Contig 010653:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017L24Sequence326010653 (6)emb|CDP11291.1|6e-15unnamed protein product [Coffea canephora]750008495 (2)ref|XP_006358149.1|3e-63PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570
JMSF021N13Sequence630010653 (6)ref|XP_009799273.1|5e-54PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570806010653 (6)ref|XP_011078427.1|1e-45PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Sesamum indi
JMSF034B09Sequence645010653 (6)emb|CDP21851.1|3e-56unnamed protein product, partial [Coffea canephora]661017206ref|XP_011078429.1|3e-13PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570
JMSF050F24Sequence623010653 (6)ref|XP_009799273.1|2e-52PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570759021603ref|XP_011078428.1|5e-49PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570
JMSF052L08Sequence608021205961010653 (6)ref|XP_011078429.1|1e-62PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570

Alignment

This contig is upended


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rJMSF021N13-                                                     CCACATATAAAGGTATT
                      ____________________________________________________________
consensus                                                        CCACATATAAAGGTATT
 
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rJMSF021N13-          CAAGTGAAGAGCAATCACCTATGCTCCTTGGAATGTTGCCATATAGCTTGTTATTATACA
                      ____________________________________________________________
consensus             CAAGTGAAGAGCAATCACCTATGCTCCTTGGAATGTTGCCATATAGCTTGTTATTATACA
 
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rJMSF021N13-          AGAAAAGCTCTTCAAGCTTTTGCAAACGTGAACACATGTTCAATGGGAGAATACCAAATA
                      ____________________________________________________________
consensus             AGAAAAGCTCTTCAAGCTTTTGCAAACGTGAACACATGTTCAATGGGAGAATACCAAATA
 
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rJMSF021N13-          GACTATTGTTTGCCATGTTTATATAAGTTAGTGTAGAAATGTTAAATATTGTTTCTGGTA
                      ____________________________________________________________
consensus             GACTATTGTTTGCCATGTTTATATAAGTTAGTGTAGAAATGTTAAATATTGTTTCTGGTA
 
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rJMSF021N13-          TTGTTCCTTCCAAATTGTTATTATCGAGTCTTAATATCTGAAGCATATTCAAATTCCCAA
                      ____________________________________________________________
consensus             TTGTTCCTTCCAAATTGTTATTATCGAGTCTTAATATCTGAAGCATATTCAAATTCCCAA
 
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rJMSF021N13-          TCTCTCTTGGTATTTCACCTGACAATGAATTCTCAGTAAGTTGAAGATTGTTTAGCATTG
rJMSF052L08-                          ACCTGACAATGAATTCTCAGTAAGTTGAAGATTGTTTAGCATTG
                      ____________________________________________________________
consensus             TCTCTCTTGGTATTTCACCTGACAATGAATTCTCAGTAAGTTGAAGATTGTTTAGCATTG
 
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rJMSF021N13-          TCAAATTTCCAATCTCTCTTGGCAACGATCCATTTAATTGATTATCCCACATATAAAGGT
rJMSF052L08-          TCAAATTTCCAATCTCTCTTGGCAACGATCCATTTAATTGATTATCCCACATATAAAGGT
                      ____________________________________________________________
consensus             TCAAATTTCCAATCTCTCTTGGCAACGATCCATTTAATTGATTATCCCACATATAAAGGT
 
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rJMSF021N13-          ATTCAAGCGATGAGCATTCACCTATGCTCCTTGGAATGTTGCCATATAGCTTGTTCTTAT
rJMSF052L08-          ATTCAAGCGATGAGCATTCACCTATGCTCCTTGGAATGTTGCCATATAGCTTGTTCTTAT
                      ____________________________________________________________
consensus             ATTCAAGCGATGAGCATTCACCTATGCTCCTTGGAATGTTGCCATATAGCTTGTTCTTAT
 
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rJMSF021N13-          ACAAGTAAAGCTCTTCAAGCTTTTGCAAACGTGAACACATGTTCAATGGGAGAATACCAA
rJMSF052L08-          ACAAGTAAAGCTCTTCAAGCTTTTGCAAACGTGAACACATGTTCAATGGGAGAATACCAA
                      ____________________________________________________________
consensus             ACAAGTAAAGCTCTTCAAGCTTTTGCAAACGTGAACACATGTTCAATGGGAGAATACCAA
 
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rJMSF021N13-          ATAGACTGTTGTTTGCCATGTTTATATAAGTTAGTGTAGAAATGTTAAATATTGTTTCTG
rJMSF052L08-          ATAGACTGTTGTTTGCCATGTTTATATAAGTTAGTGTAGAAATGTTAAATATTGTTTCTG
                      ____________________________________________________________
consensus             ATAGACTGTTGTTTGCCATGTTTATATAAGTTAGTGTAGAAATGTTAAATATTGTTTCTG
 
