clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF021N07 | Sequence | 700 | 010683 (6) | ref|XP_009629822.1| | 2e-54 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | 779 | 010683 (6) | emb|CDP21060.1| | 4e-57 | unnamed protein product [Coffea canephora] |
JMSF038F13 | Sequence | 693 | 010683 (6) | ref|XP_009792971.1| | 1e-54 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] | 923 | 010683 (6) | emb|CDP21061.1| | 3e-86 | unnamed protein product [Coffea canephora] |
JMSF048B02 | Sequence | 693 | 010683 (6) | ref|XP_009792971.1| | 1e-54 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] | 782 | 010683 (6) | emb|CDP21061.1| | 2e-77 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF021N07- ATAATAATAATAATAGCAAAATAATAATTCAAA
____________________________________________________________
consensus ATAATAATAATAATAGCAAAATAATAATTCAAA
. : . : . : . : . : . :
rJMSF021N07- TTAAAATTACAATCCGTGATTGGAAGGAATTATAATTTCTTCCGACCAAACCATAAAATT
____________________________________________________________
consensus TTAAAATTACAATCCGTGATTGGAAGGAATTATAATTTCTTCCGACCAAACCATAAAATT
. : . : . : . : . : . :
rJMSF021N07- GTTTATTTCATGAAAACATACATAAGATTTAAGAAAATGATTTTGTAGTTTTTTTGGGGG
____________________________________________________________
consensus GTTTATTTCATGAAAACATACATAAGATTTAAGAAAATGATTTTGTAGTTTTTTTGGGGG
. : . : . : . : . : . :
rJMSF021N07- ACCACATTCCTCAAATTTTATTAGGATGACCAGCTCTATATACGAGCTTGGCGGAGTTAC
rJMSF048B02- CAGCTCTATATACGAGCTTGGCGGAGTTAC
rJMSF038F13- ACGAGCTTGGCGGAGTTAC
____________________________________________________________
consensus ACCACATTCCTCAAATTTTATTAGGATGACCAGCTCTATATACGAGCTTGGCGGAGTTAC
. : . : . : . : . : . :
rJMSF021N07- CAATGAATTACAAAATATTCTTAATCATAATAGGTGAATTTGGGAGAAGAAGCACATAAG
rJMSF048B02- CAATGAATTACAAAATATTCTTAATCATAATAGGTGAATTTGGGAGAAGAAGCACATAAG
rJMSF038F13- CAATGAATTACAAAATATTCTTAATCATAATAGGTGAATTTGGGAGAAGAAGCACATAAG
____________________________________________________________
consensus CAATGAATTACAAAATATTCTTAATCATAATAGGTGAATTTGGGAGAAGAAGCACATAAG
. : . : . : . : . : . :
rJMSF021N07- GTATTCATTGACGGACTCGTATAAGTTCCATCTAGTAAAGTCATGGTAACCAATCTATTT
rJMSF048B02- GTATTCATTGACGGACTCGTATAAGTTCCATCTAGTAAAGTCATGGTAACCAATCTATTT
rJMSF038F13- GTATTCATTGACGGACTCGTATAAGTTCCATCTAGTAAAGTCATGGTAACCAATCTATTT
____________________________________________________________
consensus GTATTCATTGACGGACTCGTATAAGTTCCATCTAGTAAAGTCATGGTAACCAATCTATTT
. : . : . : . : . : . :
rJMSF021N07- GCTTTTTCTGTCATGTGATTTCCGTCCCAATCAATATAATGCCATGGATCAGGACAACTA
rJMSF048B02- GCTTTTTCTGTCATGTGATTTCCGTCCCAATCAATATAATGCCATGGATCAGGACAACTA
rJMSF038F13- GCTTTTTCTGTCATGTGATTTCCGTCCCAATCAATATAATGCCATGGATCAGGACAACTA
____________________________________________________________
consensus GCTTTTTCTGTCATGTGATTTCCGTCCCAATCAATATAATGCCATGGATCAGGACAACTA
. : . : . : . : . : . :
rJMSF021N07- TTTTTTAATTTTATATTACCACATTTTACGTCGTCATTGTATCTATACGCCCCTCCTGCT
rJMSF048B02- TTTTTTAATTTTATATTACCACATTTTACGTCGTCATTGTATCTATACGCCCCTCCTGCT
rJMSF038F13- TTTTTTAATTTTATATTACCACATTTTACGTCGTCATTGTATCTATACGCCCCTCCTGCT
____________________________________________________________
consensus TTTTTTAATTTTATATTACCACATTTTACGTCGTCATTGTATCTATACGCCCCTCCTGCT
. : . : . : . : . : . :
rJMSF021N07- CCACAACAAGCCTCAAGGGAGTGCAAGAATCCATATTTCCCAGGATTACGATAAAGTTTC
rJMSF048B02- CCACAACAAGCCTCAAGGGAGTGCAAGAATCCATATTTCCCAGGATTACGATAAAGTTTC
