| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF017C13 | Sequence | 361 | 010649 (7) | 751 | 010649 (7) | ref|XP_007212009.1| | 1e-114 | hypothetical protein PRUPE_ppa011189mg [Prunus persica] gb|EMJ13208.1| hypotheti | |||
| JMSF040I07 | Sequence | 532 | 010649 (7) | ref|XP_006348346.1| | 6e-40 | PREDICTED: fatty-acid-binding protein 3-like [Solanum tuberosum] | |||||
| JMSF040J07 | Sequence | 662 | 010649 (7) | ref|XP_006348346.1| | 3e-67 | PREDICTED: fatty-acid-binding protein 3-like [Solanum tuberosum] | 838 | 010649 (7) | ref|XP_011098156.1| | 1e-116 | PREDICTED: fatty-acid-binding protein 3 [Sesamum indicum] |
| JMSF043E17 | Sequence | 809 | 010649 (7) | ref|XP_006348346.1| | 8e-87 | PREDICTED: fatty-acid-binding protein 3-like [Solanum tuberosum] | 756 | 010649 (7) | ref|XP_007212009.1| | 9e-115 | hypothetical protein PRUPE_ppa011189mg [Prunus persica] gb|EMJ13208.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
rJMSF017C13- ATTCTTGGTCTAAAAGAGAAACTTG
rJMSF043E17- TATTCTTGGTCTAAAAGAGAAACTTG
____________________________________________________________
consensus TATTCTTGGTCTAAAAGAGAAACTTG
. : . : . : . : . : . :
rJMSF017C13- AAGCAATATAATGTATTTTGACTACACAATGCTACAAAATTACTCAACAAAGCTGGAACC
rJMSF043E17- AAGCAATATAATGTATTTTGACTACACAATGCTACAAAATTACTCAACAAAGCTGGAACC
rJMSF040J07- ATGTATTTTGACTACACAATGCTACAAAATTACTCAACAAAGCTGGAACC
____________________________________________________________
consensus AAGCAATATAATGTATTTTGACTACACAATGCTACAAAATTACTCAACAAAGCTGGAACC
. : . : . : . : . : . :
rJMSF017C13- CAAAAAAGGCTACTCTGCAACTTAACACAGCATTCACTTGAGCACTACTTCCAATCCATT
rJMSF043E17- CAAAAAAGGCTACTCTGCAACTTAACACAGCATTCACTTGAGCACTACTTCCAATCCATT
rJMSF040J07- CAAAAAAGGCTACTCTGCAACTTAACACAGCATTCACTTGAGCACTACTTCCAATCCATT
____________________________________________________________
consensus CAAAAAAGGCTACTCTGCAACTTAACACAGCATTCACTTGAGCACTACTTCCAATCCATT
. : . : . : . : . : . :
rJMSF017C13- GGCAACTGATGCTTTCAAGGAAGGAGAAACTGGATTGCGTCCAAGAAATACATCAAACAG
rJMSF043E17- GGCAACTGATGCTTTCAAGGAAGGAGAAACTGGATTGCGTCCAAGAAATACATCAAACAG
rJMSF040J07- GGCAACTGATGCTTTCAAGGAAGGAGAAACTGGATTGCGTCCAAGAAATACATCAAACAG
____________________________________________________________
consensus GGCAACTGATGCTTTCAAGGAAGGAGAAACTGGATTGCGTCCAAGAAATACATCAAACAG
. : . : . : . : . : . :
rJMSF017C13- AGCTGAAGTAACGTTTGCCGATTCAATCTTAGCATCAATTGAGGAAGGCGTTGCATCAGA
rJMSF043E17- AGCTGAAGTAACGTTTGCCGATTCAATCTTAGCATCAATTGAGGAAGGCGTTGCATCAGA
rJMSF040J07- AGCTGAAGTAACGTTTGCCGATTCAATCTTAGCATCAATTGAGGAAGGCGTTGCATCAGA
____________________________________________________________
consensus AGCTGAAGTAACGTTTGCCGATTCAATCTTAGCATCAATTGAGGAAGGCGTTGCATCAGA
. : . : . : . : . : . :
rJMSF017C13- TGATACACAAACAAGCATTTTGGTTGGGTCAACCCAAGTTAACACTATGAAAGTTCCTTT
rJMSF043E17- TGATACACAAACAAGCATTTTGGTTGGGTCAACCCAAGTTAACACTATGAAAGTTCCTTT
rJMSF040J07- TGATACACAAACAAGCATTTTGGTTGGGTCAACCCAAGTTAACACTATGAAAGTTCCTTT
JMSF043E17+ ACCCAAGTTAACACTATGAAAGTTCCTTT
____________________________________________________________
consensus TGATACACAAACAAGCATTTTGGTTGGGTCAACCCAAGTTAACACTATGAAAGTTCCTTT
. : . : . : . : . : . :
rJMSF017C13- CTTAAGAGGTCTCCCTTGAAAGATGGTACGGAATGTGGAAAGGGCAGTTTCATCATCTGC
rJMSF043E17- CTTAAGAGGTCTCCCTTGAAAGATGGTACGGAATGTGGAAAGGGCAGTTTCATCATCTGC
