Contig 010690:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF003B16-                                                  ATTATATTAATATAAGAAAT
                      ____________________________________________________________
consensus                                                     ATTATATTAATATAAGAAAT
 
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rJMFF003B16-          GGATCCCACTTAAAAGATTCAACATGCGAATAAGCTGAACTGCATCCTAAAAACATGTTT
rJMSF022F18-                                                             AACATGTTT
                      ____________________________________________________________
consensus             GGATCCCACTTAAAAGATTCAACATGCGAATAAGCTGAACTGCATCCTAAAAACATGTTT
 
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rJMFF003B16-          AAACTTGAAAGTCTTGGTTGTTGTAGTACCAATTGTTGTCACCAATAAACTAATCAAAAA
rJMSF022F18-          AAACTTGAAAGTCTTGGTTGTTGTAGTACCAATTGTTGTCACCAATAAACTAATCAAAAA
JMSF022F18+                                 GTAGTACCAATTGTTGTCACCAATAAACTAATCAAAAA
                      ____________________________________________________________
consensus             AAACTTGAAAGTCTTGGTTGTTGTAGTACCAATTGTTGTCACCAATAAACTAATCAAAAA
 
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rJMFF003B16-          TTAAATGAACTGAAAATTCAATTTCACACGTGAACAATCCTACTCAATAAAACAAATCCA
rJMSF022F18-          TTAAATGAACTGAAAATTCAATTTCACACGTGAACAATCCTACTCAATAAAACAAATCCA
JMFF003B16+                                                 CCTACTCAATAAAACAAATCCA
JMSF022F18+           TTAAATGAACTGAAAATTCAATTTCACACGTGAACAATCCTACTCAATAAAACAAATCCA
                      ____________________________________________________________
consensus             TTAAATGAACTGAAAATTCAATTTCACACGTGAACAATCCTACTCAATAAAACAAATCCA
 
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rJMFF003B16-          GGGCAAGCACAGCAAGATACTAATGGTATTTAGGCTACAATTCCATAGCATATTTGGATG
rJMSF022F18-          GGGCAAGCACAGCAAGATACTAATGGTATTTAGGCTACAATTCCATAGCATATTTGGATG
JMFF003B16+           GGGCAAGCACAGCAAGATACTAATGGTATTTAGGCTACAATTCCATAGCATATTTGGATG
JMSF022F18+           GGGCAAGCACAGCAAGATACTAATGGTATTTAGGCTACAATTCCATAGCATATTTGGATG
                      ____________________________________________________________
consensus             GGGCAAGCACAGCAAGATACTAATGGTATTTAGGCTACAATTCCATAGCATATTTGGATG
 
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rJMFF003B16-          GATGGCAAAATTACCATACTATGGCTGTATGAGTATGGCATTTTGTTAATCCTCCTCCAG
rJMSF022F18-          GATGGCAAAATTACCATACTATGGCTGTATGAGTATGGCATTTTGTTAATCCTCCTCCAG
JMFF003B16+           GATGGCAAAATTACCATACTATGGCTGTATGAGTATGGCATTTTGTTAATCCTCCTCCAG
JMSF022F18+           GATGGCAAAATTACCATACTATGGCTGTATGAGTATGGCATTTTGTTAATCCTCCTCCAG
                      ____________________________________________________________
consensus             GATGGCAAAATTACCATACTATGGCTGTATGAGTATGGCATTTTGTTAATCCTCCTCCAG
 
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rJMFF003B16-          ATTGATGGAGTCTTTGAATTTTGCATACAACGCCTTTTTCAGCTCCGCCATCTGGGCAAC
rJMSF022F18-          ATTGATGGAGTCTTTGAATTTTGCATACAACGCCTTTTTCAGCTCCGCCATCTGGGCAAC
JMFF003B16+           ATTGATGGAGTCTTTGAATTTTGCATACAACGCCTTTTTCAGCTCCGCCATCTGGGCAAC
JMSF022F18+           ATTGATGGAGTCTTTGAATTTTGCATACAACGCCTTTTTCAGCTCCGCCATCTGGGCAAC
                      ____________________________________________________________
consensus             ATTGATGGAGTCTTTGAATTTTGCATACAACGCCTTTTTCAGCTCCGCCATCTGGGCAAC
 
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rJMFF003B16-          CACGCTTTCCTTCTCTTCCTCTAGTTTCTCCAGCTTCTTGCTAGTAACCTCTTTCATTTC
rJMSF022F18-          CACGCTTTCCTTCTCTTCCTCTAGTTTCTCCAGCTTCTTGCTAGTAACCTCTTTCATTTC
JMFF003B16+           CACGCTTTCCTTCTCTTCCTCTAGTTTCTCCAGCTTCTTGCTAGTAACCTCTTTCATTTC
JMSF022F18+           CACGCTTTCCTTCTCTTCCTCTAGTTTCTCCAGCTTCTTGCTAGTAACCTCTTTCATTTC
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consensus             CACGCTTTCCTTCTCTTCCTCTAGTTTCTCCAGCTTCTTGCTAGTAACCTCTTTCATTTC
 
