| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043C22 | Sequence | 644 | 010694 (6) | ref|XP_010262086.1| | 1e-07 | PREDICTED: zinc finger protein NUTCRACKER isoform X2 [Nelumbo nucifera] | 560 | 002670 (5) | ref|XP_009774627.1| | 2e-12 | PREDICTED: zinc finger protein NUTCRACKER-like [Nicotiana sylvestris] ref|XP_009 |
| JMFF043E14 | Sequence | 557 | 010694 (6) | 561 | 002670 (5) | ref|XP_009774627.1| | 2e-12 | PREDICTED: zinc finger protein NUTCRACKER-like [Nicotiana sylvestris] ref|XP_009 | |||
| JMFF050B07 | Sequence | 555 | 010694 (6) | 560 | 002670 (5) | ref|XP_006342974.1| | 4e-13 | PREDICTED: zinc finger protein MAGPIE-like isoform X1 [Solanum tuberosum] ref|X | |||
| JMFS121E09 | Sequence | 559 | 010694 (6) | ||||||||
| JMSF022L09 | Sequence | 488 | 010694 (6) | ||||||||
| JMSF025A14 | Sequence | 667 | 010694 (6) | ref|XP_010242235.1| | 4e-115 | PREDICTED: zinc finger protein NUTCRACKER-like isoform X2 [Nelumbo nucifera] | 758 | 002670 (5) | ref|XP_009626387.1| | 1e-21 | PREDICTED: zinc finger protein NUTCRACKER-like [Nicotiana tomentosiformis] ref|X |
This contig is upended
. : . : . : . : . : . :
JMSF025A14+ GAGAAAAGGGTTCCACAGTCACATCTGTATTCTCTTGTG
____________________________________________________________
consensus GAGAAAAGGGTTCCACAGTCACATCTGTATTCTCTTGTG
. : . : . : . : . : . :
JMSF025A14+ CCACAGGTTTTGGAGTGAGCTTTCCAGTCAGATTGAACTGCATATCTCTTTGAGCACTTG
____________________________________________________________
consensus CCACAGGTTTTGGAGTGAGCTTTCCAGTCAGATTGAACTGCATATCTCTTTGAGCACTTG
. : . : . : . : . : . :
JMSF025A14+ TCACATTTCCACTTCTTCTCCCCATGCTTTCTGCAAAAGTGTTTCTTGATCCCAGTGAGG
____________________________________________________________
consensus TCACATTTCCACTTCTTCTCCCCATGCTTTCTGCAAAAGTGTTTCTTGATCCCAGTGAGG
. : . : . : . : . : . :
JMSF025A14+ TCACCCAGGGCCCTGGCTGGTTCATGGTGGACACAGCTCGCCTCTGGGCACACATACACC
____________________________________________________________
consensus TCACCCAGGGCCCTGGCTGGTTCATGGTGGACACAGCTCGCCTCTGGGCACACATACACC
. : . : . : . : . : . :
JMSF025A14+ TTCTTCCTTATCACTTCCTTGTTGCTTCTCTGCTTCAGCTTCCATGGCAGATTGTGACCC
____________________________________________________________
consensus TTCTTCCTTATCACTTCCTTGTTGCTTCTCTGCTTCAGCTTCCATGGCAGATTGTGACCC
. : . : . : . : . : . :
JMSF025A14+ CTTCTGTGAAGCTGCAGATTCTGGTCCCTCTGAAACCCTTTGTTGCAAATTTCACACACA
____________________________________________________________
consensus CTTCTGTGAAGCTGCAGATTCTGGTCCCTCTGAAACCCTTTGTTGCAAATTTCACACACA
. : . : . : . : . : . :
JMSF025A14+ AATCTGTTGGTTGCCATCAGAGTCTTGGGTGACAAAGCTATCACTTCTGCATCAGGGTCT
____________________________________________________________
consensus AATCTGTTGGTTGCCATCAGAGTCTTGGGTGACAAAGCTATCACTTCTGCATCAGGGTCT
. : . : . : . : . : . :
JMSF025A14+ GGATTTCCTGGTTGGTTTCTCTTCTTCTTGACTGGTTGAGACTGATTTGGGTTAGCAAAG
JMFF043C22+ TGACTGGTTGAGACTGATTTGGGTTAGCAAAG
