Contig 010711:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037H02+            GAGAAGAAAGTACGAAACTTTCAGGGCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
JMSF023O08+                                     GCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
                      ____________________________________________________________
consensus              GAGAAGAAAGTACGAAACTTTCAGGGCATAAAGTGGACAATGGGAGAGAAATGAAAGGC
 
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JMSF037H02+           GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
JMSF053G23+                                                              CCCTGATGT
JMSF023O08+           GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
                      ____________________________________________________________
consensus             GTAAGTAACAGCTCACCAGAGGAACAAAAAGAAAGCAGATTCCCTTTCTTTCCCTGATGT
 
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JMSF037H02+           TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
JMSF053G23+           TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
JMSF023O08+           TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
                      ____________________________________________________________
consensus             TTATGCAAACCCCATAAGTGTCATATATTTTCACATCCTCTAATTCAACACTAAACTTGA
 
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JMSF037H02+           TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
JMSF053G23+           TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
JMSF023O08+           TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
                      ____________________________________________________________
consensus             TCTTAGCAGGGCTTAAATCTTGTTTTTGAGCTGCACACAATGAGGATCACGCCCTAAACT
 
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JMSF037H02+           AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
JMSF053G23+           AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
JMSF023O08+           AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
                      ____________________________________________________________
consensus             AGGTAAAAGAAGCCCCTTTTGGCAGGGAAGAAAAATATACCAATCCTTGTAAAAGAAGCT
 
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JMSF037H02+           TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
JMSF053G23+           TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
JMSF023O08+           TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
                      ____________________________________________________________
consensus             TAGAATCAAGACTCAACCAAAACCCCCCACAAGGATCAAGAAAAGCAAAGTCCCAAGGAC
 
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JMSF037H02+           CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
JMSF053G23+           CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
JMSF023O08+           CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
                      ____________________________________________________________
consensus             CCTTTTCTAGATATTCTCAATCTGGGTACCCAAAACCATCAAACTACTGGAATTGTGGAG
 
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JMSF037H02+           AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
JMSF053G23+           AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
JMSF023O08+           AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
                      ____________________________________________________________
consensus             AGGAAGAGATAAATGAGCGGGGGACCTCACACCCAGACCCTCAAATGGGTTGTTTGATGG
 
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JMSF037H02+           CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
JMSF053G23+           CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
JMSF023O08+           CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
                      ____________________________________________________________
consensus             CACTCCCCCTTAAGAATCAAATGCTGGTTCAAATTCCACAAAGAAGTAAATCTATCCACC
 
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JMSF037H02+           CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
JMSF053G23+           CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
JMSF023O08+           CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
                      ____________________________________________________________
consensus             CACTGCACTGTGGGCACTTGCAGAAATGGCAAAGAAAGCAAGGATCTTTATAGATCAAAT
 
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JMSF037H02+           TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
JMSF053G23+           TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
JMSF023O08+           TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
                      ____________________________________________________________
consensus             TATCCTAAATTACTCCCTAGGGGATAGGTGTGAGAGCAAAGCATATAAAGAATGATGAGA
 
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JMSF037H02+           GAAGAGAAGTTAAC                                              
JMSF053G23+           GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAG  
JMSF023O08+           GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAGTC
                      ____________________________________________________________
consensus             GAAGAGAAGTTAACAAGGCCGCCGGGTGTTTGGCAATTGGCATCTTTTACCTGCCCAGTC