Contig 010689:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022E21+                   GGATGCACCTGTTCAAACGGAGTTCTGCTCTCGGATAACAGTGATCGCCTA
JMSF022E21-                    GGATGCACCTGTTCAAACGGAGTTCTGCTCTCGGATAACAGTGATCGCCTA
                      ____________________________________________________________
consensus                      GGATGCACCTGTTCAAACGGAGTTCTGCTCTCGGATAACAGTGATCGCCTA
 
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rJMSF022E21+          AAGCAACCGGTTGCCGGAAACAAGTAAGTAGCTCGCTTCGCTGGGTGTTGCCAACGTTGA
JMSF022E21-           AAGCAACCGGTTGCCGGAAACAAGTAAGTAGCTCGCTTCGCTGGGTGTTGCCAACGTTGA
                      ____________________________________________________________
consensus             AAGCAACCGGTTGCCGGAAACAAGTAAGTAGCTCGCTTCGCTGGGTGTTGCCAACGTTGA
 
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rJMSF022E21+          GCGGAGATGGGGTTTATGGTGACAACTCTTGTTTTTGTTGCTGTTGGGATCATTGTATCT
JMSF022E21-           GCGGAGATGGGGTTTATGGTGACAACTCTTGTTTTTGTTGCTGTTGGGATCATTGTATCT
                      ____________________________________________________________
consensus             GCGGAGATGGGGTTTATGGTGACAACTCTTGTTTTTGTTGCTGTTGGGATCATTGTATCT
 
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rJMSF022E21+          CTTTGTGCTACAATCTGCTGCAACAGAGGGCCCTCCACTAATCTGTTACACCTCACACTG
JMSF022E21-           CTTTGTGCTACAATCTGCTGCAACAGAGGGCCCTCCACTAATCTGTTACACCTCACACTG
                      ____________________________________________________________
consensus             CTTTGTGCTACAATCTGCTGCAACAGAGGGCCCTCCACTAATCTGTTACACCTCACACTG
 
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rJMSF022E21+          ATAATCACCGCAACAGTTTGCTGTTGGATGATGTGGGCGATTGTGTATCTTGCTCAGATG
JMSF022E21-           ATAATCACCGCAACAGTTTGCTGTTGGATGATGTGGGCGATTGTGTATCTTGCTCAGATG
                      ____________________________________________________________
consensus             ATAATCACCGCAACAGTTTGCTGTTGGATGATGTGGGCGATTGTGTATCTTGCTCAGATG
 
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rJMSF022E21+          AACCCACTCATTGTTCCTATTTTAAGCGAAGGGGAGTGATGGAACTATGCAGGGACGTTT
JMSF022E21-           AACCCACTCATTGTTCCTATTTTAAGCGAAGGGGAGTGATGGAACTATGCAGGGACGTTT
                      ____________________________________________________________
consensus             AACCCACTCATTGTTCCTATTTTAAGCGAAGGGGAGTGATGGAACTATGCAGGGACGTTT
 
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rJMSF022E21+          TGCGCTGTGGATTGGAAGATTGAAAGCCAGAAAAGAAAAAATTCGAGGGCATAAATCTAC
JMSF022E21-           TGCGCTGTGGATTGGAAGATTGAAAGCCAGAAAAGAAAAAATTCGAGGGCATAAATCTAC
                      ____________________________________________________________
consensus             TGCGCTGTGGATTGGAAGATTGAAAGCCAGAAAAGAAAAAATTCGAGGGCATAAATCTAC
 
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rJMSF022E21+          TTTAATCCTTCTAGCGTTAGACTATGTAATTGTCAGTGGTGCAGAACCATTTGCTTCATT
JMSF022E21-           TTTAATCCTTCTAGCGTTAGACTATGTAATTGTCAGTGGTGCAGAACCATTTGCTTCATT
                      ____________________________________________________________
consensus             TTTAATCCTTCTAGCGTTAGACTATGTAATTGTCAGTGGTGCAGAACCATTTGCTTCATT
 
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rJMSF022E21+          TGTATATCATTTGTTGTCACAAATTACATTCTATTTATTAGAGCAATAATTAACTTGTCC
JMSF022E21-           TGTATATCATTTGTTGTCACAAATTACATTCTATTTATTAGAGCAATAATTAACTTGTCC
                      ____________________________________________________________
consensus             TGTATATCATTTGTTGTCACAAATTACATTCTATTTATTAGAGCAATAATTAACTTGTCC
 
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rJMSF022E21+          TCCATTTTTGTACTGTGTAAACATTGTACCTAGGAGGAAATAACTGCTGGAAGACTTTGC
JMSF022E21-           TCCATTTTTGTACTGTGTAAACATTGTACCTAGGAGGAAATAACTGCTGGAAGACTTTGC
                      ____________________________________________________________
consensus             TCCATTTTTGTACTGTGTAAACATTGTACCTAGGAGGAAATAACTGCTGGAAGACTTTGC
 
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rJMSF022E21+          TGCTT                                                       
JMSF022E21-           TGCTTTTTTTCATGTATCCCTACTTTTGGCAGAAATAAATTATGGAATGCTTGTGCAAAA
                      ____________________________________________________________
consensus             TGCTTTTTTTCATGTATCCCTACTTTTGGCAGAAATAAATTATGGAATGCTTGTGCAAAA