Contig 010691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008J13Sequence531010691 (10)ref|XP_009785805.1|3e-62PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Nicotiana sy647012430 (8)gb|ACH73135.1|6e-353-hydroxy-3-methylglutaryl CoA reductase 2, partial [Solanum lycopersicum] gb|A
JMFF019H09Sequence531010691 (10)ref|XP_009588198.1|4e-61PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Nicotiana to692012430 (8)ref|XP_004170310.1|1e-60PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMFF044H04Sequence637010691 (10)gb|AAV54051.1|5e-733-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]660012430 (8)gb|ACH73135.1|4e-243-hydroxy-3-methylglutaryl CoA reductase 2, partial [Solanum lycopersicum] gb|A
JMFS031E12Sequence574010691 (10)gb|AAV54051.1|3e-943-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]
JMFS035E06Sequence627010691 (10)gb|AAV54051.1|2e-743-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]
JMFS081H10Sequence615010691 (10)gb|AAV54051.1|2e-793-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]
JMSF003G17Sequence408010691 (10)ref|XP_009588198.1|3e-53PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Nicotiana to726012430 (8)ref|XP_004170310.1|2e-72PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMSF022G06Sequence605010691 (10)gb|AAV54051.1|4e-643-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]738012430 (8)ref|XP_004170310.1|7e-63PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMSF044N16Sequence663010691 (10)gb|AAV54051.1|4e-673-hydroxy-3-methylglutaryl coenzyme A reductase [Eucommia ulmoides]521012430 (8)gb|KHN38449.1|5e-133-hydroxy-3-methylglutaryl-coenzyme A reductase [Glycine soja]
JMSF047I14Sequence605010691 (10)ref|XP_006342182.1|4e-57PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Solanum tube783012430 (8)ref|XP_004170310.1|1e-55PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum

Alignment

This contig is upended


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JMFS031E12+                                             GCTTTGCAACCTCTGTTGGCACTCGC
                      ____________________________________________________________
consensus                                               GCTTTGCAACCTCTGTTGGCACTCGC
 
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JMFS031E12+           GACCAAACACCCTTCAGTCGTCGCCATAGGCACAGTGTACTCACATCCGTTGAGCAACAG
                      ____________________________________________________________
consensus             GACCAAACACCCTTCAGTCGTCGCCATAGGCACAGTGTACTCACATCCGTTGAGCAACAG
 
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JMFS031E12+           CGGCCCAGCAACGCCAACAGGGATCTGCACATATCCTACTGGCATTTCACAGCACTGCCC
                      ____________________________________________________________
consensus             CGGCCCAGCAACGCCAACAGGGATCTGCACATATCCTACTGGCATTTCACAGCACTGCCC
 
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JMFS031E12+           CAAAATTGATTCGTAATCCAATCCTTCCAGAGGTAGACCGGAAAGAGACTTCCCCGTCAG
                      ____________________________________________________________
consensus             CAAAATTGATTCGTAATCCAATCCTTCCAGAGGTAGACCGGAAAGAGACTTCCCCGTCAG
 
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JMFS031E12+           TCTCTGCACTGCCTCACGGCGAATGGACGCTGCTTTGTAACAATCACCGAGCCTGGATTC
                      ____________________________________________________________
consensus             TCTCTGCACTGCCTCACGGCGAATGGACGCTGCTTTGTAACAATCACCGAGCCTGGATTC
 
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JMFS031E12+           CAGCGAGTAGATTGAGAATTCACCGGAAACAACCTTTTGTACGACTTGTTCGTCCTCTGC
JMFS081H10+                                            CTTTTGTACGACTTGTTCGTCCTCTGC
JMSF044N16+                                                                  TCTGC
                      ____________________________________________________________
consensus             CAGCGAGTAGATTGAGAATTCACCGGAAACAACCTTTTGTACGACTTGTTCGTCCTCTGC
 