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rJMFF003B16-          CTCTATCCTGCTCTCCACTTCTTCCTTTGCCACATGTGCAAAAACCTCTGCTATCTGGAA
rJMSF022F18-          CTCTATCCTGCTCTCCACTTCTTCCTTTGCCACATGTGCAAAAACCTCTCCTATCTGGAA
JMFF003B16+           CTCTATCCTGCTCTCCACTTCTTCCTTTGCCACATGTGCAAAAACCTCTGCTATCTGGAA
JMSF022F18+           CTCTATCCTGCTCTCCACTTCTTCCTTTGCCACATGTGCAAAAACCTCTCCTATCTGGAA
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consensus             CTCTATCCTGCTCTCCACTTCTTCCTTTGCCACATGTGCAAAAACCTCTGCTATCTGGAA
 
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rJMFF003B16-          CCGCACTACCTCCTCGTCCGTGAGAATTAACTCGTTGCTTGCATCTTCCATATTTTCACA
rJMSF022F18-          CCGCACTACCTCCTCGTCCGTGAGAATTAACTCGTTGCTTGCATCTTCCATATTTTCACA
JMFF003B16+           CCGCACTACCTCCTCGTCCGTGAGAATTAACTCGTTGCTTGCATCTTCCATATTTTCACA
JMSF022F18+           CCGCACTACCTCCTCGTCCGTGAGAATTAACTCGTTGCTTGCATCTTCCATATTTTCACA
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consensus             CCGCACTACCTCCTCGTCCGTGAGAATTAACTCGTTGCTTGCATCTTCCATATTTTCACA
 
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rJMFF003B16-          TGTTTCCTTAGCGACCTTGATTTCATCTTCGAGTTCATGGAAGCGAGTGTTAAGTCGGCT
rJMSF022F18-          TGTTTCCTTAGCGACCTTGATTTCATCTTCGAGTTCATGGAAGCGAGTGTTAAGTCGGCT
JMFF003B16+           TGTTTCCTTAGCGACCTTGATTTCATCTTCGAGTTCATGGAAGCGAGTGTTAAGTCGGCT
JMSF022F18+           TGTTTCCTTAGCGACCTTGATTTCATCTTCGAGTTCATGGAAGCGAGTGTTAAGTCGGCT
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consensus             TGTTTCCTTAGCGACCTTGATTTCATCTTCGAGTTCATGGAAGCGAGTGTTAAGTCGGCT
 
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rJMFF003B16-          GAATTTGTTGATTTTCTGTTGATCCTCCCAGGTCACTTCCACTTCCGAACTCGAAGCTCC
rJMSF022F18-          GAATTTGTTGATTTTCTGTTGATCCTCCCAGGTCACTTCCACTTCCGAACTCGAAGCTCC
JMFF003B16+           GAATTTGTTGATTTTCTGTTGATCCTCCCAGGTCACTTCCACTTCCGAACTCGAAGCTCC
JMSF022F18+           GAATTTGTTGATTTTCTGTTGATCCTCCCAGGTCACTTCCACTTCCGAACTCGAAGCTCC
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consensus             GAATTTGTTGATTTTCTGTTGATCCTCCCAGGTCACTTCCACTTCCGAACTCGAAGCTCC
 
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rJMFF003B16-          GACCTGCTGCATGTTTAACTTGGACCGATTGAAG                          
rJMSF022F18-          GACCTGCTGCATGTTTAACTTGGACCGATTGAAGATGGTAAGATCGTCTTCGTAGGTTTT
JMFF003B16+           GACCTGCTGCATGTTTAACTTGGACCGATTGAAGATGGTAAGATCGTCTTCGTAGGTTTT
JMSF022F18+           GACCTGCTGCATGTTTAACTTGGACCGATTGAAGATGGTAAGATCGTCTTCGTAGGTTTT
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consensus             GACCTGCTGCATGTTTAACTTGGACCGATTGAAGATGGTAAGATCGTCTTCGTAGGTTTT
 
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rJMSF022F18-          GTGGAAACCAGAAGAAAGATGTGATTCGAACAAGACT                       
JMFF003B16+           GTGGAAACCAGAAGAAAGATGTGATTCGAACAAGACT                       
JMSF022F18+           GTGGAAACCAGAAGAAAGATGTGATTCGAACAAGACTGATGAGAGTCGGAGAGGGTTGCC
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consensus             GTGGAAACCAGAAGAAAGATGTGATTCGAACAAGACTGATGAGAGTCGGAGAGGGTTGCC