| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF008F13 | Sequence | 484 | 010655 (5) | ref|XP_008222244.1| | 4e-49 | PREDICTED: ubiquitin thioesterase otubain-like [Prunus mume] ref|XP_008222245.1| | 771 | 010655 (5) | ref|XP_008369628.1| | 3e-118 | PREDICTED: ubiquitin thioesterase otubain-like [Malus domestica] ref|XP_00836962 |
| JMSF017P01 | Sequence | 421 | 010655 (5) | ref|XP_011457528.1| | 9e-17 | PREDICTED: ubiquitin thioesterase otubain-like [Fragaria vesca subsp. vesca] | 774 | 010655 (5) | ref|XP_008369628.1| | 2e-133 | PREDICTED: ubiquitin thioesterase otubain-like [Malus domestica] ref|XP_00836962 |
| JMSF018B11 | Sequence | 491 | 010655 (5) | ref|XP_008369628.1| | 4e-95 | PREDICTED: ubiquitin thioesterase otubain-like [Malus domestica] ref|XP_00836962 | 836 | 010092 (2) | ref|XP_011095951.1| | 422 | PREDICTED: putative MO25-like protein At5g47540 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF008F13- GCACAAGCAGTCA
____________________________________________________________
consensus GCACAAGCAGTCA
. : . : . : . : . : . :
rJMSF008F13- GTCAAATAACAAGAAATGTACATGGTCCAGGTTTCAAACTCACAAATTGTTCTCACAGAT
rJMSF017P01- AACTCACAAATTGTTCTCACAGAT
____________________________________________________________
consensus GTCAAATAACAAGAAATGTACATGGTCCAGGTTTCAAACTCACAAATTGTTCTCACAGAT
. : . : . : . : . : . :
rJMSF008F13- CATCAAACTACAAAGTAACATCTATTGCAATGAAAATCCAGTCAACCGGGGCACATGTTA
rJMSF017P01- CATCAAACTACAAAGTAACATCTATTGCAATGAAAATCCAGTCAACCGGGGCACATGTTA
____________________________________________________________
consensus CATCAAACTACAAAGTAACATCTATTGCAATGAAAATCCAGTCAACCGGGGCACATGTTA
. : . : . : . : . : . :
rJMSF008F13- GTTAACATGTGTCTGTCATTTAGGGTACAGAATGTCATAATGACCTGGTCGGTATAGCAA
rJMSF017P01- GTTAACATGTGTCTGTCATTTAGGGTACAGAATGTCATAATGACCTGGTCGGTATAGCAA
____________________________________________________________
consensus GTTAACATGTGTCTGTCATTTAGGGTACAGAATGTCATAATGACCTGGTCGGTATAGCAA
. : . : . : . : . : . :
rJMSF008F13- GGTAATAAATGGAGGAGCTGGGGCCTGGGTCTTGGAATCACCATTATCAGCACTGGGGAT
rJMSF017P01- GGTAATAAATGGAGGAGCTGGGGCCTGGGTCTTGGAATCACCATTATCAGCACTGGGGAT
____________________________________________________________
consensus GGTAATAAATGGAGGAGCTGGGGCCTGGGTCTTGGAATCACCATTATCAGCACTGGGGAT
. : . : . : . : . : . :
rJMSF008F13- GCCATGGTTGACAGGAACGAAGTCATGGTGGTTTACACTAACCCCACTGTTTTCACATGA
rJMSF017P01- GCCATGGTTGACAGGAACGAAGTCATGGTGGTTTACACTAACCCCACTGTTTTCACATGA
____________________________________________________________
consensus GCCATGGTTGACAGGAACGAAGTCATGGTGGTTTACACTAACCCCACTGTTTTCACATGA
. : . : . : . : . : . :
rJMSF008F13- GCTGCGATCAAGATACACAACACGGATTGGAACACCCAAGGCATCTGACAAGGCTGTAAT
