Contig 010707:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS063E10Sequence617010707 (5)ref|XP_009779943.1|123PREDICTED: uncharacterized protein LOC104229065 [Nicotiana sylvestris]
JMFS085E10Sequence618010707 (5)ref|XP_009779943.1|123PREDICTED: uncharacterized protein LOC104229065 [Nicotiana sylvestris]
JMSF023L01Sequence645010707 (5)ref|XP_006365872.1|3e-83PREDICTED: myosin heavy chain, non-muscle-like [Solanum tuberosum]869012620 (3)ref|XP_009600962.1|7e-42PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00
JMSF034G22Sequence676010707 (5)ref|XP_006365872.1|1e-40PREDICTED: myosin heavy chain, non-muscle-like [Solanum tuberosum]824012620 (3)ref|XP_009600962.1|5e-41PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00
JMSF037C02Sequence657010707 (5)ref|XP_009779943.1|144PREDICTED: uncharacterized protein LOC104229065 [Nicotiana sylvestris]682012620 (3)ref|XP_009600962.1|5e-36PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00

Alignment

This contig is upended


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JMFS085E10+                           TCAGTCACTTCGAGATCAGCACCAAGATTATCAGCAACAGAAAA
JMFS063E10+                            CAGTCACTTCGAGATCAGCACCAAGATTATCAGCAACAGAAAA
JMSF037C02+                            CAGTCACTTCGAGATCAGCACCAAGATTATCAGCAACAGAAAA
                      ____________________________________________________________
consensus                             TCAGTCACTTCGAGATCAGCACCAAGATTATCAGCAACAGAAAA
 
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JMFS085E10+           AATGTCATCAAAATCAAAGCTAGAGTCTAAATTCACTCCCACTGACAGCTCTTCTTGTGT
JMFS063E10+           AATGTCATCAAAATCAAAGCTAGAGTCTAAATTCACTCCCACTGACAGCTCTTCTTGTGT
JMSF037C02+           AATGTCATCAAAATCAAAGCTAGAGTCTAAATTCACTCCCACTGACAGCTCTTCTTGTGT
                      ____________________________________________________________
consensus             AATGTCATCAAAATCAAAGCTAGAGTCTAAATTCACTCCCACTGACAGCTCTTCTTGTGT
 
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JMFS085E10+           ATCTGCACCTAAGCTACGGATCAAAGAAGACATTTCATCATCAGAATCTTCAGAATCCAT
JMFS063E10+           ATCTGCACCTAAGCTACGGATCAAAGAAGACATTTCATCATCAGAATCTTCAGAATCCAT
JMSF037C02+           ATCTGCACCTAAGCTACGGATCAAAGAAGACATTTCATCATCAGAATCTTCAGAATCCAT
                      ____________________________________________________________
consensus             ATCTGCACCTAAGCTACGGATCAAAGAAGACATTTCATCATCAGAATCTTCAGAATCCAT
 
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JMFS085E10+           CAGCAATTCCTGTTCCTCAATTTGCTTTTCAAGTATTTTAGCTTTCTTTAGTTCCTCTTT
JMFS063E10+           CAGCAATTCCTGTTCCTCAATTTGCTTTTCAAGTATTTTAGCTTTCTTTAGTTCCTCTTT
JMSF037C02+           CAGCAATTCCTGTTCCTCAATTTGCTTTTCAAGTATTTTAGCTTTCTTTAGTTCCTCTTT
                      ____________________________________________________________
consensus             CAGCAATTCCTGTTCCTCAATTTGCTTTTCAAGTATTTTAGCTTTCTTTAGTTCCTCTTT
 
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JMFS085E10+           GGCCTCAGAAAGTTTCCCTTCACGCTTGAATTCTAGAGCCTTCTTCTTGTGAGCAATAAC
JMFS063E10+           GGCCTCAGAAAGTTTCCCTTCACGCTTGAATTCTAGAGCCTTCTTCTTGTGAGCAATAAC
JMSF037C02+           GGCCTCAGAAAGTTTCCCTTCACGCTTGAATTCTAGAGCCTTCTTCTTGTGAGCAATAAC
                      ____________________________________________________________
consensus             GGCCTCAGAAAGTTTCCCTTCACGCTTGAATTCTAGAGCCTTCTTCTTGTGAGCAATAAC
 
