| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021N21 | Sequence | 567 | 010672 (2) | gb|KDO80637.1| | 3e-78 | hypothetical protein CISIN_1g009233mg [Citrus sinensis] | 746 | 001107 (2) | ref|XP_009627331.1| | 7e-63 | PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif |
| JMSF020G10 | Sequence | 281 | 010672 (2) | ref|XP_009774511.1| | 4e-10 | PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana sylvestris | 728 | 001107 (2) | ref|XP_009627331.1| | 3e-68 | PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif |
This contig is upended
. : . : . : . : . : . :
JMFF021N21+ ATGTGAGCCAGCTTATCTAGGGCAGAAGAAACTCTAGCCTCAG
____________________________________________________________
consensus ATGTGAGCCAGCTTATCTAGGGCAGAAGAAACTCTAGCCTCAG
. : . : . : . : . : . :
JMFF021N21+ AGATGTGTACCTGTTTATGAGCTTGTGTGAGTGCTTCTTGCAAACCTGCAAGTTCCTTCT
____________________________________________________________
consensus AGATGTGTACCTGTTTATGAGCTTGTGTGAGTGCTTCTTGCAAACCTGCAAGTTCCTTCT
. : . : . : . : . : . :
JMFF021N21+ TCATTGTTCCAATAGATTTATAGTCACGGGCTAGAGGGTTTAATACTTCCACAACCTTCT
____________________________________________________________
consensus TCATTGTTCCAATAGATTTATAGTCACGGGCTAGAGGGTTTAATACTTCCACAACCTTCT
. : . : . : . : . : . :
JMFF021N21+ CGTGCAGAAGCATGATCGTAAGAACATCTTGACGAGCTTTCCAATCACAATACTGTATAT
____________________________________________________________
consensus CGTGCAGAAGCATGATCGTAAGAACATCTTGACGAGCTTTCCAATCACAATACTGTATAT
. : . : . : . : . : . :
JMFF021N21+ CATATCGAGCCACTTCTAAAGCTGTATTTACATCTAGGAACTTGCCTTTACATTGGGGAA
____________________________________________________________
consensus CATATCGAGCCACTTCTAAAGCTGTATTTACATCTAGGAACTTGCCTTTACATTGGGGAA
. : . : . : . : . : . :
JMFF021N21+ CTTTGGACCTTGGATCTTCTACATTAAAAAGTGTCAGCCATGGGCTTTTCTTGTCTACTA
JMSF020G10+ TACATTAAAAAGTGTCAGCCATGGGCTTTTCTTGTCTACTA
____________________________________________________________
consensus CTTTGGACCTTGGATCTTCTACATTAAAAAGTGTCAGCCATGGGCTTTTCTTGTCTACTA
. : . : . : . : . : . :
JMFF021N21+ ACCCGCCCTCCTCCCCATACATAGCAAACACTCCAAATCCTCCACGGACATACTTCTTAG
JMSF020G10+ ACCCGCCCTCCTCCCCATACATAGCAAACACTCCAAATCCTCCACGGACATACTTCTTAG
____________________________________________________________
consensus ACCCGCCCTCCTCCCCATACATAGCAAACACTCCAAATCCTCCACGGACATACTTCTTAG
. : . : . : . : . : . :
JMFF021N21+ AGTAAGACTTAGAGGAATGGGATGAAGAGAAAGGAAGACAGAGAGCAGTAGCAATGGCGG
JMSF020G10+ AGTAAGACTTAGAGGAATGGGATGAAGAGAAAGGAAGNCAGAGAGCAGTAGCAATGGCGG
____________________________________________________________
consensus AGTAAGACTTAGAGGAATGGGATGAAGAGAAAGGAAGACAGAGAGCAGTAGCAATGGCGG
. : . : . : . : . : . :
JMFF021N21+ CGGAGGACATGGTGAGGCGGCGGAATTTCAGCTTCTAAAACA-GCCGGCGACGGAGGATT
JMSF020G10+ CGGAGGACATGGTGAGGCGGCGGAATTTCAGCTTCTAAAACACGCCGGCGACGGAGGATT
____________________________________________________________
consensus CGGAGGACATGGTGAGGCGGCGGAATTTCAGCTTCTAAAACACGCCGGCGACGGAGGATT
. : . : . : . : . : . :
JMFF021N21+ AAGAGCTGCCGCGAAGAGACTGAGAGAGCGATGGAGTCAAAACTC
JMSF020G10+ AAGAGCTGCCGCGAAGAGACTGAGAGAGCGANGGAGTCAAAACTCAAAATTTCCTTNGTC
____________________________________________________________
consensus AAGAGCTGCCGCGAAGAGACTGAGAGAGCGATGGAGTCAAAACTCAAAATTTCCTTNGTC