rJMSF017P01- GCTGCGATCAAGATACACAACACGGATTGGAACACCCAAGGCATCTGACAAGGCTGTAAT
____________________________________________________________
consensus GCTGCGATCAAGATACACAACACGGATTGGAACACCCAAGGCATCTGACAAGGCTGTAAT
. : . : . : . : . : . :
rJMSF008F13- GTGCACATGATCACTCTCTTCACCCATTGGTTCTACCGAAGACTTGCAAAACTGTTCCAC
rJMSF017P01- GTGCACATGATCACTCTCTTCACCCATTGGTTCTACCGAAGACTTGCAAAACTGTTCCAC
____________________________________________________________
consensus GTGCACATGATCACTCTCTTCACCCATTGGTTCTACCGAAGACTTGCAAAACTGTTCCAC
. : . : . : . : . : . :
rJMSF008F13- CGAAGCATTTGATAATCCTAGTATAAACGGCTCAAAAAACTCTGAGCGTTTCTTTATCTC
rJMSF017P01- CGAAGCATTTGATAATCCTAGTATAAACGGCTCAAAAAACTCTGAGCGTTTCTTTATCTC
JMSF018B11+ TAGTATAAACGGCTCAAAAAACTCTGAGCGTTTCTTTATCTC
____________________________________________________________
consensus CGAAGCATTTGATAATCCTAGTATAAACGGCTCAAAAAACTCTGAGCGTTTCTTTATCTC
. : . : . : . : . : . :
rJMSF008F13- ACCAGAGGTCACAAATCTGAAGAACATTACAATATAGTCAGAGACTGATTGGTCACGGCA
rJMSF017P01- ACCAGAGGTCACAAATCTGAAGAACATTACAATATAGTCAGAGACTGATTGGTCACGGCA
JMSF018B11+ ACCAGAGGTCACAAATCTGAAGAACATTACAATATAGTCAGAGACTGATTGGTCACGGCA
____________________________________________________________
consensus ACCAGAGGTCACAAATCTGAAGAACATTACAATATAGTCAGAGACTGATTGGTCACGGCA
. : . : . : . : . : . :
rJMSF008F13- TCTTTGTAGGAGTTCATCATGGCTTATGGAAGCTTCGCTGCTTTGAAGAACACTATCAAG
rJMSF017P01- TCTTTGTAGGAGTTCATCATGGCTTATGGAAGCTTCGCTGCTTTGAAGAACACTATCAAG
JMSF018B11+ TCTTTGTAGGAGTTCATCATGGCTTATGGAAGCTTCGCTGCTTTGAAGAACACTATCAAG
____________________________________________________________
consensus TCTTTGTAGGAGTTCATCATGGCTTATGGAAGCTTCGCTGCTTTGAAGAACACTATCAAG
. : . : . : . : . : . :
rJMSF008F13- TTGCTCGATGAATAACGCAAAAAAATCTTCAAACGTAAATTCTGCATAGCCCAGACTTTG
rJMSF017P01- TTGCTCGATGAATAACGCAAAAAAATCTTCAAACGTAAATTCTGCATAGCCCAGACTTTG
JMSF018B11+ TTGCTCGATGAATAACGCAAAAAAATCTTCAAACGTAAATTCTGCATAGCCCAGACTTTG
____________________________________________________________
consensus TTGCTCGATGAATAACGCAAAAAAATCTTCAAACGTAAATTCTGCATAGCCCAGACTTTG
. : . : . : . : . : . :
rJMSF008F13- AAGTGTTTTTCTGCATTCCTCCACATTGACTTTTATACGCTCAACTTCTTTTTGGTCTTG
rJMSF017P01- AAGTGTTTTTCTGCATTCCTCCACATTGACTTTTATACGCTCAACTTCTTTTTGGTCTTG
JMSF018B11+ AAGTGTTTTTCTGCATTCCTCCACATTGACTTTTATACGCTCAACTTCTTTTTGGTCTTG
JMSF008F13+ TTATACGCTCAACTTCTTTTTGGTCTTG
____________________________________________________________
consensus AAGTGTTTTTCTGCATTCCTCCACATTGACTTTTATACGCTCAACTTCTTTTTGGTCTTG
. : . : . : . : . : . :
rJMSF008F13- TGCTTCCAAAATATGTTCANGGTAAGCAAACATGAAGC
rJMSF017P01- TGCTTCCAAAATATGTTCAAGGTAAGCAAACATGAAGCTTCGGAAAAAGCAGTTTCCATC
JMSF018B11+ TGCTTCCAAAATATGTTCAAGGTAAGCAAACATGAAGCTTCGGAAAAAGCAGTTTCCATC
JMSF008F13+ TGCTTCCAAAATATGTTCAAGGTAAGCAAACATGAAGCTTCGGAAAAAGCAGTTTCCATC