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JMFS031E12+           GGAGGGAAGAGGAATCTGGTGAAGATCCATTACTTTAGAGATGGCAGTGGGAGTGGGAGT
JMFS081H10+           GGAGGGAAGAGGAATCTGGTGAAGATCCATTACTTTAGAGATGGCAGTGGGAGTGGGAGT
JMFS035E06+                                AAGATCCATTACTTTAGAGATGGCAGTGGGAGTGGGAGT
JMFF044H04+                               GAAGATCCATTACTTANGAGATGGCAGTGGGAGTGGGAGT
JMSF047I14+                                                                   GAGT
JMSF044N16+           GGAGGGAAGAGGAATCTGGTGAAGATCCANTACTTTAGAGATGGCACTGGGAGTGGGAGT
JMSF022G06+                                                                  GGAGT
                      ____________________________________________________________
consensus             GGAGGGAAGAGGAATCTGGTGAAGATCCATTACTTTAGAGATGGCAGTGGGAGTGGGAGT
 
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JMFS031E12+           GGGAGTGGGGACGACGCAATCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
JMFS081H10+           GGGAGTGGGGACGACGCAATCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
JMFS035E06+           GGGAGTGGGGACNACGCAATCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
JMFF044H04+           GGGAGTGGGGACGACGCAATCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
JMSF047I14+           GGGAGTGGGGACGACNCANTCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
JMSF044N16+           GGGAGTGGGGACGACGCANTCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCNTC
JMSF022G06+           GGGAGTGGGGACGACGCANTCGAGGGAGGCCTGGCAAGGGCCANGTCGGCGATCCTCNTC
                      ____________________________________________________________
consensus             GGGAGTGGGGACGACGCAATCGAGGGAGGCCTGGCAAGGGCCATGTCGGCGATCCTCGTC
 
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JMFS031E12+           GATAATGAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMFS081H10+           GATAATGAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMFS035E06+           GATAATGAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMFF044H04+           GATAATGAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMSF047I14+           GATAATGAAGCGGGGGTCACTCTCNCCTTCGACATCCCAAGCGTCNTGAGAGGCACGNGC
JMFF008J13+                 GAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMFF019H09+                 GAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
JMSF044N16+           GATAATGAAGCGGGGGTCACTCTCNCCTTNGACATCCCAAGCGTCNTGAGAGGCACGAGC
JMSF022G06+           GATAATGAAGCGGGGGTCACTCTCNCCTTNGACATCCCAAGCGTCNTGAGAGGCACGNGC
                      ____________________________________________________________
consensus             GATAATGAAGCGGGGGTCACTCTCGCCTTCGACATCCCAAGCGTCGTGAGAGGCACGAGC
 
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JMFS031E12+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMSF003G17+             TGAAGGACTGGACAAAGTCANTTCNGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMFS081H10+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMFS035E06+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMFF044H04+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMSF047I14+           AATGAAGGACTGGACAAAGTCAATTCNGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMFF008J13+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMFF019H09+           AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMSF044N16+           ANTGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
JMSF022G06+           ANTGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
                      ____________________________________________________________
consensus             AATGAAGGACTGGACAAAGTCAATTCCGAAGAAGCCGAGGAGATAGATGAAGGAGGCTAT
 
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JMFS031E12+           GAGGGAGA                                                    
JMSF003G17+           GAGGGAGACAATGGCGGCGAGTTCNGAGAAAGTGACGACANGGAGAGGGGTAGAATTGCG
JMFS081H10+           GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACATGGAGAGGGGTAGAATTGCG
JMFS035E06+           GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACATGGAGAGGGGTAGAATTGCG
JMFF044H04+           GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACATGGAGAGGGGTAGAATTGCG
JMSF047I14+           GAGGGAGACANNGGCGGCGAGTTCNGAGAAAGTGACGACANGGAGAGGGGTAGAATTGCG
JMFF008J13+           GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACATGGAGAGGGGTAGAATTGCG
JMFF019H09+           GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACANGGAGAGGGGTAGAATTGCG
JMSF044N16+           GAGGGAGACAATGGCGGCGAGTTCNGAGAAAGTGACGACANGGAGAGGGGTAGAATTGCG
JMSF022G06+           GAGGGAGACAATGGCGGCGAGTTCNGAGAAAGTGACGACANGGAGAGGGGTAGAATTGCG
                      ____________________________________________________________
consensus             GAGGGAGACAATGGCGGCGAGTTCGGAGAAAGTGACGACATGGAGAGGGGTAGAATTGCG
 