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rJMSF021N13-          GTATTGTTCCTTCCAAATTGTTATTATCGAGTCTTAAAATTTGAAGCATATTCAAGTTCC
rJMSF052L08-          GTATTGTTCCTTCCAAATTGTTATTATCGAGTCTTAAAATTTGAAGCATATTCAAGTTCC
                      ____________________________________________________________
consensus             GTATTGTTCCTTCCAAATTGTTATTATCGAGTCTTAAAATTTGAAGCATATTCAAGTTCC
 
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rJMSF021N13-          CAATCTCTCTTGGTATTTCACCT                                     
rJMSF052L08-          CAATCTCTCTTGGTATTTCACCTTCTAAGTTGTTATTACCGAGTCTTATAATCCGAAGCA
                      ____________________________________________________________
consensus             CAATCTCTCTTGGTATTTCACCTTCTAAGTTGTTATTACCGAGTCTTATAATCCGAAGCA
 
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rJMSF052L08-          TAGTCAAGCTCTCAATCTCTCTCGGAATTGTCCCAACAAAATTGTTGTAACCCAACCGCA
                      ____________________________________________________________
consensus             TAGTCAAGCTCTCAATCTCTCTCGGAATTGTCCCAACAAAATTGTTGTAACCCAACCGCA
 
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rJMSF052L08-          ATTGTTCAAGTTCGGAGCAACTTGACAAATTCTTTGGAATATCACCACTTAACTTGTTGA
JMSF034B09+                         GAGCAACCTGATAAATTCTTTGGAATATCACCACTCAACTTGTTGG
JMSF021N13+                                      AATTCTTTGGAATATCACCACTCAACTTGTTGG
JMSF050F24+                                               GAATATCACCACTCAACTTGTTGG
                      ____________________________________________________________
consensus             ATTGTTCAAGTTCGGAGCAACTTGATAAATTCTTTGGAATATCACCACTCAACTTGTTGG
 
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rJMSF052L08-          AATAGAGGCAAAGCACTTTGAGTCTTGTAGCGTGTTGACATAGATTCATTGGAAGAGAGG
JMSF034B09+           AATACAAGTGAAGCACTTTGAGTCTTGTAGCATGTTGACATAGTTTCATTGGAAGAGTGC
JMSF021N13+           AATACAAGTGAAGCACTTTGAGTCTTGTAGCATGTTGACATAGTTTCATTGGAAGAGTGC
JMSF050F24+           AATACAAGNGAAGCACTTTGAGTCTTGTAGCATGTTGACATAGTTTCATTGGAAGAGTGC
                      ____________________________________________________________
consensus             AATACAAGTGAAGCACTTTGAGTCTTGTAGCATGTTGACATAGTTTCATTGGAAGAGTGC
 
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rJMSF052L08-          TAGATAAGCTA--ATTGTTGAGGACCAAATTTTGTAATGTGGAAATGTTGAAGATGGTGA
JMSF034B09+           TAGAAAAGCTATTTTTGTTAAGGACCAAATTTTGTAATGTGGAAATGTTGAAGATGGTGA
JMSF021N13+           TAGAAAAGCTATTTTTGTTAAGGACCAAATTTTGTAATGTGGAAATGTTGAAGATGGTGA
JMSF050F24+           TAGAAAAGCTATTTTTGTTAAGGACCAAATTTTGTAATGTGGAAATGTTGAAGATGGTGA
                      ____________________________________________________________
consensus             TAGAAAAGCTATTTTTGTTAAGGACCAAATTTTGTAATGTGGAAATGTTGAAGATGGTGA
 
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rJMSF052L08-          AGGGGATAGAACCATCAAGTTGGTTAACTTCTAATATCAGCCATTTTGCATTCTCAAGAT
JMSF034B09+           AGGGGATAGGCCCATCAAGTTGGTTAACTTCCAATATTAGCCATTTTGCATGCTCAAGAT
JMSF021N13+           AGGGGATAGGCCCATCAAGTTGGTTAACTTCCAATATTAGCCATTTTGCATGCTCAAGAT
JMSF050F24+           AGGGGATAGGCCCATCAAGTTGGTTAACTTCCAATATTAGCCATTTTGCATGCTCAAGAT
                      ____________________________________________________________
consensus             AGGGGATAGGCCCATCAAGTTGGTTAACTTCCAATATTAGCCATTTTGCATGCTCAAGAT
 
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rJMSF052L08-          TGCCAATCTCTTGTGGAATTTTTCCACTAAAATGATTATAACCAAAATCTATGTAT    
JMSF034B09+           TGCCAATCTCCTCTGGAATTTTTCCACTAAAATTATTATAACCAAAATCTAAGTATTGTA
JMSF021N13+           TGCCAATCTCCTCTGGAATTTTTCCACTAAAATTATTATAACCAAAATCTAAGTATTGTA
JMSF050F24+           TGCCAATCTCCTCTGGAATTTTTCCACTAAAATTATTATAACCAAAATCTAAGTATNGTA
                      ____________________________________________________________
consensus             TGCCAATCTCCTCTGGAATTTTTCCACTAAAATTATTATAACCAAAATCTAAGTATTGTA
 