rJMSF038F13- CCACAACAAGCCTCAAGGGAGTGCAAGAATCCATATTTCCCAGGATTACGATAAAGTTTC
____________________________________________________________
consensus CCACAACAAGCCTCAAGGGAGTGCAAGAATCCATATTTCCCAGGATTACGATAAAGTTTC
. : . : . : . : . : . :
rJMSF021N07- ATGACAGCATTGTAAAAATCAGCATAGATAATGACAACGTCAGGATTAAGACGACGGATG
rJMSF048B02- ATGACAGCATTGTAAAAATCAGCATAGATAATGACAACGTCAGGATTAAGACGACGGATG
rJMSF038F13- ATGACAGCATTGTAAAAATCAGCATAGATAATGACAACGTCAGGATTAAGACGACGGATG
____________________________________________________________
consensus ATGACAGCATTGTAAAAATCAGCATAGATAATGACAACGTCAGGATTAAGACGACGGATG
. : . : . : . : . : . :
rJMSF021N07- ATGTGGAGTCGTTTCTGAAGACGTTGATTGTGGAACTCGTTCAATTCATTTAACCAAGAA
rJMSF048B02- ATGTGGAGTCGTTTCTGAAGACGTTGATTGTGGAACTCGTTCAATTCATTTAACCAAGAA
rJMSF038F13- ATGTGGAGTCGTTTCTGAAGACGTTGATTGTGGAACTCGTTCAATTCATTTAACCAAGAA
____________________________________________________________
consensus ATGTGGAGTCGTTTCTGAAGACGTTGATTGTGGAACTCGTTCAATTCATTTAACCAAGAA
. : . : . : . : . : . :
rJMSF021N07- AGGCAACCAGTATCAGGATCATAATCTGAAGTGTTGGCACTTCCAAAATCTGTGAGAATG
rJMSF048B02- AGGCAACCAGTATCAGGATCATAATCTGAAGTGTTGGCACTTCCAAAATCTGTGAGAATG
rJMSF038F13- AGGCAACCAGTATCAGGATCATAATCTGAAGTGTTGGCACTTCCAAAATCTGTGAGAATG
____________________________________________________________
consensus AGGCAACCAGTATCAGGATCATAATCTGAAGTGTTGGCACTTCCAAAATCTGTGAGAATG
. : . : . : . : . : . :
rJMSF021N07- ACGGGAAGACAACCATCTGGAGATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
rJMSF048B02- ACGGGAAGACAACCATCTGGAGATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
rJMSF038F13- ACGGGAAGACAACCATCTGGAGATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
JMSF038F13+ GATAAGCTAGGTACCATGATNGTCGTTGCACCAAGTTTA
JMSF048B02+ GATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
JMSF021N07+ GAGATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
____________________________________________________________
consensus ACGGGAAGACAACCATCTGGAGATAAGCTAGGTACCATGATTGTCGTTGCACCAAGTTTA
. : . : . : . : . : . :
rJMSF021N07- ATCAA
rJMSF048B02- ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
rJMSF038F13- ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
JMSF038F13+ ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
JMSF048B02+ ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
JMSF021N07+ ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
____________________________________________________________
consensus ATCAAATCATTTATTGCTGCTGTGATGGTATCAATAACCATAGGAATGTATGTTCTTATC
. : . : . : . : . : . :
rJMSF048B02- TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
rJMSF038F13- TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
JMSF038F13+ TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
JMSF048B02+ TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
JMSF021N07+ TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
____________________________________________________________
consensus TCTTCGATGTCTTTTTCAAAGGTAAGTGCATGGCGATAGTCATTACTTCCAAAAGGCCCC
. : . : . : . : . : . :
rJMSF048B02- ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
rJMSF038F13- ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
JMSF038F13+ ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
JMSF048B02+ ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
JMSF021N07+ ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
