Contig 010696:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022N01+                                                      GACACTGAAAATCAGA
JMSF022N01-                                                       GACACTGAAAATCAGA
                      ____________________________________________________________
consensus                                                         GACACTGAAAATCAGA
 
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rJMSF022N01+          ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
JMSF022N01-           ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
                      ____________________________________________________________
consensus             ACATACTTACAGATTAGGTAGGGATTGATGGCAAGATACTATGTTGTGGGGGCTGATGGT
 
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rJMSF022N01+          AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
JMSF022N01-           AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
                      ____________________________________________________________
consensus             AGCCATGCCGCCGCCGCCGCAGCGGCGGCAGGCAGTAGTTTTGGCTTAATGATGATGTTT
 
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rJMSF022N01+          TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
JMSF022N01-           TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
                      ____________________________________________________________
consensus             TGCGCGGTTGTTATGTCTGCCATAATCATAATTCCTATGATCATCTTTGCTTGTGGAGAC
 
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rJMSF022N01+          TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
JMSF022N01-           TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
                      ____________________________________________________________
consensus             TCTAACAACGTCGATGATGGAAAGACCCAGAGGTCCCAGAACACCACAGCAGGACATGAT
 
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rJMSF022N01+          TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
JMSF022N01-           TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
                      ____________________________________________________________
consensus             TCAAGCAGTGCATCCACAATAGGAGGTATCGTCTCAAACTCGGCCCATTCAGCAAGTGTT
 
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rJMSF022N01+          ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
JMSF022N01-           ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
                      ____________________________________________________________
consensus             ATGAACGCATTTAGCGGCGGCCGCGGCGGCTTTTAAATATATATGCATGTATGTGTGTAT
 
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rJMSF022N01+          GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
JMSF022N01-           GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
                      ____________________________________________________________
consensus             GCGCGCGTCTATGTGGTTTATATATAATTTATTATTATGGTGTACAAGAGTGAGTCCCCA
 
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rJMSF022N01+          ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
JMSF022N01-           ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
                      ____________________________________________________________
consensus             ACTCCCCATACGCCATATTAATAAATTAAAGTAAAATCTGTACTCTATGTGATGTTTGGT
 
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rJMSF022N01+          GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
JMSF022N01-           GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
                      ____________________________________________________________
consensus             GTAGTGCAAGTTAAGCTTAATTGTGTATATGTTCGTACCCTCTCACTTCACATTGTGCTT
 
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rJMSF022N01+          ATTTCCCTGTCAGTG                                             
JMSF022N01-           ATTTCCCTGTCAGTGTACGTACAAATAAATATTTCTAGTGTTTGCTTAACTATTACTCCG
                      ____________________________________________________________
consensus             ATTTCCCTGTCAGTGTACGTACAAATAAATATTTCTAGTGTTTGCTTAACTATTACTCCG