____________________________________________________________
consensus GGATTTCCTGGTTGGTTTCTCTTCTTCTTGACTGGTTGAGACTGATTTGGGTTAGCAAAG
. : . : . : . : . : . :
JMSF025A14+ ACCTGTTGTTGGTGGGGATAGATGCCGCCATTAGTGTCAGAAACAGAAGCTTCACCGGAG
JMFF043C22+ ACCTGTTGTTGGTGGGGATAGATGCCGCCATTAGTGTCAGAAACAGAAGCTTCACCGGAG
JMFF043E14+ GAG
____________________________________________________________
consensus ACCTGTTGTTGGTGGGGATAGATGCCGCCATTAGTGTCAGAAACAGAAGCTTCACCGGAG
. : . : . : . : . : . :
JMSF025A14+ GCAGTAGAAGTGAGATTAGACATGTTTTCTTGATCCAAAGCTGAATGTGGCTGCTGAATT
JMFF043C22+ GCAGTAGAAGTGAGATTAGACATGTTTTCTTGATCCAAAGCTGAATGTGGCTGCTGAATT
JMFF043E14+ GCAGTAGAAGTGAGATTAGACATGTTTTCTTGATCCAAAGCTGAATGTGGCTGCTGAATT
____________________________________________________________
consensus GCAGTAGAAGTGAGATTAGACATGTTTTCTTGATCCAAAGCTGAATGTGGCTGCTGAATT
. : . : . : . : . : . :
JMSF025A14+ ACCAGACCTTTCATCATCATCTTCCTCCAAAGCTAAAGC
JMFF043C22+ ACCAGACCTTTCATCATCATCTTCCTCCAAAGCTAAAGCCTACCATTATCAGCAAAGCAG
JMFF043E14+ ACCAGACCTTTCATCATCATCTTCCTCCAAAGCTAAAGCCTACCATTATCAGCAAAGCAG
____________________________________________________________
consensus ACCAGACCTTTCATCATCATCTTCCTCCAAAGCTAAAGCCTACCATTATCAGCAAAGCAG
. : . : . : . : . : . :
JMFF043C22+ ATATCTGTCAATTTCTGATAATCTATCACCTAGGAGTCAAAAAGTTGGGATCTTTCCTCC
JMFF043E14+ ATATCTGTCAATTTCTGATAATCTATCACCTAGGAGTCAAAAAGTTGGGATCTTTCCTCC
JMFS121E09+ TAGGAGTCAAAAAGTTGGGATCTTTCCTCC
____________________________________________________________
consensus ATATCTGTCAATTTCTGATAATCTATCACCTAGGAGTCAAAAAGTTGGGATCTTTCCTCC
. : . : . : . : . : . :
JMFF043C22+ CAAAAAAAAAAAAAAAAACCATTAGTTTAAGTAAGATATATACTGAGATCTGAAGACAAA
JMFF043E14+ CAAAAAAAAAAAAAAAAACCATTAGTTTAAGTAAGATATATACTGAGATCTGAAGACAAA
JMFF050B07+ CTGAGATCTGAAGACAAA
JMFS121E09+ CAAAAAAAAAAAAAAAAACCATTAGTTTAAGTAAGATATATACTGAGATCTGAAGACAAA
JMSF022L09+ GACANA
____________________________________________________________
consensus CAAAAAAAAAAAAAAAAACCATTAGTTTAAGTAAGATATATACTGAGATCTGAAGACAAA
. : . : . : . : . : . :
JMFF043C22+ CCCAAACCTAGAAAAAGGTCAAGTAGGTGATGAGAAAATGGACAAAGTGAAAGAGAGAGA
JMFF043E14+ CCCAAACCTAGAAAAAGGTCAAGTAGGTGATGAGAAAATGGACAAAGTGAAAGAGAGAGA
JMFF050B07+ CCCAAACCTAGAAAAAGGTCAAGTAGGTGATGAGAAAATGGACAAAGTGAAAGAGAGAGA
JMFS121E09+ CCCAAACCTAGAAAAAGGTCAAGTAGGTGATGAGAAAATGGACAAAGTGAAAGAGAGAGA
JMSF022L09+ CCCACACCTAGAAAAAGGTCACGTAGGTGATGAGAAAATGGACANAGTGAAAGAGAGAGA
____________________________________________________________
consensus CCCAAACCTAGAAAAAGGTCAAGTAGGTGATGAGAAAATGGACAAAGTGAAAGAGAGAGA
. : . : . : . : . : . :
JMFF043C22+ GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
JMFF043E14+ GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
JMFF050B07+ GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
JMFS121E09+ GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
JMSF022L09+ GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