____________________________________________________________
consensus ACTACAAAGAGGGAGTTTTTAAATTTTTTCCTACATTCTGAGGGTGTGTCACAGAACAAT
. : . : . : . : . : . :
rJMSF048B02- GGCAAAACATCTTTGAACCATATCATTTGGAC
rJMSF038F13- GGCAAAACATCTTTGAACCATATCATTTGGACGTTGAGGGAGGCGTTTGTAAAGGGATTA
JMSF038F13+ GGCAAAACATCTTTGAACCATATCATTTGGACGTTGAGGGAGGCGTTTGTAAAGGGATTA
JMSF048B02+ GGCAAAACATCTTTGAACCATATCATTTGGACGTTGAGGGAGGCGTTTGTAAAGGGATTA
JMSF021N07+ GGCAAAACATCTTTGAACCATATCATTTGGACGTTGAGGGAGGCGTTTGTAAAGGGATTA
____________________________________________________________
consensus GGCAAAACATCTTTGAACCATATCATTTGGACGTTGAGGGAGGCGTTTGTAAAGGGATTA
. : . : . : . : . : . :
rJMSF038F13- ATTATTCCTCTTGATTCATAGAACGCCGAGTCCACCGCAGCAGCTCCGCCAACCGCGAAA
JMSF038F13+ ATTATTCCTCTTGATTCATAGAACGCCGAGTCCACCGCAGCAGCTCCGCCAACCGCG-AA
JMSF048B02+ ATTATTCCTCTTGATTCATAGAACGCCGAGTCCACCGCAGCAGCTCCGCCAACCGCG-AA
JMSF021N07+ ATTATTCCTCTTGATTCATAGAACGCCGAGTCCACCGCAGCAGCTCCGCCAACCGCG-AA
____________________________________________________________
consensus ATTATTCCTCTTGATTCATAGAACGCCGAGTCCACCGCAGCAGCTCCGCCAACCGCG-AA
. : . : . : . : . : . :
rJMSF038F13- ATTCACACCTCCTTCAATACTTGACCCGTTTCCGGCAACACTAGCTGATGGAGGCATAAA
JMSF038F13+ ATTCACACCTCCTTCAATACTTGACCCGTTTCCGGCAACACTAGCTGATGGAGGCATAAA
JMSF048B02+ ATTCACACCTCCTTCAATACTTGACCCGTTTCCGGCAACACTAGCTGATGGAGGCATAAA
JMSF021N07+ ATTCACACCTCCTTCAATACTTGACCCGTTTCCGGCAACACTAGCTGATGGAGGCATAAA
____________________________________________________________
consensus ATTCACACCTCCTTCAATACTTGACCCGTTTCCGGCAACACTAGCTGATGGAGGCATAAA
. : . : . : . : . : . :
rJMSF038F13- CGCC
JMSF038F13+ CGCCACTCCATAATGCTCCGCTATAAAATCAATTATGATACGACCATCGCAAAAGCGACC
JMSF048B02+ CGCCACTCCATAATGCTCCGCTATAAAATCAATTATGATACGACCATCGCAAAAGCGACC
JMSF021N07+ CGCCACTCCATAATGCTCCGCTATAAAATCAATTATGATACGACCATCGCAAAAGCGACC
____________________________________________________________
consensus CGCCACTCCATAATGCTCCGCTATAAAATCAATTATGATACGACCATCGCAAAAGCGACC
. : . : . : . : . : . :
JMSF038F13+ GTTGGGATAATGAAAGAAGGTTTCTCCATAAGGAGGATTGGCCACGTTCAGGTTGGAAAG
JMSF048B02+ GTTGGGATAATGAAAGAAGGTTTCTCCATAAGGAGGATTGGCCACGTTCAGGTTGGAAAG
JMSF021N07+ GTTGGGATAATGAAAGAAGGTTTCTCCATAAGGAGGATTGGCCACGTTCAGGTTGGAAAG
____________________________________________________________
consensus GTTGGGATAATGAAAGAAGGTTTCTCCATAAGGAGGATTGGCCACGTTCAGGTTGGAAAG
. : . : . : . : . : . :
JMSF038F13+ GTCATGGGAGAAGAAAATCCTATTGCCCGCATCTGTAAGAGAGTCACCAAATGCAAAGAT
JMSF048B02+ GTCATGGGAGAAGAAAATCCTATTGCCCGCATCTGTAAGAGAGTCACCAAATGCAAAGAT
JMSF021N07+ GTCATGGGAGAAGAAAATCCTATTGCCCGCATCTGTAAGAGAGTCACCAAATGCAAAGAT
____________________________________________________________
consensus GTCATGGGAGAAGAAAATCCTATTGCCCGCATCTGTAAGAGAGTCACCAAATGCAAAGAT
. : . : . : . : . : . :
JMSF038F13+ GGATGTGTAGCATGCTAAGGTTTTGCTTCTTGGAATTATGAATATTAGGAGGAATATAGT
JMSF048B02+ GGATGTGTAGCATGCTAAGGTTTTGCTTCTTGGAATTATGAATATTAGGAGGAATATAGT
JMSF021N07+ GGATGTGTAGCATGCTAAGGTTTTGCTTCTTGGAATTATGAATATTAGGAGGAATATAGT
____________________________________________________________
consensus GGATGTGTAGCATGCTAAGGTTTTGCTTCTTGGAATTATGAATATTAGGAGGAATATAGT
. : . : . : . : . : . :
JMSF038F13+ GGAAATGAATTTCAACGCCATCTGGGAATAGAAGTAAATGTATGATAATACTA
JMSF048B02+ GGAAATGAATTTCAACGCCATCTGGGAATAGAAGTAAATGTATGATAATACTA
JMSF021N07+ GGAAATGAATTTCAACGCCATCTGGGAATAGAAGTAAATGTATGATAATACTATACCTCA
____________________________________________________________
consensus GGAAATGAATTTCAACGCCATCTGGGAATAGAAGTAAATGTATGATAATACTATACCTCA