Contig 010652:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017G17Sequence462010652 (6)gb|KHG26714.1|3e-05E3 ubiquitin-protein ligase RFWD3 [Gossypium arboreum]803012406 (7)ref|XP_004230247.1|224PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF021C16Sequence695010652 (6)ref|XP_011092090.1|4e-66PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]786012406 (7)ref|XP_004230247.1|258PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF028C03Sequence639010652 (6)ref|XP_011092090.1|3e-46PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]700012406 (7)ref|XP_004230247.1|220PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF034O12Sequence666010652 (6)ref|XP_011092090.1|3e-64PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]689012406 (7)ref|XP_004230247.1|220PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF052I05Sequence678010652 (6)ref|XP_011092090.1|4e-64PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]863012406 (7)ref|XP_004230247.1|297PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF052O15Sequence675010652 (6)ref|XP_011092089.1|3e-56PREDICTED: uncharacterized protein LOC105172390 isoform X1 [Sesamum indicum]925012406 (7)ref|XP_009607263.1|6e-106PREDICTED: uncharacterized protein LOC104101509 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF021C16+                             TCAAAAGATGAAGGCAGTCTAGTCAGACCACTAAATGGACAC
JMSF034O12+                        CTTCGTCAAAAGATGAAGGCAGTCTAGTCAGACCACTAAATGGACAC
JMSF052I05+                        CTTCGTCAAAAGATGAAGGCAGTCTAGTCAGACCACTAAATGGACAC
JMSF052O15+                                                        CCACTAAATGGACAC
                      ____________________________________________________________
consensus                          CTTCGTCAAAAGATGAAGGCAGTCTAGTCAGACCACTAAATGGACAC
 
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JMSF021C16+           CAGTGAACTCCAAATGACATTTCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
JMSF034O12+           CAGTGAACTCCAAATGACATTTCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
JMSF052I05+           CAGTGAACTCCAAATGACATTTCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
JMSF052O15+           CAGTGAACTCCAAATGACATTTCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
JMSF028C03+                                TCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
                      ____________________________________________________________
consensus             CAGTGAACTCCAAATGACATTTCAGAGTAACTTAGATCATATAGGTCCTCATCATGGGCC
 
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JMSF021C16+           CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
JMSF034O12+           CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
JMSF052I05+           CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
JMSF052O15+           CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
JMSF028C03+           CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
                      ____________________________________________________________
consensus             CAATCATCCATGCTAAACTCAGGGAGAGAACGATGCCCACTTGCATAAAGCCATTGACCT
 
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JMSF021C16+           TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
JMSF034O12+           TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
JMSF052I05+           TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
JMSF052O15+           TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
JMSF028C03+           TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
                      ____________________________________________________________
consensus             TTCTCAACTTTTCGACAATTGGGGCATTGCATTGCTCCTTTTATATTAAAGGCAGATCCA
 
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JMSF021C16+           ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
JMSF034O12+           ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
JMSF052I05+           ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
JMSF052O15+           ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
JMSF028C03+           ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
JMSF017G17+                             TCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
                      ____________________________________________________________
consensus             ATGCAATCCAGGTGGAATTCATGACCGCATTGAAGCTTAGCCCAAGATCTATCCCCATTA
 
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JMSF021C16+           CGATTCACCGTTCCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
JMSF034O12+           CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
JMSF052I05+           CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
JMSF052O15+           CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
JMSF028C03+           CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCAACACCTTGCCGGCTCCG
JMSF017G17+           CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
                      ____________________________________________________________
consensus             CGATTCACCGTTTCAAGGCAAATCGAACACGACTCCGGTGCCGACACCTTGCCGGCTCCG
 
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JMSF021C16+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
JMSF034O12+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
JMSF052I05+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
JMSF052O15+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
JMSF028C03+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
JMSF017G17+           CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
                      ____________________________________________________________
consensus             CCTCCACCATCGCCGTCGTCAAGAAGATCCACATCGTCCAATCCCATAAATAAGCAATCC
 
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JMSF021C16+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
JMSF034O12+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
JMSF052I05+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
JMSF052O15+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
JMSF028C03+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
JMSF017G17+           CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
                      ____________________________________________________________
consensus             CAAAATCCTATATCCCACCCGATATCGTATAAATCATTTAAATTTACTCATAAAAAACCG
 
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JMSF021C16+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
JMSF034O12+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
JMSF052I05+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
JMSF052O15+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
JMSF028C03+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
JMSF017G17+           AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
                      ____________________________________________________________
consensus             AAATAAATCCAAGAACACGTCTGTTTCTTATCTTTTTTTGCCCTCTGAAAAAGTGATAAT
 
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JMSF021C16+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
JMSF034O12+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
JMSF052I05+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
JMSF052O15+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
JMSF028C03+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
JMSF017G17+           TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
                      ____________________________________________________________
consensus             TAAATGAAAAGCATAGAATCGGGCGATACAGAGAAAGTGGGTGTGGATTAGGAGGAGCTA
 
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JMSF021C16+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
JMSF034O12+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
JMSF052I05+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
JMSF052O15+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
JMSF028C03+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
JMSF017G17+           AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
                      ____________________________________________________________
consensus             AGATAGAAGAAGAAGACGAAGAATAAGAAGAAGGAGGAGGATAGAGAGAGCGTTAAGCGG
 
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JMSF021C16+           TGGGTGTAGAAAAACTGTGAACCTCTTCTT                              
JMSF034O12+           TGGGTGTAGAAAAACTG                                           
JMSF052I05+           TGGGTGTAGAAAAACTGTGAACCTCTTCTT                              
JMSF052O15+           TGGGTGTAGAAAAACTGTGAACCTCTTCTTGCTTTTGCTTTCTATTTTTCTTCATTTC  
JMSF028C03+           TGGGTGTAGAAAAACTGTGAACCTCTTCTTGCTTTTGCTTTCTATTTTTCTTCATTTC  
JMSF017G17+           TGGGTGTAGAAAAACTGTGAACCTCTTCTTGCTTTTGCTTTCTATTTTTCTTCATTTCTC
                      ____________________________________________________________
consensus             TGGGTGTAGAAAAACTGTGAACCTCTTCTTGCTTTTGCTTTCTATTTTTCTTCATTTCTC