Contig 010721:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS110G05+                     AGTGGGCACANAACCACTGTTAGTTACATCATGGCTATGGTGAATCATCC
JMFS167F06+                                      TGTTAGTTACATCATGGCTATGGTGAATCATCC
                      ____________________________________________________________
consensus                       AGTGGGCACANAACCACTGTTAGTTACATCATGGCTATGGTGAATCATCC
 
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JMFS110G05+           CATTACGTGGAGTTGTTACACCTTGTGAAGCATTACTGCCACCAGGAAATGATCCATCAG
JMFS167F06+           CATTACGTGGAGTTGTTACACCTTGTGAAGCATTACTGCCACCAGGAAATGATCCATCAG
                      ____________________________________________________________
consensus             CATTACGTGGAGTTGTTACACCTTGTGAAGCATTACTGCCACCAGGAAATGATCCATCAG
 
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JMFS110G05+           CACAGATTATCAACAATGGTCGACTGTTGGCAAATTTGTCCCCATGTTGCTTTAATGAAA
JMFS167F06+           CACAGATTATCAACAATGGTCGACTGTTGGCAAATTTGTCCCCATGTTGCTTTAATGAAA
                      ____________________________________________________________
consensus             CACAGATTATCAACAATGGTCGACTGTTGGCAAATTTGTCCCCATGTTGCTTTAATGAAA
 
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JMFS110G05+           TTGGTTTTGGTAATATTTGCATAAATGAAACAGGACCATCATGCTTGGAAATCAAGTTGT
JMFS167F06+           TTGGTTTTGGTAATATTTGCATAAATGAAACAGGACCATCATGCTTGGAAATCAAGTTGT
                      ____________________________________________________________
consensus             TTGGTTTTGGTAATATTTGCATAAATGAAACAGGACCATCATGCTTGGAAATCAAGTTGT
 
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JMFS110G05+           GAACATTATCAGGTTCTTCAACATCCCAAACCTGGAAGCCATACCAACAGCCTAAGAGCA
JMFS167F06+           GAACATTATCAGGTTCTTCAACATCCCAAACCTGGAAGCCATACCAACAGCCTAAGAGCA
                      ____________________________________________________________
consensus             GAACATTATCAGGTTCTTCAACATCCCAAACCTGGAAGCCATACCAACAGCCTAAGAGCA
 
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JMFS110G05+           AAACTTGGCGGGTTATGCGTCCCTCACATTCTATCTTGTCAAAACCAGCCCAAAGAACCT
JMFS167F06+           AAACTTGGCGGGTTATGCGTCCCTCACATTCTATCTTGTCAAAACCAGCCCAAAGAACCT
                      ____________________________________________________________
consensus             AAACTTGGCGGGTTATGCGTCCCTCACATTCTATCTTGTCAAAACCAGCCCAAAGAACCT
 
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JMFS110G05+           GATAATGGGTAGATTCATTATCCCTATCCACAATAGCTGAGGCAGCAGAAGCTGCTGACT
JMFS167F06+           GATAATGGGTAGATTCATTATCCCTATCCACAATAGCTGAGGCAGCAGAAGCTGCTGACT
                      ____________________________________________________________
consensus             GATAATGGGTAGATTCATTATCCCTATCCACAATAGCTGAGGCAGCAGAAGCTGCTGACT
 
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JMFS110G05+           TCACAGTTGAAGCAACAGTTGAGGCACCGGAAGACATAATCCTTGAGAGAGCACGGAATG
JMFS167F06+           TCACAGTTGAAGCAACAGTTGAGGCACCGGAAGACATAATCCTTGAGAGAGCACGGAATG
                      ____________________________________________________________
consensus             TCACAGTTGAAGCAACAGTTGAGGCACCGGAAGACATAATCCTTGAGAGAGCACGGAATG
 
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JMFS110G05+           ATGTCGGAATGAAGCCATTTTTGCTGCTCCGGCATGACCTAAGCCCTCCTCCTTTTCCAC
JMFS167F06+           ATGTCGGAATGAAGCCATTTTTGCTGCTCCGGCATGACCTAAGCCCTCCTCCTTTTCCAC
                      ____________________________________________________________
consensus             ATGTCGGAATGAAGCCATTTTTGCTGCTCCGGCATGACCTAAGCCCTCCTCCTTTTCCAC
 
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JMFS110G05+           CCTCCTGCGGCAGTTTCTGGCAATCATTCTTCATCCCAGAACACAATAACAAGCAAACAC
JMFS167F06+           CCTCCTGCGGCAGTTTCTGGCAATCATTCTTCATCCCAGAACACAATAACAAGCAAACAC
JMSF051N12+                TGCGGCAGTTTCTGGCANTCATTCTTCATCCCAGAACNCAATAACAAGCAAACAC
                      ____________________________________________________________
consensus             CCTCCTGCGGCAGTTTCTGGCAATCATTCTTCATCCCAGAACACAATAACAAGCAAACAC
 
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JMFS110G05+           GACACAGCAATCCAGAACAACTCT                                    
JMFS167F06+           GACACAGCAATCCAGAACAACTCTGAGATTCTCAAAACC                     
JMSF051N12+           GACACAGCAATCCAGAACAACTCTGAGATTCTCAAAACCTCTCTTTTCCCCTCTTATCAT
JMFS166D12+                AGCAATCCAGAACAACTCTGAGATTCTCAAAACCTCTCTTTTCCCCTCTTATCAT
JMSF025F04+                                                               CTTATCAT
                      ____________________________________________________________
consensus             GACACAGCAATCCAGAACAACTCTGAGATTCTCAAAACCTCTCTTTTCCCCTCTTATCAT
 
