Contig 010687:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G21Sequence553010687 (5)ref|XP_002285123.1|2e-17PREDICTED: yrdC domain-containing protein, mitochondrial isoform X1 [Vitis vini717004394 (7)ref|XP_009798167.1|1e-104PREDICTED: yrdC domain-containing protein, mitochondrial isoform X3 [Nicotiana
JMSF008F11Sequence350010687 (5)752004394 (7)ref|XP_009798167.1|2e-112PREDICTED: yrdC domain-containing protein, mitochondrial isoform X3 [Nicotiana
JMSF021K18Sequence658010687 (5)ref|XP_009592140.1|1e-33PREDICTED: yrdC domain-containing protein, mitochondrial [Nicotiana tomentosifo748004394 (7)ref|XP_009798167.1|2e-122PREDICTED: yrdC domain-containing protein, mitochondrial isoform X3 [Nicotiana
JMSF022D14Sequence611010687 (5)ref|XP_009592140.1|3e-23PREDICTED: yrdC domain-containing protein, mitochondrial [Nicotiana tomentosifo771004394 (7)ref|XP_009798167.1|7e-125PREDICTED: yrdC domain-containing protein, mitochondrial isoform X3 [Nicotiana
JMSF023D14Sequence634010687 (5)ref|XP_009592140.1|1e-27PREDICTED: yrdC domain-containing protein, mitochondrial [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023D14+ AGGGGATTTGTATATTTACGACCTTTGATATCAT
JMSF021K18+ TCAACATCACCAACACAAATTGCCAGGGGATTTGTATATTTACGACCTTTGATATCAT
JMSF022D14+ TTTGATATCAT
                      ____________________________________________________________
consensus TCAACATCACCAACACAAATTGCCAGGGGATTTGTATATTTACGACCTTTGATATCAT
 
. : . : . : . : . : . :
JMSF023D14+ ATATACGGTTAACGGCCTCAGCAGAACAAGCGTCACAAGCAAAGCCATAGAGCGTGTCGG
JMSF021K18+ ATATACGGTTAACGGCCTCAGCAGAACAAGCGTCACAAGCAAAGCCATAGAGCGTGTCGG
JMFF009G21+ CCTCAGCAGAACAAGCGTCACAAGCAAAGCCATAGAGCGTGTCGG
JMSF022D14+ ATATACGGTTAACGGCCTCAGCAGAACAAGCGTCACAAGCAAAGCCATAGAGCGTGTCGG
                      ____________________________________________________________
consensus ATATACGGTTAACGGCCTCAGCAGAACAAGCGTCACAAGCAAAGCCATAGAGCGTGTCGG
 
. : . : . : . : . : . :
JMSF023D14+ TGGGGACAGCAATAACATTCCCAGACTTGATAGCTTCAATTGCAGCTTCAGCATAATCCT
JMSF021K18+ TGGGGACAGCAATAACATTCCCAGACTTGATAGCTTCAATTGCAGCTTCAGCATAATCCT
JMFF009G21+ TGGGGACAGCAATAACATTCCCAGACTTGATAGCTTCAATTGCAGCTTCAGCATAATCCT
JMSF022D14+ TGGGGACAGCAATAACATTCCCAGACTTGATAGCTTCAATTGCAGCTTCAGCATAATCCT
                      ____________________________________________________________
consensus TGGGGACAGCAATAACATTCCCAGACTTGATAGCTTCAATTGCAGCTTCAGCATAATCCT
 
. : . : . : . : . : . :
JMSF023D14+ CTGTTGCTGGTTGCACCATTCCCATCCTATTAGTCTCCACTCTCAAATCCATCTTGGTTT
JMSF021K18+ CTGTTGCTGGTTGCACCATTCCCATCCTATTAGTCTCCACTCTCAAATCCATCTTGGTTT
JMFF009G21+ CTGTTGCTGGTTGCACCATTCCCATCCTATTAGTCTCCACTCTCAAATCCATCTTGGTTT
JMSF022D14+ CTGTTGCTGGTTGCACCATTCCCATCCTATTAGTCTCCACTCTCAAATCCATCTTGGTTT
                      ____________________________________________________________
consensus CTGTTGCTGGTTGCACCATTCCCATCCTATTAGTCTCCACTCTCAAATCCATCTTGGTTT
 