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JMSF003G17+           GATCTTGTCGCGCCANCGGTGGAGAAGGTAGTAGGCANCGGAGAAGAAGAGGGTGAAGAA
JMFS081H10+           GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCAACGGAGAAGAAGAGGGTGAAGAA
JMFS035E06+           GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCAACGGAGAAGAAGAGGGTGAAGAA
JMFF044H04+           GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCAACGGAGAAGAAGAGGGTGAAGAA
JMSF047I14+           GATCTTGTCGCGCCANCGGTGGAGAAGGTAGTAGGCANCGGAGAAGAAGAGGGTGAAGAA
JMFF008J13+           GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCANCGGAGAAGAAGAGGGTGAAGAA
JMFF019H09+           GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCANCGGAGAAGAAGAGGGTGAAGAA
JMSF044N16+           GATCTTGTCGCGCCANCGGTGGAGAAGGTANTAGGCANCGGAGAAGAAGAGGGTGAAGAA
JMSF022G06+           GATCTTGTCGCGCCANCGGTGGAGAAGGTANTAGGCANCGGAGAAGAAGAGGGTGAAGAA
                      ____________________________________________________________
consensus             GATCTTGTCGCGCCAGCGGTGGAGAAGGTAGTAGGCAACGGAGAAGAAGAGGGTGAAGAA
 
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JMSF003G17+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
JMFS081H10+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
JMFS035E06+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
JMFF044H04+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
JMSF047I14+           AATGCCNTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
JMFF008J13+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCNTAGGGGTAGGTGA
JMFF019H09+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCNTAGGGGTAGGTGA
JMSF044N16+           AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCNGAGGCCTTAGGGGTAGGTGA
JMSF022G06+           AATGCCNTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCNGAGGCCTTAGGGGTAGGTGA
                      ____________________________________________________________
consensus             AATGCCGTTAGTCAAGTAGAGAGGGAGCGGGAGAGCATCAGAGGCCTTAGGGGTAGGTGA
 
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JMSF003G17+           CGGAGACCGATCNACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMFS081H10+           CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMFS035E06+           CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMFF044H04+           CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMSF047I14+           CGGAGACCGATCNACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMFF008J13+           CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMFF019H09+           CGGAGACCGATCGACGGCGGCCGAAGCCNTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMSF044N16+           CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
JMSF022G06+           CGGAGACCGATCGACGGCGNCCGAAGCCTTCCNCTGAAGGTGGTGGTGGGGGTGGTCGAC
                      ____________________________________________________________
consensus             CGGAGACCGATCGACGGCGGCCGAAGCCTTCCGCTGAAGGTGGTGGTGGGGGTGGTCGAC
 
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JMSF003G17+           GNCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCGNCANGGAGGGGAC
JMFS081H10+           GGCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCGGCAGGGAGGGGAC
JMFS035E06+           GGCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCGGCAGGGAGGGGAC
JMFF044H04+           GGCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCGGCAGGGAGGGGAC
JMSF047I14+           GNCGGGTTTNTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCNGCANGGAGGGGAC
JMFF008J13+           GGCGGGTTTNTGAGGTCTACGGCGGATGTCCANGAGGGAATATTCCGGCAGGGAGGGGAC
JMFF019H09+           GGCGGGTTTNTGAGGTCTACGGCGGATGTCCANGAGGGAATATTCCGGCAGGGAGGGGAC
JMSF044N16+           GGCGGGTTTNTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCNGCANGGAGGGGAC
JMSF022G06+           GNCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCNNCANGGAGGGGAC
                      ____________________________________________________________
consensus             GGCGGGTTTCTGAGGTCTACGGCGGATGTCCATGAGGGAATATTCCGGCAGGGAGGGGAC
 
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JMSF003G17+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGC              
JMFS081H10+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGA            
JMFS035E06+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMFF044H04+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMSF047I14+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMFF008J13+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMFF019H09+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMSF044N16+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
JMSF022G06+           AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
                      ____________________________________________________________
consensus             AAAGTATATAGACCGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGGCCTTCGCT
 
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JMFS035E06+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAA            
JMFF044H04+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGAT       
JMSF047I14+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGATGGGC   
JMFF008J13+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGAT       
JMFF019H09+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGATGGGC   
JMSF044N16+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGATGGGC   
JMSF022G06+           CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGATGGGCGGC
                      ____________________________________________________________
consensus             CCGTACTCCCTTTTGTTAAAAAAAATAAATGTTTGATTCGGAAGGGAATGGATGGGCGGC