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JMSF051N12+           AACCCCAAACCCTTCCCCACATACCCACTGGTGTCATCAGCTCTAGGAACAAAATTCCCA
JMFS166D12+           AACCCCAAACCCTTCCCCACATACCCACTGGTGTCATCAGCTCTAGGAACAAAATTCCCA
JMSF025F04+           ANCCCCANACCCTTCCCCACATACCCACTGGTGTCATCAGCTCTAGGAACAAAATTCCCA
                      ____________________________________________________________
consensus             AACCCCAAACCCTTCCCCACATACCCACTGGTGTCATCAGCTCTAGGAACAAAATTCCCA
 
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JMSF051N12+           AAAAAGCGTCAGCTTTTCGTCCCAGTGAGTCTCCACCATCTACTCCCAGCCGCGAAAACT
JMFS166D12+           AAAAAGCGTCAGCTTTTCGTCCCAGTGAGTCTCCACCATCTACTCCCAGCCGCGAAAACT
JMSF025F04+           AAAAAGCGTCAGCTTTTCGTCCCAGTGAGTCTCCACCATCTACTCCCAGCCGCGAAAACT
                      ____________________________________________________________
consensus             AAAAAGCGTCAGCTTTTCGTCCCAGTGAGTCTCCACCATCTACTCCCAGCCGCGAAAACT
 
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JMSF051N12+           CCAAAAATAGCAAAGCAGACTCACCGCTCCAATTCTCTCGAATCACAACAAAACAAAACG
JMFS166D12+           CCAAAAATAGCAAAGCAGACTCACCGCTCCAATTCTCTCGAATCACAACAAAACAAAACG
JMSF025F04+           CCAAAAATAGCAAAGCAGACTCACCGCTCCAATTCTCTNGAATCACANCAAAACANAACG
                      ____________________________________________________________
consensus             CCAAAAATAGCAAAGCAGACTCACCGCTCCAATTCTCTCGAATCACAACAAAACAAAACG
 
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JMSF051N12+           AGAGTGCGAAAAGGGAAATATTGATAACACTCCAAACCAGCACAACAAATTCTTCAAAAG
JMFS166D12+           AGAGTGCGAAAAGGGAAATATTGATAACACTCCAAACCAGCACAACAAATTCTTCAAAAG
JMSF025F04+           AGAGTGCGAAAAGGGAAATATTGATAACACTCCNAACCAGCACAACAAATTCTTCAAAAG
                      ____________________________________________________________
consensus             AGAGTGCGAAAAGGGAAATATTGATAACACTCCAAACCAGCACAACAAATTCTTCAAAAG
 
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JMSF051N12+           CTCGTGTGTCGTACGCACAATCTATCTGATGATCCAATCGGTAACTATAATCTATAGACC
JMFS166D12+           CTCGTGTGTCGTACGCACAATCTATCTGATGATCCAATCGGTAACTATAATCTATAGACC
JMSF025F04+           CTCGTGTGTCGTACGCACAATNTATCTGATGATCCAATCGGTAACTATAATCTATAGACC
                      ____________________________________________________________
consensus             CTCGTGTGTCGTACGCACAATCTATCTGATGATCCAATCGGTAACTATAATCTATAGACC
 
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JMSF051N12+           CAAAAAGTTAAACAACTTTAAACAGCAACAATAAAATAATAAATCAACAAACTATAAACA
JMFS166D12+           CAAAAAGTTAAACAACTTTAAACAGCAACAATAAAATAATAAATCAACAAACTATAAACA
JMSF025F04+           CAAAAAGTTAAACANCTTTAAACAGCAACAATAAAATAATAAATCAACAAACTATAAACA
                      ____________________________________________________________
consensus             CAAAAAGTTAAACAACTTTAAACAGCAACAATAAAATAATAAATCAACAAACTATAAACA
 
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JMSF051N12+           ATTTAGAAAAAAGAATCCGTAGAGCTAAATACACGGATGATTGTTGTTAATCGAATAGAA
JMFS166D12+           ATTTAGAAAAAAGAATCCGTAGAGCTAAATACACGGATGATTGTTGTTAATCGAATAGAA
JMSF025F04+           ATTTAGAAAAAAGAATCCGTAGAGCTAAATACACGGATGATTGTTGTTAATCGAATAGAA
                      ____________________________________________________________
consensus             ATTTAGAAAAAAGAATCCGTAGAGCTAAATACACGGATGATTGTTGTTAATCGAATAGAA
 
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JMSF051N12+           TTGTATAGTTAGGGTTTTTGAAATTGGAGAGAAACACGCATAGAGAGAGAGAGCGAGATT
JMFS166D12+           TTGTATAGTTAGGGTTTTTGAAATTGGAGAGAAACACGCATAGAGAGAGAGAGCGAGATT
JMSF025F04+           TTGTATAGTTAGGGTTTTTGAAATTGGAGAGAAACACGCATAGAGAGAGAGAGCGAGATT
                      ____________________________________________________________
consensus             TTGTATAGTTAGGGTTTTTGAAATTGGAGAGAAACACGCATAGAGAGAGAGAGCGAGATT
 
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JMSF051N12+           TTTTTGTTGATGTAT                                             
JMFS166D12+           TTTTTGTTGATGTATAAGAGTTTGGCGTGTAGAGAGAGAAAGAAGAA             
JMSF025F04+           TTTTTGTTGATGTATAAGAGTTTGGCGTGTAGAGAGAGAAAGAAGAAGGCCAAGCCTGCC
                      ____________________________________________________________
consensus             TTTTTGTTGATGTATAAGAGTTTGGCGTGTAGAGAGAGAAAGAAGAAGGCCAAGCCTGCC