Contig 010695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036A04Sequence564010695 (4)gb|EYU35110.1|8e-56hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]
JMFN036P09Sequence631010695 (4)gb|EYU35110.1|2e-55hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]
JMSF022M15Sequence659010695 (4)gb|EYU35110.1|3e-55hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]650010695 (4)gb|EYU35110.1|3e-55hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN036P09+                                                                  TCCAT
                      ____________________________________________________________
consensus                                                                    TCCAT
 
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JMFN036P09+           TTGATCATTAAGATGTCTTACATCATGGAAGAAGATAAGAAAATATCTAGAAAGTACAAC
rJMSF022M15-                    AGATGTCTTACATCATGGAAGAAGATAAGAAAATATCTAGAAAGTACAAC
JMSF022M15+            TGATCATTAAGATGTCTTACATCATGGAAGAAGATAAGAAAATATCTAGAAAGTACAAC
                      ____________________________________________________________
consensus             TTGATCATTAAGATGTCTTACATCATGGAAGAAGATAAGAAAATATCTAGAAAGTACAAC
 
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JMFN036P09+           ATTGCAAGTGTAGCCAGAAGGGAATGATTTGCGCCCTGGGGAAACAAGCATGACAGCAAT
rJMSF022M15-          ATTGCAAGTGTAGCCAGAAGGGAATGATTTGCGCCCTGGGGAAACAAGCATGACAGCAAT
JMSF022M15+           ATTGCAAGTGTAGCCAGAAGGGAATGATTTGCGCCCTGGGGAAACAAGCATGACAGCAAT
                      ____________________________________________________________
consensus             ATTGCAAGTGTAGCCAGAAGGGAATGATTTGCGCCCTGGGGAAACAAGCATGACAGCAAT
 
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JMFN036P09+           TTCAAGTCCTTTTCTCCACTCCCAGAAGAACAAAGTAAAACTAAATAATCATCTCTGATC
rJMSF022M15-          TTCAAGTCCTTTTCTCCACTCCCAGAAGAACAAAGTAAAACTAAATAATCATCTCTGATC
JMSF022M15+           TTCAAGTCCTTTTCTCCACTCCCAGAAGAACAAAGTAAAACTAAATAATCATCTCTGATC
                      ____________________________________________________________
consensus             TTCAAGTCCTTTTCTCCACTCCCAGAAGAACAAAGTAAAACTAAATAATCATCTCTGATC
 
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JMFN036P09+           AAAAGGTTACCCCATCTATTTCTCATCCATTGGGGTTGCTTCGTCTGATGGGGAGTTACT
rJMSF022M15-          AAAAGGTTACCCCATCTATTTCTCATCCATTGGGGTTGCTTCGTCTGATGGGGAGTTACT
JMFN036A04+                    CCCCATCTATTTCTCATCCATTGGGGTTGCTTCGTCTGATGGGGAGTTACT
JMSF022M15+           AAAAGGTTACCCCATCTATTTCTCATCCATTGGGGTTGCTTCGTCTGATGGGGAGTTACT
                      ____________________________________________________________
consensus             AAAAGGTTACCCCATCTATTTCTCATCCATTGGGGTTGCTTCGTCTGATGGGGAGTTACT
 
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JMFN036P09+           TCCATCTTCACCATTTGCTGGTCCACAAAGGGATTTGCGGTATCTTGTTTGCTGTTGTGT
rJMSF022M15-          TCCATCTTCACCATTTGCTGGTCCACAAAGGGATTTGCGGTATCTTGTTTGCTGTTGTGT
JMFN036A04+           TCCATCTTCACCATTTGCTGGTCCACAAAGGGATTTGCGGTATCTTGTTTGCTGTTGTGT
JMSF022M15+           TCCATCTTCACCATTTGCTGGTCCACAAAGGGATTTGCGGTATCTTGTTTGCTGTTGTGT
                      ____________________________________________________________
consensus             TCCATCTTCACCATTTGCTGGTCCACAAAGGGATTTGCGGTATCTTGTTTGCTGTTGTGT
 
