| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003P08 | Sequence | 108 | 010686 (8) | 744 | 009604 (2) | ref|XP_009625232.1| | 9e-44 | PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Nicotiana tome | |||
| JMFF019P12 | Sequence | 320 | 007356 (2) | 742 | 010686 (8) | ref|XP_007011597.1| | 7e-71 | RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921 | |||
| JMFN040F17 | Sequence | 539 | 010686 (8) | ref|XP_002280551.1| | 5e-11 | PREDICTED: E3 ubiquitin-protein ligase RLIM [Vitis vinifera] ref|XP_010648413.1| | |||||
| JMFN043H18 | Sequence | 291 | 010686 (8) | ref|XP_011076797.1| | 1e-29 | PREDICTED: uncharacterized RING finger protein C4G3.12c-like [Sesamum indicum] | |||||
| JMFS126D02 | Sequence | 516 | 010686 (8) | ||||||||
| JMSF019I10 | Sequence | 573 | 024159 | ref|XP_009769247.1| | 96.3 | PREDICTED: uncharacterized protein LOC104220129 [Nicotiana sylvestris] | 757 | 010686 (8) | ref|XP_007011597.1| | 6e-71 | RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921 |
| JMSF022B18 | Sequence | 601 | 010686 (8) | ref|XP_009607722.1| | 8e-26 | PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Nicotiana | 762 | 009604 (2) | ref|XP_009625232.1| | 7e-66 | PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Nicotiana tome |
| JMSF031J24 | Sequence | 667 | 016819 | ref|XP_006355186.1| | 6e-08 | PREDICTED: uncharacterized protein DDB_G0271670-like isoform X3 [Solanum tubero | 762 | 010686 (8) | ref|XP_007011597.1| | 4e-76 | RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao] gb|EOY2921 |
This contig is upended
. : . : . : . : . : . :
rJMSF031J24+ CCGTGATGCCNTGNGGAGATATAACATGGATGAA
____________________________________________________________
consensus CCGTGATGCCNTGNGGAGATATAACATGGATGAA
. : . : . : . : . : . :
rJMSF031J24+ ATTGCTGGGGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
rJMFF019P12+ GGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
rJMSF019I10+ GGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
____________________________________________________________
consensus ATTGCTGGGGTATTATTACAGCTCGAGAGAATTGAACACGATGACGAGCTACGATATGAG
. : . : . : . : . : . :
rJMSF031J24+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
JMFN043H18- CACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCCACAT
rJMFF019P12+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
rJMSF019I10+ CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
____________________________________________________________
consensus CAACTGCTAGCACTCGAAACCAATGTGTTCCTCAATGGCATGAATTTCTACGACCAACAT
. : . : . : . : . : . :
rJMSF031J24+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
JMFN043H18- AGAGACGTGAGATTGGACATCGATAACCTGTCCTACGAGGAATTACTAGCTCTCGGGGAG
rJMFF019P12+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
rJMSF019I10+ AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
____________________________________________________________
consensus AGAGACATGAGATTGGACATCGATAACATGTCATACGAGGAATTACTAGCTCTCGGGGAG
. : . : . : . : . : . :
rJMSF031J24+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGGCGAAGCAATGTCAAAGTGCCTTAGGAGA
JMFN043H18- AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTATGAGA
rJMFF019P12+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
rJMSF019I10+ AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
____________________________________________________________
consensus AGGATGGGCACGGTAAGCACAGCTCTTTCTGACGAAGCAATGTCAAAGTGCCTTAGGAGA
. : . : . : . : . : . :
rJMSF031J24+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
JMFN043H18- AGCGTCTATCGGGTTACCTCTTCGGGAGTACGTGTTGCTGGATTGAAAGGGGGTGAAGAT
rJMFF019P12+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
rJMSF019I10+ AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
____________________________________________________________
consensus AGCGTCTATCGGGTTACCTCTTCGGGAGTAGGTGTTGCTGGATTGAAAGGGGGTGAAGAT
. : . : . : . : . : . :
rJMSF031J24+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
JMFN043H18- GACAACAAATTCACCATTTGCCCGGAGGAG
rJMFF019P12+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
rJMSF019I10+ GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
JMFN040F17- GGATGTTG
____________________________________________________________
consensus GACAACAAATGCAGTATTTGCCAGGAGGAGTATGTGCTCGGGGATGAGATGGGGATGTTG
. : . : . : . : . : . :
rJMSF031J24+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
rJMFF019P12+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
rJMSF019I10+ GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
JMFN040F17- GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
JMFS126D02+ ATGAAGAATTGG
____________________________________________________________
consensus GGATGCGAACATGGATACCATTTGGCGTGCGTTCATCAGTGGTTAAGGATGAAGAATTGG
. : . : . : . : . : . :
rJMSF031J24+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
rJMFF019P12+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
rJMSF019I10+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
JMFN040F17- TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