rJMSF040J07- CTTAAGAGGTCTCCCTTGAAAGATGGTACGGAATGTGGAAAGGGCAGTTTCATCATCTGC
JMSF043E17+ CTTAAGAGGTCTCCCTTGAAAGATGGTACGGAATGTGGAAAGGGCAGTTTCATCATCTGC
____________________________________________________________
consensus CTTAAGAGGTCTCCCTTGAAAGATGGTACGGAATGTGGAAAGGGCAGTTTCATCATCTGC
. : . : . : . : . : . :
rJMSF017C13- AGAGGGCGATTTGATTCTTGGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
rJMSF043E17- AGAGGGCGATTTGATTCTTGGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
rJMSF040J07- AGAGGGCGATTTGATTCTTGGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
JMSF040J07+ GGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
JMSF043E17+ AGAGGGCGATTTGATTCTTGGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
____________________________________________________________
consensus AGAGGGCGATTTGATTCTTGGAGAGATAGCTTCATCTAACGCATCCCAGAAAGTTTTACC
. : . : . : . : . : . :
rJMSF017C13- ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
rJMSF043E17- ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
rJMSF040J07- ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
JMSF040J07+ ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
JMSF043E17+ ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
____________________________________________________________
consensus ATCAACATCTCTCACTAAAACGATGCTTAGAGATTTCTCCAGAGGAGCTTTAAATATGGT
. : . : . : . : . : . :
rJMSF017C13- CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
rJMSF043E17- CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
rJMSF040J07- CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
JMSF040J07+ CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
JMSF040I07+ CTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
JMSF043E17+ CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
____________________________________________________________
consensus CTCAAACAACGGGGAATCATTTTGTAGCTCAGCTGCTGAGCGTCCTCTCCAGGCATCTAA
. : . : . : . : . : . :
rJMSF017C13- CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
rJMSF043E17- CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
rJMSF040J07- CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
JMSF040J07+ CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
JMSF040I07+ CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
JMSF043E17+ CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
____________________________________________________________
consensus CTTATTGAGGATGGATTCATTGACATATAGTCCCGCAGCATAGACCTTAACACCTATTAT
. : . : . : . : . : . :
rJMSF017C13- TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
rJMSF043E17- TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
rJMSF040J07- TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
JMSF040J07+ TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
JMSF040I07+ TGCAAAAACTTTTTCCCNGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
JMSF043E17+ TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
____________________________________________________________
consensus TGCAAAAACTTTTTCCCTGTATCCAGTCCCAAGCAAAGATAAAGATGTGCAGCAACCGGG
. : . : . : . : . : . :
rJMSF017C13- GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
rJMSF043E17- GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
