Contig 010711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023O08Sequence694010711 (3)798024571ref|XP_006356833.1|3e-64PREDICTED: transcription factor bHLH74-like isoform X1 [Solanum tuberosum] ref|
JMSF037H02Sequence674010711 (3)783005761 (4)ref|XP_006356833.1|2e-30PREDICTED: transcription factor bHLH74-like isoform X1 [Solanum tuberosum] ref|
JMSF053G23Sequence609010711 (3)860005761 (4)ref|XP_006356833.1|4e-30PREDICTED: transcription factor bHLH74-like isoform X1 [Solanum tuberosum] ref|

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037H02+ GAGAAGAAAGTACGAAACTTTCAGGGCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
JMSF023O08+ GCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
                      ____________________________________________________________
consensus GAGAAGAAAGTACGAAACTTTCAGGGCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
 
. : . : . : . : . : . :
JMSF037H02+ GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
JMSF053G23+ CCCTGATGT
JMSF023O08+ GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
                      ____________________________________________________________
consensus GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
 
. : . : . : . : . : . :
JMSF037H02+ TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
JMSF053G23+ TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
JMSF023O08+ TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
                      ____________________________________________________________
consensus TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
 
. : . : . : . : . : . :
JMSF037H02+ TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
JMSF053G23+ TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
JMSF023O08+ TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
                      ____________________________________________________________
consensus TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
 
. : . : . : . : . : . :
JMSF037H02+ AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
JMSF053G23+ AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
JMSF023O08+ AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
                      ____________________________________________________________
consensus AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
 
. : . : . : . : . : . :
JMSF037H02+ TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
JMSF053G23+ TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
JMSF023O08+ TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
                      ____________________________________________________________
consensus TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
 
. : . : . : . : . : . :
JMSF037H02+ CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
JMSF053G23+ CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
JMSF023O08+ CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
                      ____________________________________________________________
consensus CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
 
. : . : . : . : . : . :
JMSF037H02+ AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
JMSF053G23+ AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
JMSF023O08+ AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
                      ____________________________________________________________
consensus AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
 
. : . : . : . : . : . :
JMSF037H02+ CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
JMSF053G23+ CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
JMSF023O08+ CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
                      ____________________________________________________________
consensus CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
 
. : . : . : . : . : . :
JMSF037H02+ CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
JMSF053G23+ CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
JMSF023O08+ CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
                      ____________________________________________________________
consensus CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
 
. : . : . : . : . : . :
JMSF037H02+ TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
JMSF053G23+ TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
JMSF023O08+ TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
                      ____________________________________________________________
consensus TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
 
. : . : . : . : . : . :
JMSF037H02+ GAAGAGAAGTTAAC
JMSF053G23+ GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAG
JMSF023O08+ GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAGTC
                      ____________________________________________________________
consensus GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAGTC