Contig 010686:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003P08Sequence108010686 (8)744009604 (2)ref|XP_009625232.1|9e-44PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Nicotiana tome
JMFF019P12Sequence320007356 (2)742010686 (8)ref|XP_007011597.1|7e-71RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921
JMFN040F17Sequence539010686 (8)ref|XP_002280551.1|5e-11PREDICTED: E3 ubiquitin-protein ligase RLIM [Vitis vinifera] ref|XP_010648413.1|
JMFN043H18Sequence291010686 (8)ref|XP_011076797.1|1e-29PREDICTED: uncharacterized RING finger protein C4G3.12c-like [Sesamum indicum]
JMFS126D02Sequence516010686 (8)
JMSF019I10Sequence573024159ref|XP_009769247.1|96.3PREDICTED: uncharacterized protein LOC104220129 [Nicotiana sylvestris]757010686 (8)ref|XP_007011597.1|6e-71RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921
JMSF022B18Sequence601010686 (8)ref|XP_009607722.1|8e-26PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Nicotiana762009604 (2)ref|XP_009625232.1|7e-66PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Nicotiana tome
JMSF031J24Sequence667016819ref|XP_006355186.1|6e-08PREDICTED: uncharacterized protein DDB_G0271670-like isoform X3 [Solanum tubero762010686 (8)ref|XP_007011597.1|4e-76RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031J24+ CCGTGATGCCNTGNGGAGATATAACATGGATGAA
                      ____________________________________________________________
consensus CCGTGATGCCNTGNGGAGATATAACATGGATGAA
 
. : . : . : . : . : . :
rJMSF031J24+ ATTGCTGGGGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
rJMFF019P12+ GGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
rJMSF019I10+ GGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
                      ____________________________________________________________
consensus ATTGCTGGGGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
 
. : . : . : . : . : . :
rJMSF031J24+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
JMFN043H18- CACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCCACAT
rJMFF019P12+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
rJMSF019I10+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
                      ____________________________________________________________
consensus CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
 
. : . : . : . : . : . :
rJMSF031J24+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
JMFN043H18- AGAGACGTGAGATTGGACATCGATAACCTGTCCTACGAGGAATTACTAGCTCTCGGGGAG
rJMFF019P12+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
rJMSF019I10+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
                      ____________________________________________________________
consensus AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
 
. : . : . : . : . : . :
rJMSF031J24+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGGCGAAGCAATGTCAAAGTGCCTTAGGAGA
JMFN043H18- AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTATGAGA
rJMFF019P12+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
rJMSF019I10+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
                      ____________________________________________________________
consensus AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
 
. : . : . : . : . : . :
rJMSF031J24+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
JMFN043H18- AGCGTCTATCGGGTTACCTCTTCGGGAGTACGTGTTGCTGGATTGAAAGGGGGTGAAGAT
rJMFF019P12+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
rJMSF019I10+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
                      ____________________________________________________________
consensus AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
 
. : . : . : . : . : . :
rJMSF031J24+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
JMFN043H18- GACAACAAATTCACCATTTGCCCGGAGGAG
rJMFF019P12+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
rJMSF019I10+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
JMFN040F17- GGATGTTG
                      ____________________________________________________________
consensus GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
 
. : . : . : . : . : . :
rJMSF031J24+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
rJMFF019P12+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
rJMSF019I10+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
JMFN040F17- GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
JMFS126D02+ ATGAAGAATTGG
                      ____________________________________________________________
consensus GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
 
. : . : . : . : . : . :
rJMSF031J24+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
rJMFF019P12+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
rJMSF019I10+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
JMFN040F17- TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
JMFS126D02+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
                      ____________________________________________________________
consensus TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
 
. : . : . : . : . : . :
rJMSF031J24+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
rJMFF019P12+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
rJMSF019I10+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
JMFN040F17- TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
JMFS126D02+ TCAAGCAACCTCGATCAGTGCCTACCACGATTTTGAGGGAATGGATTTGGTTTCCTCTTG
                      ____________________________________________________________
consensus TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
 
. : . : . : . : . : . :
rJMSF031J24+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
rJMFF019P12+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
rJMSF019I10+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
JMFN040F17- TACAGATCCCCTTCTGTTTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
JMFS126D02+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
                      ____________________________________________________________
consensus TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
 