. : . : . : . : . : . :
JMSF023D14+ TCACACTAACCCCAACCAAGCTCCTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
JMSF021K18+ TCACACTAACCCCAACCAAGCTCCTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
JMFF009G21+ TCACACTAACCCCAACCAAGCTCCTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
JMSF008F11+ TCACACTAACCCCAACCAAGCTCNTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
JMSF022D14+ TCACACTAACCCCAACCAAGCTCCTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
                      ____________________________________________________________
consensus TCACACTAACCCCAACCAAGCTCCTCCTCTTGCGCTGCCCCAATTTCACAAACCCAAACT
 
. : . : . : . : . : . :
JMSF023D14+ TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
JMSF021K18+ TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
JMFF009G21+ TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
JMSF008F11+ TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
JMSF022D14+ TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
                      ____________________________________________________________
consensus TCCCAATCACCCCTGGGGAAGGGAGGATGAAGGGGCTGAAGAGGGGCAGCCACTGGGCAA
 
. : . : . : . : . : . :
JMSF023D14+ TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTNTGCTTTCTTCACAGTAGCCAGT
JMSF021K18+ TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTCTGCTTTCTTCACAGTAGCCAGT
JMFF009G21+ TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTCTGCTTTCTTC
JMSF008F11+ TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTCTGCTTTCTTC
JMSF022D14+ TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTCTGCTTTCTTCACAGTAGCCAGT
                      ____________________________________________________________
consensus TTCTTATGTTTTTAGGGGTGATGTACATCAGCAAACTCTGCTTTCTTCACAGTAGCCAGT
 
. : . : . : . : . : . :
JMSF023D14+ AGCGAGAGAGGCCGGAGCTGGCCGCGCGCGGGGAGCAGGTCGCCGTCGGAGACTTGGAGT
JMSF021K18+ AGCGAGAGAGGCCGGAGCTGGCCGCGCGCGGGGAGCAGGTCGCCGTCGGAGACTTGGAGT
JMSF022D14+ AGCGAGAGAGGCCGGAGCTGGCCGCGCGCGGGGAGCAGGTCGCCGTCGGAGACTTGGAGT
                      ____________________________________________________________
consensus AGCGAGAGAGGCCGGAGCTGGCCGCGCGCGGGGAGCAGGTCGCCGTCGGAGACTTGGAGT
 
. : . : . : . : . : . :
JMSF023D14+ TCGCAGTCGCAGCAGACCGGGAGAATTGGAGAAGGCCAAACCAAACTGGAGAACTGGAGT
JMSF021K18+ TCGCAGTCGCAGCAGACCGGGAGAATTGGAGAAGGCCAAACCAAACTGGAGAACTGGAGT
JMSF022D14+ TCGCAGTCGCAGCAGACCGGGAGAATTGGAGAAGGCCAAACCAAACTGGAGAACTGGAGT
                      ____________________________________________________________
consensus TCGCAGTCGCAGCAGACCGGGAGAATTGGAGAAGGCCAAACCAAACTGGAGAACTGGAGT
 
. : . : . : . : . : . :
JMSF023D14+ TCGCAGTCGCTGGTNGGAGCCTCGGAGGTCGCCGGTCTTCCGTCTTCGNTTCGTGCCTTC
JMSF021K18+ TCGCAGTCGCTGGTCGGAGCCTCGGAGGTCGCCGGTCTTCCGTCTTCGCTTCGTGCCTTC
JMSF022D14+ TCGCAGTCGCTGGTCGGAGCCTCGGAGGTCGCCGGTCTTCCGTCTTCGCTTCGTGCCTTC
                      ____________________________________________________________
consensus TCGCAGTCGCTGGTCGGAGCCTCGGAGGTCGCCGGTCTTCCGTCTTCGCTTCGTGCCTTC
 
. : . : . : . : . : . :
JMSF023D14+ GGCCTTCGCGTTCGCACTTCGCTGAGAGTAGTCGAGAAGAGAGCCAGACAGTGAGAGA
JMSF021K18+ GGCCTTCGCGTTCGCACTTCGCTGAGAGTAGTCGAGAAGAGAGCCAGACAGTGAGAGA
JMSF022D14+ GGCCTTCGCGTTCGCACTTCGCTGAGAGTAGTCGAGAAGAGAGCCAGACAGTGAGAGACC
                      ____________________________________________________________
consensus GGCCTTCGCGTTCGCACTTCGCTGAGAGTAGTCGAGAAGAGAGCCAGACAGTGAGAGACC