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JMFS085E10+           TTGGGACTTATCAGAGGTTTGGGTTCTCTTTCCTGCATTTGGTTTTTGAGATACTTCTCC
JMFS063E10+           TTGGGACTTATCAGAGGTTTGGGTTCTCTTTCCTGCATTTGGTTTTTGAGATACTTCTCC
JMSF037C02+           TTGGGACTTATCAGAGGTTTGGGTTCTCTTTCCTGCATTTGGTTTTTGAGATACTTCTCC
                      ____________________________________________________________
consensus             TTGGGACTTATCAGAGGTTTGGGTTCTCTTTCCTGCATTTGGTTTTTGAGATACTTCTCC
 
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JMFS085E10+           AAGAAGGGCAGAGAGCTCACCCTCCAGACTCACTGTTGCTGGCTTTTTGTCAGCTTCATG
JMFS063E10+           AAGAAGGGCAGAGAGCTCACCCTCCAGACTCACTGTTGCTGGCTTTTTGTCAGCTTCATG
JMSF037C02+           AAGAAGGGCAGAGAGCTCACCCTCCAGACTCACTGTTGCTGGCTTTTTGTCAGCTTCATG
                      ____________________________________________________________
consensus             AAGAAGGGCAGAGAGCTCACCCTCCAGACTCACTGTTGCTGGCTTTTTGTCAGCTTCATG
 
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JMFS085E10+           GAGATCCATATCGGACCATCCCAGCTCTCTTAGTTCAGAGGCAAGATCATCCTTTTTTTC
JMFS063E10+           GAGATCCATATCGGACCATCCCAGCTCTCTTAGTTCAGAGGCAAGATCATCCTTTTTTTC
JMSF037C02+           GAGATCCATATCGGACCATCCCAGCTCTCTTAGTTCAGAGGCAAGATCATCCTTTTTTTC
                      ____________________________________________________________
consensus             GAGATCCATATCGGACCATCCCAGCTCTCTTAGTTCAGAGGCAAGATCATCCTTTTTTTC
 
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JMFS085E10+           ACTTGTTTGAGAGGACTTACTTTTCCTACTAGATCCAATGGATTCATCAGTATCTCTATG
JMFS063E10+           ACTTGTTTGAGAGGACTTACTTTTCCTACTAGATCCAATGGATTCATCAGTATCTCTATG
JMSF037C02+           ACTTGTTTGAGAGGACTTACTTTTCCTACTAGATCCAATGGATTCATCAGTATCTCTATG
JMSF034G22+                  TGAGAGGACTTACTTTTCCTACTAGATCCAATGGATTCATCAGTATCTCTATG
                      ____________________________________________________________
consensus             ACTTGTTTGAGAGGACTTACTTTTCCTACTAGATCCAATGGATTCATCAGTATCTCTATG
 
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JMFS085E10+           GATGTCTGAGAAGTTGCTGGAAGACAAAGCCCTTTTACGATTTTTCCTAAGCTGCACCTC
JMFS063E10+           GATGTCTGAGAAGTTGCTGGAAGACAAAGCCCTTTTACGATTTTTCCTAAGCTGCACCTC
JMSF037C02+           GATGTCTGAGAAGTTGCTGGAAGACAAAGCCCTTTTACGATTTTTCCTAAGCTGCACCTC
JMSF034G22+           GATGTCTGAGAAGTTGCTGGAAGACAAAGCCCTTTTACGATTTTTCCTAAGCTGCACCTC
                      ____________________________________________________________
consensus             GATGTCTGAGAAGTTGCTGGAAGACAAAGCCCTTTTACGATTTTTCCTAAGCTGCACCTC
 
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JMFS085E10+           CAAAGCTGCAGCCTGTCTCTCAAGCTCTTTCCCC                          
JMFS063E10+           CAAAGCTGCAGCCTGTCTCTCAAGCTCTTTCCCC                          
JMSF037C02+           CAAAGCTGCAGCCTGTCTCTCAAGCTCTTTCCCCCTTTTAAAGGCTCTGAGGGCTTCTTC
JMSF034G22+           CAAAGCTGCAGCCTGTCTCTCAAGCTCTTTCCCCCTTTTAAAGGCTCTGAGGGCTTCTTC
                      ____________________________________________________________
consensus             CAAAGCTGCAGCCTGTCTCTCAAGCTCTTTCCCCCTTTTAAAGGCTCTGAGGGCTTCTTC
 