. : . : . : . : . : . :
rJMSF031J24+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
rJMFF019P12+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
rJMSF019I10+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
JMFN040F17- TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
JMFS126D02+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
                      ____________________________________________________________
consensus TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
 
. : . : . : . : . : . :
rJMSF031J24+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAA
rJMFF019P12+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTC
rJMSF019I10+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACGTTTCAATGTACAG
JMFN040F17- GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTACAG
JMFS126D02+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTCCAG
                      ____________________________________________________________
consensus GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTACAG
 
. : . : . : . : . : . :
rJMSF019I10+ AGAG
JMFN040F17- AGAG
JMFS126D02+ AGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus AGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFS126D02+ XXGAATTCGGCACGAGGCTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
JMFF003P08- GTGACTCGTGAGCCGACC
JMSF022B18- CTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
                      ____________________________________________________________
consensus NNGAATTCGGCACGAGGCTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
 
. : . : . : . : . : . :
JMFS126D02+ CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
JMFF003P08- CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
JMSF022B18- CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
                      ____________________________________________________________
consensus CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
 
. : . : . : . : . : . :
JMFS126D02+ GCTCTCACTTGTCGTCACTTTTCAC
JMFF003P08- GCTCTCACTTGTCGTCACTTTTCAC
JMSF022B18- GCTCTCACTTGTCGTCACTTTTCACATTTCAGCATCTCCCCCAATCTCACGTGCGCTCAG
                      ____________________________________________________________
consensus GCTCTCACTTGTCGTCACTTTTCACATTTCAGCATCTCCCCCAATCTCACGTGCGCTCAG
 
. : . : . : . : . : . :
JMSF022B18- TCCCGATTTCCTCCTCCATTTCGAAGAGCTGCTGGTGATAGAGCTGCTGGCGATGATTGG
                      ____________________________________________________________
consensus TCCCGATTTCCTCCTCCATTTCGAAGAGCTGCTGGTGATAGAGCTGCTGGCGATGATTGG
 
. : . : . : . : . : . :
JMSF022B18- CGACGAGCAATTTCAGATGGCAAACAATGCAAAGGCACTTGTTGTTCACGATACATCAAT
                      ____________________________________________________________
consensus CGACGAGCAATTTCAGATGGCAAACAATGCAAAGGCACTTGTTGTTCACGATACATCAAT
 
. : . : . : . : . : . :
JMSF022B18- GTTGAACCATGTGGGTCAGAACAATTCCTCTGCATTTGCAAACCAGGGAATGCAAAATGG
                      ____________________________________________________________
consensus GTTGAACCATGTGGGTCAGAACAATTCCTCTGCATTTGCAAACCAGGGAATGCAAAATGG
 
. : . : . : . : . : . :
JMSF022B18- AATTTTAGACTCACCTGCTTACAAAGCGAAGATATGTCAGGATGCTTTACAGGAGACTGG
                      ____________________________________________________________
consensus AATTTTAGACTCACCTGCTTACAAAGCGAAGATATGTCAGGATGCTTTACAGGAGACTGG
 
. : . : . : . : . : . :
JMSF022B18- TCTGAGAGTCAAACAACATGAAGAAAATATGAAATTCTTAAAGACAAAGAAGAACAGATT
                      ____________________________________________________________
consensus TCTGAGAGTCAAACAACATGAAGAAAATATGAAATTCTTAAAGACAAAGAAGAACAGATT
 
. : . : . : . : . : . :
JMSF022B18- GGATGATTCAATTATAGATCTGCAAGTTGCACTTGGCAAACATCACTCAGCAGCTGCACC
                      ____________________________________________________________
consensus GGATGATTCAATTATAGATCTGCAAGTTGCACTTGGCAAACATCACTCAGCAGCTGCACC
 
. : . : . : . : . : . :
JMSF022B18- TAAAATTGAAAATGATCAAGATGCTCGGAGTGAGGAGGAGACAGTTAAACAGATTATGAG
                      ____________________________________________________________
consensus TAAAATTGAAAATGATCAAGATGCTCGGAGTGAGGAGGAGACAGTTAAACAGATTATGAG