____________________________________________________________
consensus TGCTTCCAAAATATGTTCAAGGTAAGCAAACATGAAGCTTCGGAAAAAGCAGTTTCCATC
. : . : . : . : . : . :
rJMSF017P01- CCCACGTGTTCTTCTGATGGAATTATATTG
JMSF018B11+ CCCACGTGTTCTTCTGATGGAATTATATTGTTCACTCAGAACCTTTATCTTCTGCAATAG
JMSF008F13+ CCCACGTGTTCTTCTGATGGAATTATATTGTTCACTCAGAACCTTTATCTTCTGCAATAG
JMSF017P01+ G
____________________________________________________________
consensus CCCACGTGTTCTTCTGATGGAATTATATTGTTCACTCAGAACCTTTATCTTCTGCAATAG
. : . : . : . : . : . :
JMSF018B11+ AATTGGACTTCCTGATTGATATTCAGCCTCCAACGATAACAGAGGTTCCTTATCACCTAC
JMSF008F13+ AATTGGACTTCCTGATTGATATTCAGCCTCCAACGATAACAGAGGTTCCTTATCACCTAC
JMSF017P01+ AATTGGACTTCCTGATTGATATTCAGCCTCCAACGATAACAGAGGTTCCTTATCACCTAC
____________________________________________________________
consensus AATTGGACTTCCTGATTGATATTCAGCCTCCAACGATAACAGAGGTTCCTTATCACCTAC
. : . : . : . : . : . :
JMSF018B11+ AAACGGAAGCTTCTCAGCTTCCTCAGCCC
JMSF008F13+ AAACGGAAGCTTCTCAGCTTCCTCAGCCCGAATAACAGAATGCTGCTGCATAATATCATT
JMSF017P01+ AAACGGAAGCTTCTCAGCTTCCTCAGCCCGAATAACAGAATGCTGCTGCATAATATCATT
____________________________________________________________
consensus AAACGGAAGCTTCTCAGCTTCCTCAGCCCGAATAACAGAATGCTGCTGCATAATATCATT
. : . : . : . : . : . :
JMSF008F13+ ATCCCCAAATTTTGTCCAATCATCAACTTCAGATGCTTGAGCAGATGCTGAGATTTCAAT
JMSF017P01+ ATCCCCAAATTTTGTCCAATCATCAACTTCAGATGCTTGAGCAGATGCTGAGATTTCAAT
____________________________________________________________
consensus ATCCCCAAATTTTGTCCAATCATCAACTTCAGATGCTTGAGCAGATGCTGAGATTTCAAT
. : . : . : . : . : . :
JMSF008F13+ CTCAGCATCAGTTGTCTGCCCCTCCTGACCTTGCATCTCCTCTTCAGCAATAAAAGTATA
JMSF017P01+ CTCAGCATCAGTTGTCTGCCCCTCCTGACCTTGCATCTCCTCTTCAGCAATAAAAGTATA
____________________________________________________________
consensus CTCAGCATCAGTTGTCTGCCCCTCCTGACCTTGCATCTCCTCTTCAGCAATAAAAGTATA
. : . : . : . : . : . :
JMSF008F13+ AGCTCCCTAGTAAAGACCTTTCTCAGACGATCCGAGAGAGAATCGAAGACGAAACAAGTC
JMSF017P01+ AGCTCCCTAGTAAAGACCTTTCTCAGACGATCCGAGAGAGAATCGAAGACGAAACAAGTC
____________________________________________________________
consensus AGCTCCCTAGTAAAGACCTTTCTCAGACGATCCGAGAGAGAATCGAAGACGAAACAAGTC
. : . : . : . : . : . :
JMSF008F13+ TGGACTGGAGAGGAGAGTGCAAGCAATTATTACTT
JMSF017P01+ TGGACTGGAGAGGAGAGTGCAAGCAATTATTACTTGGCTAGTCGCTAGTGCGATGGTACG
____________________________________________________________
consensus TGGACTGGAGAGGAGAGTGCAAGCAATTATTACTTGGCTAGTCGCTAGTGCGATGGTACG
. : . : . : . : . : . :
JMSF017P01+ GTACTATCCTATGACTGCTCAGCTTGTGAGTGGGTTGCGGATCAGTTTCAGGTTTTCACC
____________________________________________________________
consensus GTACTATCCTATGACTGCTCAGCTTGTGAGTGGGTTGCGGATCAGTTTCAGGTTTTCACC