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JMSF034B09+           GTCGGCGTAGGCTGGCTAACTCTCTAGGCAAATTTCCATAGAAACTGTTGTGACTTATGT
JMSF021N13+           GTCGGCGTAGGCTGGCTAACTCTCTAGGCAAATTTCCATAGAAACTGTTGTGACTTATGT
JMSF050F24+           GTCGGCGTAGGCTGGCTAACTCTCTAGGCAAATTTCCATAGAAACTGTTGTGACTTATGT
                      ____________________________________________________________
consensus             GTCGGCGTAGGCTGGCTAACTCTCTAGGCAAATTTCCATAGAAACTGTTGTGACTTATGT
 
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JMSF034B09+           TAAGAGAAACAAGAAAAGAGAGGTTGCCTAGTTGTGGAGGAAGGGTACCCACAATACCCA
JMSF021N13+           TAAGAGAAACAAGAAAAGAGAGGTTGCCTAGTTGTGGAGGAAGGGTACCCACAATACCCA
JMSF050F24+           TAAGAGAAACAAGAAAAGAGAGGTTGCCTAGTTGTGGAGGAAGGGTACCCACAATACCCA
JMSF017L24+                                                AGGAAGGGTACCCAGAATACCCA
                      ____________________________________________________________
consensus             TAAGAGAAACAAGAAAAGAGAGGTTGCCTAGTTGTGGAGGAAGGGTACCCACAATACCCA
 
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JMSF034B09+           TATTTGATATGTCTAATGCGACCACTCTATGGTGTTTGGATCCGCAAACAACTCCAATCC
JMSF021N13+           TATTTGATATGTCTAATGCGACCACTCTATGGTGTTTGGATCCGCAAACAACTCCAATCC
JMSF050F24+           TATTTGATATGTCTAATGCGACCACTCTATGGTGTTTGGATCCGCAAACAACTCCAATCC
JMSF017L24+           TACTTGATATGTCTAATGCGACCACTCTGTGGTGTTTGGATCCGCAAACAACTCCAATCC
                      ____________________________________________________________
consensus             TATTTGATATGTCTAATGCGACCACTCTATGGTGTTTGGATCCGCAAACAACTCCAATCC
 
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JMSF034B09+           AGTTGCAAATAGAAGCACTGATTGACCAGTTATTTGCCAATGTATGGTTGGGACTTAAGG
JMSF021N13+           AGTTGCAAATAGAAGCACTGATTGACCAGTTATTTGCCAATGTATGGTTGGGACTTAAGG
JMSF050F24+           AGTTGCAAATAGAAGCACTGATTGACCAGTTATTTGCCAATGTATGGTTGGGACTTAAGG
JMSF017L24+           AGTTGCAAATAGAAGCAGTGATTGACCAGTTATTTGCCAATGTATGGTTGGGACTTAAGG
                      ____________________________________________________________
consensus             AGTTGCAAATAGAAGCACTGATTGACCAGTTATTTGCCAATGTATGGTTGGGACTTAAGG
 
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JMSF034B09+           TGGTGTAGGATTTCAAAGAAAGAAGAGAGGATTGATCAGTGGTGATGTTGGTGGGTTGGG
JMSF021N13+           TGGTGTAGGATTTCAAAGAAAGAAGAGAGGATTGATCAGTGGTGATGTTGGTGGGTTGGG
JMSF050F24+           TGGTGTAGGATTTCAAAGAAAGAAGAGAGGATTGATCAGTGGTGATGTTGGTGGGTTGGG
JMSF017L24+           TGGTGTAGGATTTCAAAGAAAGAAGAGAGGATTGATCAGTGGTGATGTTGGTGGGTAGGG
                      ____________________________________________________________
consensus             TGGTGTAGGATTTCAAAGAAAGAAGAGAGGATTGATCAGTGGTGATGTTGGTGGGTTGGG
 
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JMSF034B09+           CGCTGGGTATGAAAGGCATTGCTAAAATGAACAAGGAGAATAGAGAAGATA         
JMSF021N13+           CGCTGGGTATGAAAGGCATTGCTAAAATGAACAAGGAGAATAGAGAAGATA         
JMSF050F24+           CGCTGGGTATGAAAGGCATTGCTAAAATGAACAAGGAGAATAGAGAAGATA         
JMSF017L24+           CGCTGGGTATGAAAGCCAATGCTAAAATGAAGAAGGAGAGTAGAGAAGATAGGTTTGTGA
                      ____________________________________________________________
consensus             CGCTGGGTATGAAAGGCATTGCTAAAATGAACAAGGAGAATAGAGAAGATAGGTTTGTGA
 
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JMSF017L24+           TCTCCATGTTAGTATGCATATATGACAATTGATACGGGCTAATTAAGGTTTCCATGAATC
                      ____________________________________________________________
consensus             TCTCCATGTTAGTATGCATATATGACAATTGATACGGGCTAATTAAGGTTTCCATGAATC