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JMSF037C02+           AGATTTTCCTTCT                                               
JMSF034G22+           AGATTTTCCTTCTGCTTTTAAAGTTCGATGCTTCTTCTTTTCATCCATAGCTTGCTGGCG
JMSF023L01+                          TTTTAAAGTTCGATGCTTCTTCTTTTCATCCATAGCTTGCTGGCG
                      ____________________________________________________________
consensus             AGATTTTCCTTCTGCTTTTAAAGTTCGATGCTTCTTCTTTTCATCCATAGCTTGCTGGCG
 
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JMSF034G22+           TAATTCTTCAGGAGTAGTGGATACCATCTCATTCAACACTTGACTTGGGTGATGATCTGC
JMSF023L01+           TAATTCTTCAGGAGTAGTGGATACCATCTCATTCAACACTTGACTTGGGTGATGATCTGC
                      ____________________________________________________________
consensus             TAATTCTTCAGGAGTAGTGGATACCATCTCATTCAACACTTGACTTGGGTGATGATCTGC
 
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JMSF034G22+           ATGCTGACCTCCTACCCCATCCTTAGTGGAGACTTCTTGACTGTGTGAAGATGAAGCAAC
JMSF023L01+           ATGCTGACCTCCTACCCCATCCTTAGTGGAGACTTCTTGACTGTGTGAAGATGAAGCAAC
                      ____________________________________________________________
consensus             ATGCTGACCTCCTACCCCATCCTTAGTGGAGACTTCTTGACTGTGTGAAGATGAAGCAAC
 
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JMSF034G22+           ATGTGTCTGTTGATCATGGGAAAGTCTGCCTGATGAAATTGATTCCTTCTGTTCATAGCC
JMSF023L01+           ATGTGTCTGTTGATCATGGGAAAGTCTGCCTGATGAAATTGATTCCTTCTGTTCATAGCC
                      ____________________________________________________________
consensus             ATGTGTCTGTTGATCATGGGAAAGTCTGCCTGATGAAATTGATTCCTTCTGTTCATAGCC
 
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JMSF034G22+           CAGGATCTGATTTAAAACTTCATCCTCATTCTTAGATGCATGTTTTGAACCACCTT    
JMSF023L01+           CAGGATCTGATTTAAAACTTCATCCTCATTCTTAGATGCATGTTTTGAACCACCTTTTCC
                      ____________________________________________________________
consensus             CAGGATCTGATTTAAAACTTCATCCTCATTCTTAGATGCATGTTTTGAACCACCTTTTCC
 
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JMSF023L01+           TGCTCTTTTGTTTCCATATCTCATTTCAAACCGTGCAGCTTCCTCTAACGTTTTGCAGGG
                      ____________________________________________________________
consensus             TGCTCTTTTGTTTCCATATCTCATTTCAAACCGTGCAGCTTCCTCTAACGTTTTGCAGGG
 
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JMSF023L01+           TGCACAAATACGAACTGGTGAATCACCTTGTCCACGTAATATCATCCTCTGCTGGGTACA
                      ____________________________________________________________
consensus             TGCACAAATACGAACTGGTGAATCACCTTGTCCACGTAATATCATCCTCTGCTGGGTACA
 
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JMSF023L01+           ACTATTGCAAAATATGCCACCACACCTGCGACAATGATGCTTGCGATTGATGAAGGTGAA
                      ____________________________________________________________
consensus             ACTATTGCAAAATATGCCACCACACCTGCGACAATGATGCTTGCGATTGATGAAGGTGAA
 
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JMSF023L01+           CTGTGAAGAACAACCTTGGCAATGTGAGGCATCAACTACCCAATTATTGCCTCGCAGTGA
                      ____________________________________________________________
consensus             CTGTGAAGAACAACCTTGGCAATGTGAGGCATCAACTACCCAATTATTGCCTCGCAGTGA
 
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JMSF023L01+           TGGCTTCGAGGGCAAACCGATCTTCTCCAACATCTTTATTACTTGCTTTTCTCTCCGGAA
                      ____________________________________________________________
consensus             TGGCTTCGAGGGCAAACCGATCTTCTCCAACATCTTTATTACTTGCTTTTCTCTCCGGAA
 
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JMSF023L01+           ACAAAACAGAGATTTCCGTCCCCAGATTCAACCGGAAAGCTTCGCTGACTCTGTAAACTC
                      ____________________________________________________________
consensus             ACAAAACAGAGATTTCCGTCCCCAGATTCAACCGGAAAGCTTCGCTGACTCTGTAAACTC