rJMSF040J07- GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
JMSF040J07+ GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
JMSF040I07+ GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
JMSF043E17+ GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
JMSF017C13+ T
____________________________________________________________
consensus GAGGCTCAATGATCTTTGGAACTTTACATTGGTTGTTGGTTCCTCTACATACTCTGCATT
. : . : . : . : . : . :
rJMSF017C13- TCC
rJMSF043E17- TCCNACAGAA
rJMSF040J07- TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
JMSF040J07+ TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
JMSF040I07+ TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
JMSF043E17+ TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
JMSF017C13+ TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
____________________________________________________________
consensus TCCAACAGAAGAAGATGAAGCAGCTCTGGGCGAGAATAGACCGGGAAGCCTAGCATCCAA
. : . : . : . : . : . :
rJMSF040J07- CGACCCTAATGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
JMSF040J07+ CGACCCTAATGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
JMSF040I07+ CGACCCTANTGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
JMSF043E17+ CGACCCTAATGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
JMSF017C13+ CGACCCTAATGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
____________________________________________________________
consensus CGACCCTAATGAGAAATGAGAAGGAAATGTGGAAAAGATAGTGAAATAACTGTGGGTTTT
. : . : . : . : . : . :
rJMSF040J07- GCTGAGAG
JMSF040J07+ GCTGAGAGGAAGAGAAAATCTGGGTTTGACATTGCAAGAAGTGATCTTTGATTTTGTAGG
JMSF040I07+ GNTGAGAGGAAGAGAAANTCTGGGTTTGACATNGCAAGAAGTGATCTNTGATTTNGTAGG
JMSF043E17+ GCTGAGAGGAAGAGAAAATCTGGGTTTGACATTGCAAGAAGTGATCTTTGATTTTGTAGG
JMSF017C13+ GCTGAGAGGAAGAGAAAATCTGGGTTTGACATTGCAAGAAGTGATCTTTGATTTTGTAGG
____________________________________________________________
consensus GCTGAGAGGAAGAGAAAATCTGGGTTTGACATTGCAAGAAGTGATCTTTGATTTTGTAGG
. : . : . : . : . : . :
JMSF040J07+ TGCTGAAACCGAAATCCACAGTGACGAAGGCATTGACCCAACTGCAGCCATGTTCTTGTT
JMSF040I07+ TGCTGAAACCGAAATCCACAGTGACGAAGGCATTGACCCAACTGCAGCCATGTTCTTGTT
JMSF043E17+ TGCTGAAACCGAAATCCACAGTGACGAAGGCATTGACCCAACTGCAGCCATGTTCTTGTT
JMSF017C13+ TGCTGAAACCGGAATCCACAGTGACGAAGGCATTGACCCAACTGCAGCCATGTCCTTGTT
____________________________________________________________
consensus TGCTGAAACCGAAATCCACAGTGACGAAGGCATTGACCCAACTGCAGCCATGTTCTTGTT
. : . : . : . : . : . :
JMSF040J07+ CTCAAGTGAGGAGGGTAACAGAAAGGCGAATTCCCCTAGGCCTAGTAGTATTAAGTACGG
JMSF040I07+ CTCAAGTGAGGAGGGTAACAGAAAGGCGAATTCCCCTAGGCCTAGTAGTATTAAGTACGG
JMSF043E17+ CTCAAGTGAGGAGGGTAACAGAAAGGCGAATTCCCCTAGGCCTAGTAGTATTAAGTACGG
JMSF017C13+ CTCAAGTGAGGAGGGTAACAGAAAGGCGAATTCCCCTAGGCCTAGTAGTATTAAGTACGG
____________________________________________________________
consensus CTCAAGTGAGGAGGGTAACAGAAAGGCGAATTCCCCTAGGCCTAGTAGTATTAAGTACGG
. : . : . : . : . : . :
JMSF040J07+ AGTATCATTTTTCCTTCC
JMSF040I07+ AGTATCATTTTTCCTTCC
JMSF043E17+ AGTATCATTTTTCCTTCCATTTTCCTCTAATTTTTTTCCTTGGCCCTTTATCTCTGAATC
JMSF017C13+ AGTATCATTTTTCCTTCCATTTTCCTCTAATTTTTTTCCTTGGCCCTTTATCTCTGAATC
____________________________________________________________
consensus AGTATCATTTTTCCTTCCATTTTCCTCTAATTTTTTTCCTTGGCCCTTTATCTCTGAATC