Contig 010700:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040H22+                                                 GCCTGAAAAGGATTATTAAAA
                      ____________________________________________________________
consensus                                                    GCCTGAAAAGGATTATTAAAA
 
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rJMSF040H22+          ATCTGTATCCCTGTTATGANGACCNGTCAAGAAAATCTGCTCAGTTTTTGACTTTTTTTG
                      ____________________________________________________________
consensus             ATCTGTATCCCTGTTATGANGACCNGTCAAGAAAATCTGCTCAGTTTTTGACTTTTTTTG
 
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rJMSF040H22+          TACTCATCTAGTCATCACATANTCATTAAAGATTGCATATCCTGNGAAATTGGCATTATA
                      ____________________________________________________________
consensus             TACTCATCTAGTCATCACATANTCATTAAAGATTGCATATCCTGNGAAATTGGCATTATA
 
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rJMSF040H22+          TGGCATGAATGTATGCATTTATTTGTTTTTTTTTGGGCACAAATAGCCATACTTTGCATA
                      ____________________________________________________________
consensus             TGGCATGAATGTATGCATTTATTTGTTTTTTTTTGGGCACAAATAGCCATACTTTGCATA
 
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rJMSF040H22+          TAAGAGCAATTGCATAACAGAAGTTCCAAATCTGAAAATAATCCTTATGGAATATAATTC
                      ____________________________________________________________
consensus             TAAGAGCAATTGCATAACAGAAGTTCCAAATCTGAAAATAATCCTTATGGAATATAATTC
 
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rJMSF040H22+          AGCTAAAATGGGTGATTACCTCTGTGGATTTCTTTTATGCTTATTGTTCATCGATAATAC
                      ____________________________________________________________
consensus             AGCTAAAATGGGTGATTACCTCTGTGGATTTCTTTTATGCTTATTGTTCATCGATAATAC
 
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rJMSF040H22+          TAATTATTTGATATAGGCCATAGATGTAGAGATTTATCTCATATCTTAAATCTTAAACCT
                      ____________________________________________________________
consensus             TAATTATTTGATATAGGCCATAGATGTAGAGATTTATCTCATATCTTAAATCTTAAACCT
 
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rJMSF040H22+          AGCATTGCCCAGAATGTGAATTCATAGCNCTAATTATATGATAATAGCACTAGGACAATT
                      ____________________________________________________________
consensus             AGCATTGCCCAGAATGTGAATTCATAGCNCTAATTATATGATAATAGCACTAGGACAATT
 
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rJMSF040H22+          TTTATGACTAATGTCAAATTGACTTAATTCTGATTTGGAAGTCAATGATTATTTGTCCAA
                      ____________________________________________________________
consensus             TTTATGACTAATGTCAAATTGACTTAATTCTGATTTGGAAGTCAATGATTATTTGTCCAA
 
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rJMSF040H22+          ATTCATGCATATTGATGGTGCTAGTTTTTATCATAAAATTATATGGCATGAGTCTTGAAT
                      ____________________________________________________________
consensus             ATTCATGCATATTGATGGTGCTAGTTTTTATCATAAAATTATATGGCATGAGTCTTGAAT
 
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rJMSF040H22+          CTTGAATATCTCATATCTGNGTATCAAAACAAAATAATAGTGCATATTTTTAATAAAATT
                      ____________________________________________________________
consensus             CTTGAATATCTCATATCTGNGTATCAAAACAAAATAATAGTGCATATTTTTAATAAAATT
 
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rJMSF040H22+          TTGCCCAGGGGTAAACACTTGCATCACTAATTTTTTTTTGACACCTTTTGGTCTAAAACC
                      ____________________________________________________________
consensus             TTGCCCAGGGGTAAACACTTGCATCACTAATTTTTTTTTGACACCTTTTGGTCTAAAACC
 
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rJMSF040H22+          ATCAGTTGTGAATATTTGATCTACAAGGATCTATAGACCCTAAGTAAATCCCTGAAGGAT
JMSF023C05-                      ATATTTGATCTAAAAGGATCTATAGACCCTAAGTCAATCCCTAAAGGAT
                      ____________________________________________________________
consensus             ATCAGTTGTGAATATTTGATCTACAAGGATCTATAGACCCTAAGTCAATCCCTGAAGGAT
 
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rJMSF040H22+          ATTTGGTGTATG                                                
JMSF023C05-           ATTTGGTGTATGTTATTTCGTGTATGCGGGTCTCATTGTCAATGGTCGTATTGTACTCTA
                      ____________________________________________________________
consensus             ATTTGGTGTATGTTATTTCGTGTATGCGGGTCTCATTGTCAATGGTCGTATTGTACTCTA
 
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JMSF023C05-           GTAATAGTATATGACAAAATTATGCTAAGTGTTTGGTCATTGGGCTATTTTTAATAAGGT
                      ____________________________________________________________
consensus             GTAATAGTATATGACAAAATTATGCTAAGTGTTTGGTCATTGGGCTATTTTTAATAAGGT
 
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JMSF023C05-           CTGGAAGACCCTGGATGTGAATTGATATTTAAAGTGACTAATGACTTATGAATGAAGTTT
                      ____________________________________________________________
consensus             CTGGAAGACCCTGGATGTGAATTGATATTTAAAGTGACTAATGACTTATGAATGAAGTTT
 
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JMSF023C05-           GCAACTTCTATTTCTAATGCTATGATACTCTCTGAAAGTCAAAATTGACTCACATCATGT
                      ____________________________________________________________
consensus             GCAACTTCTATTTCTAATGCTATGATACTCTCTGAAAGTCAAAATTGACTCACATCATGT
 
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JMSF023C05-           TGGTTTGCCTGAAGCAAACAAGTTGTGTTTTTTTTACACATAATCACTGCCTGAAAATTC
                      ____________________________________________________________
consensus             TGGTTTGCCTGAAGCAAACAAGTTGTGTTTTTTTTACACATAATCACTGCCTGAAAATTC
 
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JMSF023C05-           TGACCGGCACGGTTTGAAAATTAAATTCGTGAAAAATACTTCTTGAACTCCTTTTGGCAT
                      ____________________________________________________________
consensus             TGACCGGCACGGTTTGAAAATTAAATTCGTGAAAAATACTTCTTGAACTCCTTTTGGCAT
 
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JMSF023C05-           GGAATTTTTTCTGGAGAACCTAGACTCATGGTATTTGATGTCTATAAAAATATTTTGTTA
                      ____________________________________________________________
consensus             GGAATTTTTTCTGGAGAACCTAGACTCATGGTATTTGATGTCTATAAAAATATTTTGTTA
 
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JMSF023C05-           AAAATATGCTTTGGTTATTCTAGAAAAATTGTAAAGTTTTGGCAGTGTGCTGCCAATTAT
                      ____________________________________________________________
consensus             AAAATATGCTTTGGTTATTCTAGAAAAATTGTAAAGTTTTGGCAGTGTGCTGCCAATTAT
 
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JMSF023C05-           TTTTCTTCCTGGAGCAATGTTGGAAAAAATCTCGGGAAAAATACTTTTACACCTTGGATT
                      ____________________________________________________________
consensus             TTTTCTTCCTGGAGCAATGTTGGAAAAAATCTCGGGAAAAATACTTTTACACCTTGGATT
 
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JMSF023C05-           GGCATGAAAATTTTCATGTACGTTCTATACTTGATGANCTACATATATGTAAAATTTTGT
                      ____________________________________________________________
consensus             GGCATGAAAATTTTCATGTACGTTCTATACTTGATGANCTACATATATGTAAAATTTTGT