Contig 010699:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS066A09Sequence618010699 (3)ref|XP_011100716.1|5e-60PREDICTED: E3 ubiquitin-protein ligase UPL6 isoform X1 [Sesamum indicum]
JMFS125B07Sequence565010699 (3)ref|XP_009769688.1|8e-59PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Nicotiana sylvestris]
JMSF023B02Sequence660010699 (3)ref|XP_011100717.1|2e-63PREDICTED: E3 ubiquitin-protein ligase UPL6 isoform X2 [Sesamum indicum]733020386ref|XP_004157028.1|6e-62PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]

Alignment

This contig is upended


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JMFS066A09+                                     TCCATTCCAGCAAAGATGCTAACAATATCCCCAG
JMSF023B02+           CCACTAATGCACGGTNGGAATCATATTCCATTCCAGCAAAGATGCTAACAATATCCCCAG
                      ____________________________________________________________
consensus             CCACTAATGCACGGTNGGAATCATATTCCATTCCAGCAAAGATGCTAACAATATCCCCAG
 
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JMFS066A09+           TATGTTGAACAAGTTCTTTTAACAAACAGCATGCTTTCACAATGACAGAANAATCAGCAG
JMFS125B07+                TGAACAAGTTCTTTTAACAAACAGCATGCTTTCACAATGACAGAAAAATCAGCAG
JMSF023B02+           TATGTTGAACAAGTTCTTTTAACAAACAGCATGCTTTCACAATGACAGAAAAATCAGCAG
                      ____________________________________________________________
consensus             TATGTTGAACAAGTTCTTTTAACAAACAGCATGCTTTCACAATGACAGAAAAATCAGCAG
 
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JMFS066A09+           CATCTGTAGGATTAAAGAAGAAAAGCAGCTGGCGAAGAAAGTCTGAATCTGGACCAAAGG
JMFS125B07+           CATCTGTAGGATTAAAGAAGAAAAGCAGCTGGCGAAGAAAGTCTGAATCTGGACCAAAGG
JMSF023B02+           CATCTGTAGGATTAAAGAAGAAAAGCAGCTGGCGAAGAAAGTCTGAATCTGGACCAAAGG
                      ____________________________________________________________
consensus             CATCTGTAGGATTAAAGAAGAAAAGCAGCTGGCGAAGAAAGTCTGAATCTGGACCAAAGG
 
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JMFS066A09+           ACTGCCTCTCAACATGTTGGCAGTGGTCCCCATAAGTATTGAAAAATGATTCACGCACTC
JMFS125B07+           ACTGCCTCTCAACATGTTGGCAGTGGTCCCCATAAGTATTGAAAAATGATTCACGCACTC
JMSF023B02+           ACTGCCTCTCAACATGTTGGCAGTGGTCCCCATAAGTATTGAAAAATGATTCACGCACTC
                      ____________________________________________________________
consensus             ACTGCCTCTCAACATGTTGGCAGTGGTCCCCATAAGTATTGAAAAATGATTCACGCACTC
 
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JMFS066A09+           TGGACTGTTCAGCTTTAACTGCCTTTCTTCCTCTGAAGCATTTCTGAATTTTGATGGCAG
JMFS125B07+           TGGACTGTTCAGCTTTAACTGCCTTTCTTCCTCTGAAGCATTTCTGAATTTTGATGGCAG
JMSF023B02+           TGGACTGTTCAGCTTTAACTGCCTTTCTTCCTCTGAAGCATTTCTGAATTTTGATGGCAG
                      ____________________________________________________________
consensus             TGGACTGTTCAGCTTTAACTGCCTTTCTTCCTCTGAAGCATTTCTGAATTTTGATGGCAG
 
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JMFS066A09+           CCGAGTTCTGCTGACGCAAGTACTGCCGGCGATTACGCTCCTGCCGAGCCTGCTCCAGAA
JMFS125B07+           CCGAGTTCTGCTGACGCAAGTACTGCCGGCGATTACGCTCCTGCCGAGCCTGCTCCAGAA
JMSF023B02+           CCGAGTTCTGCTGACGCAAGTACTGCCGGCGATTACGCTCCTGCCGAGCCTGCTCCAGAA
                      ____________________________________________________________
consensus             CCGAGTTCTGCTGACGCAAGTACTGCCGGCGATTACGCTCCTGCCGAGCCTGCTCCAGAA
 
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JMFS066A09+           GCTTCTGTCGGTCGCGTTCCTTGGAGCTTCGGCCGCCTAAATCGACTCGCTTCCGCGACG
JMFS125B07+           GCTTCTGTCGGTCGCGTTCCTTGGAGCTTCGGCCGCCTAAATCGACTCGCTTCCGCGACG
JMSF023B02+           GCTTCTGTCGGTCGCGTTCCTTGGAGCTTCGGCCGCCTAAATCGACTCGCTTCCGCGACG
                      ____________________________________________________________
consensus             GCTTCTGTCGGTCGCGTTCCTTGGAGCTTCGGCCGCCTAAATCGACTCGCTTCCGCGACG
 
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JMFS066A09+           AAGGATCACCGCTGAAAAACATTGTTTCACCTCTCCGCGGCGAACTCTTACCCTAATTCC
JMFS125B07+           AAGGATCACCGCTGAAAAACATTGTTTCACCTCTCCGCGGCGAACTCTTACCCTAATTCC
JMSF023B02+           AAGGATCACCGCTGAAAAACATTGTTTCACCTCTCCGCGGCGAACTCTTACCCTAATTCC
                      ____________________________________________________________
consensus             AAGGATCACCGCTGAAAAACATTGTTTCACCTCTCCGCGGCGAACTCTTACCCTAATTCC
 
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JMFS066A09+           ACGCGCAATTAGCTGAGAACCGATTCTGCTGTAATTTGCGTTTGCCGTACACTGAGTTCC
JMFS125B07+           ACGCGCAATTAGCTGAGAACCGATTCTGCTGTAATTTGCGTTTGCCGTACACTGAGTTCC
JMSF023B02+           ACGCGCAATTAGCTGAGAACCGATTCTGCTGTAATTTGCGTTTGCCGTACACTGAGTTCC
                      ____________________________________________________________
consensus             ACGCGCAATTAGCTGAGAACCGATTCTGCTGTAATTTGCGTTTGCCGTACACTGAGTTCC
 
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JMFS066A09+           CGATCGGGAAAGGGAAACGAAAAAAGGCTCTCGACTATATAGACTGAATTGTTCGGTTTT
JMFS125B07+           CGATCGGGAAAGGGAAACGAAAAAAGGCTCTCGACTATATAGACTGAATTGTTCGGTTTT
JMSF023B02+           CGATCGGGAAAGGGAAACGAAAAAAGGCTCTCGACTATATAGACTGAATTGTTCGGTTTT
                      ____________________________________________________________
consensus             CGATCGGGAAAGGGAAACGAAAAAAGGCTCTCGACTATATAGACTGAATTGTTCGGTTTT
 
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JMFS066A09+           CGTCTCTGCAGTCTACAAAAGTCCGCTTGTGCATTATG                      
JMFS125B07+           CGTCTCTGCAGTCTACAAAAGTCCGCTTGT                              
JMSF023B02+           CGTCTCTGCAGTCTACAAAAGTCCGCTTGTGCATTATGTATCATGAAGCAAAGTTCATTC
                      ____________________________________________________________
consensus             CGTCTCTGCAGTCTACAAAAGTCCGCTTGTGCATTATGTATCATGAAGCAAAGTTCATTC