG
 
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JMFF015G09+           GTCGTCTTCTCCTGAACGTCGTCGTTAGGAGGCGATTCCTCCTTCGGAAACGAAGAAACT
JMSF026I17+           GGCGTCTTCTCCTGAACGTCGTCGTTAGGAGGCGATTCCTCCTTCGGAAACGAAGAAACT
                      ____________________________________________________________
consensus             GTCGTCTTCTCCTGAACGTCGTCGTTAGGAGGCGATTCCTCCTTCGGAAACGAAGAAACT
 
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JMFF015G09+           TCGACGCTGAGATTTTCCGAGGCGTCGTCGCTGAAAGGGAGATTGGGGAAGTGAGATATG
JMSF026I17+           TCGACGCTGAGATTTTCCGAGGCGTCGTCGCTGAAAGGGAGATTGGGGAAGTGAGATATG
                      ____________________________________________________________
consensus             TCGACGCTGAGATTTTCCGAGGCGTCGTCGCTGAAAGGGAGATTGGGGAAGTGAGATATG
 
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JMFF015G09+           GGGCGCTTCTTGCTGCTTTCGCTCCTTTTCCATGTCAACTTCATATTTGGTGTCTGATTA
JMSF026I17+           GGGCGCTTCTTGCTGCTTTCGCTCCTTTTCCATGTCAACTTCATATTTGGTGTCTGATTA
                      ____________________________________________________________
consensus             GGGCGCTTCTTGCTGCTTTCGCTCCTTTTCCATGTCAACTTCATATTTGGTGTCTGATTA
 
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JMFF015G09+           GTATAGTGTTTAGTATGTAGTCTGTAGCAGTATTCTGAAGAACAG               
JMSF026I17+           GTATAGTGTTTAGTATGTAGTCTGTAGCAGTATTCTGAAGAACAGGGAAGAATAAAAGTG
                      ____________________________________________________________
consensus             GTATAGTGTTTAGTATGTAGTCTGTAGCAGTATTCTGAAGAACAGGGAAGAATAAAAGTG
 
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JMSF026I17+           AAGGAGAGATCTCTTATACTCAGCCGCCTACCGACGTAACTGGAAAACTTCTTATCATCC
                      ____________________________________________________________
consensus             AAGGAGAGATCTCTTATACTCAGCCGCCTACCGACGTAACTGGAAAACTTCTTATCATCC