| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002M06 | Sequence | 590 | 010710 (10) | ref|XP_004232400.1| | 8e-87 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 696 | 011127 (9) | gb|EYU29487.1| | 6e-126 | hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU |
| JMFF009O15 | Sequence | 598 | 010710 (10) | ref|XP_004232400.1| | 5e-83 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 756 | 011127 (9) | gb|EYU29487.1| | 7e-113 | hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU |
| JMFF022H02 | Sequence | 521 | 010710 (10) | ref|XP_009794665.1| | 5e-58 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 450 | 011127 (9) | ref|XP_006573312.1| | 1e-42 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochond |
| JMFF033K14 | Sequence | 462 | 010710 (10) | ref|XP_009794665.1| | 1e-51 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | |||||
| JMFF038I06 | Sequence | 549 | 010710 (10) | ref|XP_009794665.1| | 6e-77 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 781 | 011127 (9) | gb|EYU29487.1| | 5e-116 | hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU |
| JMFF039L11 | Sequence | 586 | 010710 (10) | ref|XP_004232400.1| | 2e-85 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 752 | 011127 (9) | gb|EYU29487.1| | 6e-112 | hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU |
| JMFF049B05 | Sequence | 633 | 010710 (10) | ref|XP_004232400.1| | 5e-96 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 613 | 011127 (9) | gb|EYU29487.1| | 1e-83 | hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU |
| JMFS162C02 | Sequence | 535 | 010710 (10) | ref|XP_009794665.1| | 1e-69 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | |||||
| JMSF023N21 | Sequence | 599 | 010710 (10) | ref|XP_004232400.1| | 4e-78 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 784 | 011127 (9) | ref|XP_011097110.1| | 4e-174 | PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprote |
| JMSF039E23 | Sequence | 711 | 010710 (10) | ref|XP_004232400.1| | 3e-117 | PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho | 856 | 011127 (9) | ref|XP_011097110.1| | 7e-155 | PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprote |
This contig is upended
. : . : . : . : . : . :
JMSF039E23+ GAACTGCGTATTATGNTTCATAGCCTGCCCA
____________________________________________________________
consensus GAACTGCGTATTATGNTTCATAGCCTGCCCA
. : . : . : . : . : . :
JMFF049B05+ TATGCT
JMSF039E23+ TAGAGAGTATGCAACAAAGCATGTCCAGTCCGATCAGCAGCACAGGCACAGCGGTATGCT
____________________________________________________________
consensus TAGAGAGTATGCAACAAAGCATGTCCAGTCCGATCAGCAGCACAGGCACAGCGGTATGCT
. : . : . : . : . : . :
JMFF049B05+ TGTCCGCCTTTTCCAAAATTTAGACTGTGGCCACCAAATGCACGTTGATATATTTTCCCA
JMFF002M06+ CCACCAAATGCACGTTGATATATTTTCCCA
JMFF039L11+ CCAAATGCACGTTGATATATTTTCCCA
JMSF039E23+ TGTCCGCCTTTTCCAAAATTTAGACTTTGGCCACCAAATGCACGTTGATATATTTTCCCA
JMFF009O15+ CGTTGATATATTTTCCCA
____________________________________________________________
consensus TGTCCGCCTTTTCCAAAATTTAGACTTTGGCCACCAAATGCACGTTGATATATTTTCCCA
. : . : . : . : . : . :
JMFF049B05+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF002M06+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF039L11+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMSF039E23+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF038I06+ GTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFS162C02+ TCAAGCTCTATGACTGCTTTTGGAGCT
JMFF009O15+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMSF023N21+ CTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
____________________________________________________________
consensus TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
. : . : . : . : . : . :
JMFF049B05+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF002M06+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF039L11+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF033K14+ TAGCCAATCACTTCCTTTAACAGTA
JMSF039E23+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF038I06+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFS162C02+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF009O15+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF022H02+ TGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMSF023N21+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
____________________________________________________________
consensus TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
. : . : . : . : . : . :
JMFF049B05+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTACTAGTGCAGCATTTATACCA
JMFF002M06+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF039L11+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF033K14+ TCATACATGTGCCACCTCCAATCATCNTCAGTCATATTTACTAGTGCAGCATTTATACCA
JMSF039E23+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF038I06+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFS162C02+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF009O15+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF022H02+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMSF023N21+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
____________________________________________________________
consensus TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
. : . : . : . : . : . :
JMFF049B05+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF002M06+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF039L11+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF033K14+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMSF039E23+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF038I06+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFS162C02+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF009O15+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF022H02+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMSF023N21+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
____________________________________________________________
consensus CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
. : . : . : . : . : . :
JMFF049B05+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF002M06+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF039L11+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF033K14+ AATCCATGCTCAGACAACCCAATTGCTGCTNTAAGCCNTGCACCTCCTGCACCTACCACC
JMSF039E23+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF038I06+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFS162C02+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF009O15+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF022H02+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMSF023N21+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
____________________________________________________________
consensus AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
. : . : . : . : . : . :
JMFF049B05+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF002M06+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF039L11+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF033K14+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMSF039E23+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF038I06+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFS162C02+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF009O15+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF022H02+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMSF023N21+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
____________________________________________________________
consensus ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
. : . : . : . : . : . :
JMFF049B05+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF002M06+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF039L11+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF033K14+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMSF039E23+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF038I06+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFS162C02+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF009O15+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF022H02+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMSF023N21+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
____________________________________________________________
consensus GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
. : . : . : . : . : . :
JMFF049B05+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF002M06+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF039L11+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF033K14+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATNGAATATGTATGATTTGTG
JMSF039E23+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF038I06+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFS162C02+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF009O15+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF022H02+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMSF023N21+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
____________________________________________________________
consensus CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
. : . : . : . : . : . :
JMFF049B05+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF002M06+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF039L11+ TCTGCGACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF033K14+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMSF039E23+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF038I06+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFS162C02+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF009O15+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF022H02+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMSF023N21+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
____________________________________________________________
consensus TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
. : . : . : . : . : . :
JMFF049B05+ GAAGAAGAAGAA
JMFF002M06+ GAAGAAGAAGAAGATGTTC
JMFF039L11+ GAAGAAGAAGAAGATGTTC
JMFF033K14+ GAAGAAGAAGAA
JMSF039E23+ GAAGAAGAAGAAGATGTTC
JMFF038I06+ GAAGAAGAAGAAGAT
JMFS162C02+ GAAGAAGAAGAAGATGTTCAAAAGCTAA
JMFF009O15+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGT
JMFF022H02+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACT
JMSF023N21+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACTATCC
____________________________________________________________
consensus GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACTATCC