Contig 010724:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019M11Sequence485010724 (4)ref|XP_009803442.1|9e-39PREDICTED: UPF0202 protein At1g10490-like [Nicotiana sylvestris]742009820 (9)emb|CDP12880.1|3e-51unnamed protein product [Coffea canephora]
JMSF025J20Sequence139010724 (4)783009820 (9)ref|XP_002279361.1|7e-96PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera] emb|CBI21526.3| unnamed pr
JMSF039J09Sequence671010724 (4)gb|KDO50463.1|3e-74hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1|870009820 (9)emb|CDP12880.1|9e-67unnamed protein product [Coffea canephora]
JMSF047H05Sequence706010724 (4)gb|KDO50463.1|9e-75hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1|774009820 (9)emb|CDP12880.1|2e-44unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF039J09+                TTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
JMSF047H05+             TCTTTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
                      ____________________________________________________________
consensus               TCTTTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
 
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JMSF039J09+           AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
JMSF047H05+           AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
                      ____________________________________________________________
consensus             AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
 
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JMSF039J09+           GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
JMSF047H05+           GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
                      ____________________________________________________________
consensus             GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
 
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JMSF039J09+           TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
JMSF019M11+                        ACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
JMSF047H05+           TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
                      ____________________________________________________________
consensus             TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
 
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JMSF039J09+           TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
JMSF019M11+           TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTNTTAGTTGCTTCTTCCTT
JMSF047H05+           TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
                      ____________________________________________________________
consensus             TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
 
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JMSF039J09+           TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
JMSF019M11+           TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTNGTAGCACCAAAGGACAGTGGGGCGC
JMSF047H05+           TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
                      ____________________________________________________________
consensus             TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
 
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JMSF039J09+           GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
JMSF019M11+           GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
JMSF047H05+           GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
                      ____________________________________________________________
consensus             GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
 
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JMSF039J09+           TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
JMSF019M11+           TCACCGATGATGACGAACATGGATCGATGACGGTTTTNGACGCCATTCTCGATGAGGGTT
JMSF047H05+           TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
                      ____________________________________________________________
consensus             TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
 
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JMSF039J09+           CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTG 
JMSF019M11+           NTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTNGTCTGGGGACTG 
JMSF047H05+           CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTGG
                      ____________________________________________________________
consensus             CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTGG
 
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JMSF047H05+           GATATATTAAGTGGTGATCAAACAGTAAACCGAAAAACCTGTCGTGGGAAGAGAGACAGG
JMSF025J20+                                                    TCGTGGGAAGAGAGACAGG
                      ____________________________________________________________
consensus             GATATATTAAGTGGTGATCAAACAGTAAACCGAAAAACCTGTCGTGGGAAGAGAGACAGG
 
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JMSF047H05+           AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAC
JMSF025J20+           AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAA
                      ____________________________________________________________
consensus             AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAC
 
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JMSF047H05+           TGCGCCGTCTGTGGGTTGTGGCTGTGGAATGTTCGAATGCAGAA                
JMSF025J20+           TGCNCCGTCTGTGGGTTGTGNCTGTGGAATGTTCGAATGCAGAANCCGAGGGAAATTTCC
                      ____________________________________________________________
consensus             TGCGCCGTCTGTGGGTTGTGGCTGTGGAATGTTCGAATGCAGAANCCGAGGGAAATTTCC