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JMFN036P09+           TGGCTGCAACTTTGGACGAAGTGCCTCAAGTGGCCCTTTAGGCTTCTCTACACCTTGCTT
rJMSF022M15-          TGGCTGCAACTTTGGACGAAGTGCCTCAAGTGGCCCTTTAGGCTTCTCTACACCTTGCTT
JMFN036A04+           TGGCTGCAACTTTGGACGAAGTGCCTCAAGTGGCCCTTTAGGCTTCTCTACACCTTGCTT
JMSF022M15+           TGGCTGCAACTTTGGACGAAGTGCCTCAAGTGGCCCTTTAGGCTTCTCTACACCTTGCTT
                      ____________________________________________________________
consensus             TGGCTGCAACTTTGGACGAAGTGCCTCAAGTGGCCCTTTAGGCTTCTCTACACCTTGCTT
 
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JMFN036P09+           TCCAAGAGCCCAATCAGCAGAATCAAAATAAGCACGCTCATGGTCCTTAGAGATCAATGG
rJMSF022M15-          TCCAAGAGCCCAATCAGCAGAATCAAAATAAGCACGCTCATGGTCCTTAGAGATCAATGG
JMFN036A04+           TCCAAGAGCCCAATCAGCAGAATCAAAATAAGCACGCTCATGGTCCTTAGAGATCAATGG
JMSF022M15+           TCCAAGAGCCCAATCAGCAGAATCAAAATAAGCACGCTCATGGTCCTTAGAGATCAATGG
                      ____________________________________________________________
consensus             TCCAAGAGCCCAATCAGCAGAATCAAAATAAGCACGCTCATGGTCCTTAGAGATCAATGG
 
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JMFN036P09+           TGGTTTCTTGGGCATGATTCCTCCATATTTTTTCTTAACAACCTCTTGTTCCTGTTGGGA
rJMSF022M15-          TGGTTTCTTGGGCATGATTCCTCCATATTTTTTCTT                        
JMFN036A04+           TGGTTTCTTGGGCATGATTCCTCCATATTTTTTCTTAACAACCTCTTGTTCCTGTTGGGA
JMSF022M15+           TGGTTTCTTGGGCATGATTCCTCCATATTTTTTCTTAACAACCTCTTGTTCCTGTTGGGA
                      ____________________________________________________________
consensus             TGGTTTCTTGGGCATGATTCCTCCATATTTTTTCTTAACAACCTCTTGTTCCTGTTGGGA
 
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JMFN036P09+           TGATGGCATGGATATTTCAGATTTTTCTGTAACACCTCCCTCTGTTTGCCCTTTGACATC
JMFN036A04+           TGATGGCATGGATATTTCAGATTTTTCTGTAACACCTCCCTCTGTTTGCCCTTTGACATC
JMSF022M15+           TGATGGCATGGATATTTCAGATTTTTCTGTAACACCTCCCTCTGTTTGCCCTTTGACATC
                      ____________________________________________________________
consensus             TGATGGCATGGATATTTCAGATTTTTCTGTAACACCTCCCTCTGTTTGCCCTTTGACATC
 
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JMFN036P09+           CTCCATACCTGACATGCTTTTGCAAACTAGTACAAAATAACTCTCGACCGAGCTGAAGAG
JMFN036A04+           CTCCATACCTGACATGCTTTTGCAAACTAGTACAAAATAACTCTCGACCGAGCTGAAGAG
JMSF022M15+           CTCCATACCTGACATGCTTTTGCAAACTAGTACAAAATAACTCTCGACCGAGCTGAAGAG
                      ____________________________________________________________
consensus             CTCCATACCTGACATGCTTTTGCAAACTAGTACAAAATAACTCTCGACCGAGCTGAAGAG
 
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JMFN036P09+           ACGCACACCTGTTGGGCTAGAGACGA                                  
JMFN036A04+           ACGCACACCTGTTGGGCTAGAGACGA                                  
JMSF022M15+           ACGCACACCTGTTGGGCTAGAGACGATTCGGTCGTGAATGATTACTCAATCACAGTTACC
                      ____________________________________________________________
consensus             ACGCACACCTGTTGGGCTAGAGACGATTCGGTCGTGAATGATTACTCAATCACAGTTACC