____________________________________________________________
consensus GAGAGAGTAAAATAAATGGCAGAAATTTCTTGTTTGAACCTCCAAAACACCTCTACAGCC
. : . : . : . : . : . :
JMFF043C22+ TTAGCTCCTTCTCTCCCTTGGCAGCACCCCAACAGACAATTCTTGTTTTTTGCAAAAGCT
JMFF043E14+ TTAGCTCCTTCTCTCCCTTGGCAGCACCCCAACAGACAATTCTTGTTTTTTGCAAAAGCT
JMFF050B07+ TTAGCTCCTTCTCTCCCTTGGCAGCACCCCAACAGACAATTCTTGTTTTTTGCAAAAGCT
JMFS121E09+ TTAGCTCCTTCTCTCCCTTGGCAGCACCCCAACAGACAATTCTTGTTTTTTGCAAAAGCT
JMSF022L09+ TTAGCTCNTTCTCTCCCTTGGCAGCACCCCANCAGACAATTCTTGTTTTTTGCAAAAGCT
____________________________________________________________
consensus TTAGCTCCTTCTCTCCCTTGGCAGCACCCCAACAGACAATTCTTGTTTTTTGCAAAAGCT
. : . : . : . : . : . :
JMFF043C22+ AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCAGAAAGAGAGAGAGAGAGA
JMFF043E14+ AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCAGAAAGAGAGAGAGAGAGA
JMFF050B07+ AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCAGAAAGAGAGAGAGAGAGA
JMFS121E09+ AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCAGAAAGAGAGAGAGAGAGA
JMSF022L09+ AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCNGAAAGAGAGAGAGAGAGA
____________________________________________________________
consensus AAAAGGAGAGAAAGAAAAATGGAGAATTGAAAGTGTTTTTCAGAAAGAGAGAGAGAGAGA
. : . : . : . : . : . :
JMFF043C22+ GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAACCCAGTNGCTCCCCTTCA
JMFF043E14+ GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAACCCCAGTGCTCCCCTTCA
JMFF050B07+ GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAA-CCCAGTGCTCCCCTTCA
JMFS121E09+ GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAA-CCCAGTGCTCCCCTTCA
JMSF022L09+ GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAA-CCCAGTGCTCCCCTTCA
____________________________________________________________
consensus GAGAGAGAGAGATGACCCTCAAACTGAATTAAATCTGGAAAA-CCCAGTGCTCCCCTTCA
. : . : . : . : . : . :
JMFF043C22+ AGAATCATCAAC
JMFF043E14+ AGAATCATCAAC
JMFF050B07+ AGAATCATCAAC
JMFS121E09+ AGAATCATCAACACCCATTCTTGCTAAAATCAAGAAAATCCTATAATAAATCCATGCACA
JMSF022L09+ AGAATCATCAACACCCATTCTTGCTAAAATCAAGAAAATCCTATAATAAATCCATGCACA
____________________________________________________________
consensus AGAATCATCAACACCCATTCTTGCTAAAATCAAGAAAATCCTATAATAAATCCATGCACA
. : . : . : . : . : . :
JMFS121E09+ TAAGAACAAATAAACTGGACCAAGTTTTATAACAAGTAGGGAGAGTGGGAGAGAGAGAGA
JMSF022L09+ TAAGAACAAATAAACTGGACCAAGTTTTATAACAAGTAGGGAGAGTGGGAGAGAGAGAGA
____________________________________________________________
consensus TAAGAACAAATAAACTGGACCAAGTTTTATAACAAGTAGGGAGAGTGGGAGAGAGAGAGA
. : . : . : . : . : . :
JMFS121E09+ GAGAGAAAGAGACAGACATGTGGATGAGAAGTGAAGAGTAATCCTTCTGC
JMSF022L09+ GAGAGAAAGAGACAGACATGTGGATGAGAAGTGAAGAGTAATCCTTCTGCGTATATCTCC
____________________________________________________________
consensus GAGAGAAAGAGACAGACATGTGGATGAGAAGTGAAGAGTAATCCTTCTGCGTATATCTCC