Contig 010696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022N01Sequence616010696 (2)571010696 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF022N01+ GACACTGAAAATCAGA
JMSF022N01- GACACTGAAAATCAGA
                      ____________________________________________________________
consensus GACACTGAAAATCAGA
 
. : . : . : . : . : . :
rJMSF022N01+ ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
JMSF022N01- ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
                      ____________________________________________________________
consensus ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
 
. : . : . : . : . : . :
rJMSF022N01+ AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
JMSF022N01- AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
                      ____________________________________________________________
consensus AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
 
. : . : . : . : . : . :
rJMSF022N01+ TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
JMSF022N01- TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
                      ____________________________________________________________
consensus TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
 
. : . : . : . : . : . :
rJMSF022N01+ TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
JMSF022N01- TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
                      ____________________________________________________________
consensus TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
 
. : . : . : . : . : . :
rJMSF022N01+ TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
JMSF022N01- TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
                      ____________________________________________________________
consensus TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
 
. : . : . : . : . : . :
rJMSF022N01+ ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
JMSF022N01- ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
                      ____________________________________________________________
consensus ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
 
. : . : . : . : . : . :
rJMSF022N01+ GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
JMSF022N01- GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
                      ____________________________________________________________
consensus GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
 
. : . : . : . : . : . :
rJMSF022N01+ ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
JMSF022N01- ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
                      ____________________________________________________________
consensus ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
 
. : . : . : . : . : . :
rJMSF022N01+ GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
JMSF022N01- GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
                      ____________________________________________________________
consensus GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
 
. : . : . : . : . : . :
rJMSF022N01+ ATTTCCCTGTCAGTG
JMSF022N01- ATTTCCCTGTCAGTGTACGTACAAATAAATATTTCTAGTGTTTGCTTAACTATTACTCCG
                      ____________________________________________________________
consensus ATTTCCCTGTCAGTGTACGTACAAATAAATATTTCTAGTGTTTGCTTAACTATTACTCCG