Contig 010692:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+                                                                 TCTCTG
                      ____________________________________________________________
consensus                                                                   TCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           ATCACCATTCTCATATGGTCTCTGTATTAACTTATTCCCCACCATGCCCAATTGCACCAT
JMSF022J02+                                               CCCCACCATGCCCNATTGCACCAT
                      ____________________________________________________________
consensus             ATCACCATTCTCATATGGTCTCTGTATTAACTTATTCCCCACCATGCCCAATTGCACCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           GGCTCAACATGCAAGAAACACAGAAGGCTGTAAAGATCTTGCAAATTATTCTGAAGTGGA
JMSF022J02+           GGCTCAACATGCAAGAAACACAGAAGGCTGTAAAGATCTTGCAAATTATTCTGAAGTGGA
                      ____________________________________________________________
consensus             GGCTCAACATGCAAGAAACACAGAAGGCTGTAAAGATCTTGCAAATTATTCTGAAGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           GTACCAGTGAGACACCACCTGCAATGTGCAGACAATGTAAATGCAGCCTTAGCACTCATA
JMSF022J02+           GTACCAGTGAGACACCACCTGCAATGTGCAGACAATGTAAATGCAGCCTTAGCACTCATA
                      ____________________________________________________________
consensus             GTACCAGTGAGACACCACCTGCAATGTGCAGACAATGTAAATGCAGCCTTAGCACTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           GTTCTCCAGGATTTTATGGTGTGTGCTTCATCCAGTACAATTCGATGCCAATCAACTTCA
JMSF022J02+           GTTCTCCAGGATTTTATGGTGTGTGCTTCATCCAGTACAATTCGATGCCAATCAACTTCA
                      ____________________________________________________________
consensus             GTTCTCCAGGATTTTATGGTGTGTGCTTCATCCAGTACAATTCGATGCCAATCAACTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           TGGAATATGCTACTCTCCACATCAGTTTCCCAGGCCCATAGCATCTGCAAAGATCCCTCT
JMSF022J02+           TGGAATATGCTACTCTCCACATCAGTTTCCCAGGCCCATAGCATCTGCAAAGATCCCTCT
                      ____________________________________________________________
consensus             TGGAATATGCTACTCTCCACATCAGTTTCCCAGGCCCATAGCATCTGCAAAGATCCCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004B04-              TGTTTCCAATGCAGAAGGAAATTCTGCAGTTACTTCACTAGAGAAAATGTTCACCTA
JMFS148F09+           TGCTGTTTCCAATGCAGAAGGAAATTGTGCAGTTGCTTCACCAGAGAAAATGTTCACATA
JMSF022J02+           TGCTGTTTCCAATGCAGAAGGAAATTGTGCAGTTGCTTCACCAGAGAAAATGTTCACATA
                      ____________________________________________________________
consensus             TGCTGTTTCCAATGCAGAAGGAAATTGTGCAGTTGCTTCACCAGAGAAAATGTTCACATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004B04-           AATTGTAAGACCCCTCC                                           
JMFS148F09+           AATTGCAGGACCCCTCCTTTTTGCTCTGCAAGCCTTCCTTGTTGGATAACCAAAAGCATC
JMSF022J02+           AATTGCAGGACCCCTCCTTTTTGCTCTGCAAGCCTTCCTTGTTGGATAACCAAAAGCATC
                      ____________________________________________________________
consensus             AATTGCAGGACCCCTCCTTTTTGCTCTGCAAGCCTTCCTTGTTGGATAACCAAAAGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           AAGTGCAAGCTTCTTAAAAGCTCTTTCAATCACCTTTTCCTCAAAATAGTATCTCGGTGC
JMSF022J02+           AAGTGCAAGCTTCTTAAAAGCTCTTTCAATCACCTTTTCCTCAAAATAGTATCTCGGTGC
                      ____________________________________________________________
consensus             AAGTGCAAGCTTCTTAAAAGCTCTTTCAATCACCTTTTCCTCAAAATAGTATCTCGGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           AAAAACGGAACCCTTGAAATTCCTTCTTTTGATCAATCCTATGAGCACAATCCTGAGATA
JMSF022J02+           AAAAACGGAACCCTTGAAATTCCTTCTTTTGATCAATCCTATGAGCACAATCCTGAGATA
                      ____________________________________________________________
consensus             AAAAACGGAACCCTTGAAATTCCTTCTTTTGATCAATCCTATGAGCACAATCCTGAGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148F09+           GCAAATCAACCTGTGGATTCC                                       
JMSF022J02+           GCAAATCAACCTGTGGATTCCTGCAATGTTGGTGAACACAATACCTCGATGGGGTTGTAA
                      ____________________________________________________________
consensus             GCAAATCAACCTGTGGATTCCTGCAATGTTGGTGAACACAATACCTCGATGGGGTTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF022J02+           TACTTGGCCAAACGAGTCTTTCCTTACCAGTTTTGAAGCACAATGAACCGAATCTGCCGA
                      ____________________________________________________________
consensus             TACTTGGCCAAACGAGTCTTTCCTTACCAGTTTTGAAGCACAATGAACCGAATCTGCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF022J02+           TTTCAAGCCCAAACAAAACCATCAACCAATTTCCCAGAAAAATGAATCGAGAGAACACCC
                      ____________________________________________________________
consensus             TTTCAAGCCCAAACAAAACCATCAACCAATTTCCCAGAAAAATGAATCGAGAGAACACCC