JMFS126D02+ TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
____________________________________________________________
consensus TGCCCTATCTGCAAGGCTTCTGCTGTTCCATCTCGGCCCTCTTCGCCCTTGTAATTCTTT
. : . : . : . : . : . :
rJMSF031J24+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
rJMFF019P12+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
rJMSF019I10+ TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
JMFN040F17- TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
JMFS126D02+ TCAAGCAACCTCGATCAGTGCCTACCACGATTTTGAGGGAATGGATTTGGTTTCCTCTTG
____________________________________________________________
consensus TCAAGCAACCTCGATCAGTGCCTACCACGATTCTGAGGGAATGGATTTGGTTTCCTCTTG
. : . : . : . : . : . :
rJMSF031J24+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
rJMFF019P12+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
rJMSF019I10+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
JMFN040F17- TACAGATCCCCTTCTGTTTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
JMFS126D02+ TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
____________________________________________________________
consensus TACAGATCCCCTTCTG-TTTTTTTCTCAAAAAACATCCTTTTACATGTTTTTGATTTGAA
. : . : . : . : . : . :
rJMSF031J24+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
rJMFF019P12+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
rJMSF019I10+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
JMFN040F17- TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
JMFS126D02+ TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
____________________________________________________________
consensus TAAGATGAAGAGTAGTCTTAGCAGTGATGATATTAACCATTGAAGCCCAGGCTGAAAGTT
. : . : . : . : . : . :
rJMSF031J24+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAA
rJMFF019P12+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTC
rJMSF019I10+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACGTTTCAATGTACAG
JMFN040F17- GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTACAG
JMFS126D02+ GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTCCAG
____________________________________________________________
consensus GCTTTGTGGTGTGAAGTTTTAAAGTTTCAGTTGGTTTTAATGTGACATTTCAATGTACAG
. : . : . : . : . : . :
rJMSF019I10+ AGAG
JMFN040F17- AGAG
JMFS126D02+ AGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
____________________________________________________________
consensus AGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
. : . : . : . : . : . :
JMFS126D02+ XXGAATTCGGCACGAGGCTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
JMFF003P08- GTGACTCGTGAGCCGACC
JMSF022B18- CTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
____________________________________________________________
consensus NNGAATTCGGCACGAGGCTCCTCTCTCTCCAATCTCCCAGCCGTGACTCGTGAGCCGACC
. : . : . : . : . : . :
JMFS126D02+ CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
JMFF003P08- CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
JMSF022B18- CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
____________________________________________________________
consensus CTCCACTGCCAGTCTGCCGTCGCCAACGACGCCGTCCGCACGAATCGTACAGAACCGAAA
. : . : . : . : . : . :
JMFS126D02+ GCTCTCACTTGTCGTCACTTTTCAC
JMFF003P08- GCTCTCACTTGTCGTCACTTTTCAC
JMSF022B18- GCTCTCACTTGTCGTCACTTTTCACATTTCAGCATCTCCCCCAATCTCACGTGCGCTCAG
____________________________________________________________
consensus GCTCTCACTTGTCGTCACTTTTCACATTTCAGCATCTCCCCCAATCTCACGTGCGCTCAG
. : . : . : . : . : . :
JMSF022B18- TCCCGATTTCCTCCTCCATTTCGAAGAGCTGCTGGTGATAGAGCTGCTGGCGATGATTGG
____________________________________________________________
consensus TCCCGATTTCCTCCTCCATTTCGAAGAGCTGCTGGTGATAGAGCTGCTGGCGATGATTGG
. : . : . : . : . : . :
JMSF022B18- CGACGAGCAATTTCAGATGGCAAACAATGCAAAGGCACTTGTTGTTCACGATACATCAAT
____________________________________________________________
consensus CGACGAGCAATTTCAGATGGCAAACAATGCAAAGGCACTTGTTGTTCACGATACATCAAT
. : . : . : . : . : . :
JMSF022B18- GTTGAACCATGTGGGTCAGAACAATTCCTCTGCATTTGCAAACCAGGGAATGCAAAATGG
____________________________________________________________
consensus GTTGAACCATGTGGGTCAGAACAATTCCTCTGCATTTGCAAACCAGGGAATGCAAAATGG
. : . : . : . : . : . :
JMSF022B18- AATTTTAGACTCACCTGCTTACAAAGCGAAGATATGTCAGGATGCTTTACAGGAGACTGG
____________________________________________________________
consensus AATTTTAGACTCACCTGCTTACAAAGCGAAGATATGTCAGGATGCTTTACAGGAGACTGG
. : . : . : . : . : . :
JMSF022B18- TCTGAGAGTCAAACAACATGAAGAAAATATGAAATTCTTAAAGACAAAGAAGAACAGATT
____________________________________________________________
consensus TCTGAGAGTCAAACAACATGAAGAAAATATGAAATTCTTAAAGACAAAGAAGAACAGATT
. : . : . : . : . : . :
JMSF022B18- GGATGATTCAATTATAGATCTGCAAGTTGCACTTGGCAAACATCACTCAGCAGCTGCACC
____________________________________________________________
consensus GGATGATTCAATTATAGATCTGCAAGTTGCACTTGGCAAACATCACTCAGCAGCTGCACC
. : . : . : . : . : . :
JMSF022B18- TAAAATTGAAAATGATCAAGATGCTCGGAGTGAGGAGGAGACAGTTAAACAGATTATGAG
____________________________________________________________
consensus TAAAATTGAAAATGATCAAGATGCTCGGAGTGAGGAGGAGACAGTTAAACAGATTATGAG