Contig 010646:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016E16Sequence539010646 (4)gb|AAV88074.1|2e-41sucrose transporter-like protein [Ipomoea batatas]744000337 (5)gb|EYU28727.1|1e-77hypothetical protein MIMGU_mgv1a006020mg [Erythranthe guttata]
JMFF024L17Sequence547010646 (4)gb|AAV88074.1|1e-40sucrose transporter-like protein [Ipomoea batatas]231000337 (5)
JMFF046N22Sequence475010646 (4)gb|AAV88074.1|2e-42sucrose transporter-like protein [Ipomoea batatas]395000337 (5)
JMSF016P16Sequence460010646 (4)gb|AAV88074.1|4e-19sucrose transporter-like protein [Ipomoea batatas]781000337 (5)ref|XP_010256873.1|6e-74PREDICTED: sucrose transport protein SUC3 isoform X3 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF046N22+ TGTAATCGGACCGCATAG
JMFF016E16+ TAG
JMFF024L17+ TAG
                      ____________________________________________________________
consensus TGTAATCGGACCGCATAG
 
. : . : . : . : . : . :
JMFF046N22+ CCAAATAAATGAAGAAAAAGCGTGTGGTATTCCAAGAGTCTGAATATAAGGAGTGAGGAG
JMFF016E16+ CCAAATAAATGAAGAAAAAGCGTGTGGTATTCCAAGAGTCTGAATATAAGGAGTGAGGAG
JMFF024L17+ CCAAATAAATGAAGAAAAAGCGTGTGGTATTCCAAGAGTCTGAATATAAGGAGTGAGGAG
                      ____________________________________________________________
consensus CCAAATAAATGAAGAAAAAGCGTGTGGTATTCCAAGAGTCTGAATATAAGGAGTGAGGAG
 
. : . : . : . : . : . :
JMFF046N22+ AGAGAGTTGCAATGCCCAGCCAAACTGGACGCCGGCGGCGACCGTACAACTGAGGATCAA
JMFF016E16+ AGAGAGTTGCAATGCCCAGCCAAACTGGACGCCGGCGGCGACCGTACAACTGAGGATCAA
JMFF024L17+ AGAGAGTTGCAATGCCCAGCCAAANTGGACGCCGGCGGCGACCGTACAACTGAGGATCAA
                      ____________________________________________________________
consensus AGAGAGTTGCAATGCCCAGCCAAACTGGACGCCGGCGGCGACCGTACAACTGAGGATCAA
 
. : . : . : . : . : . :
JMFF046N22+ GGTGAGCAGGCTGATCTGAACAGGCGACTGATGGTGACTAGAATCCGTGGAGTCGCCATT
JMFF016E16+ GGTGAGCAGGCTGATCTGAACAGGCGNCTGATGGTGACTAGAATCCGTGGAGTCGCCATT
JMFF024L17+ GGTGAGCAGGCTGATCTGAACAGGCGACTGATGGTGANTAGAATCCGTGGAGTCGCCATT
JMSF016P16+ CAGGCGACTGATGGTGACTAGAATCCGTGGAGTCGCCATT
                      ____________________________________________________________
consensus GGTGAGCAGGCTGATCTGAACAGGCGACTGATGGTGACTAGAATCCGTGGAGTCGCCATT
 
. : . : . : . : . : . :
JMFF046N22+ GGAAACCCTATGAGGTGAAAACGCCGAATCGGCCTGTGACCGACGCTGATGAAGCTCCTC
JMFF016E16+ GGAAACCCTATGAGGTGAAAACGCCGAATCGGCCTGTGACCGACGCTGATGAAGCTCCTC
JMFF024L17+ GGAAACCCTATGAGGTGAAAACGCCGAATCGGCCTGTGACCGACGCTGATGAAGCTCCTC
JMSF016P16+ GGAAACCCTATGAGGTGAAAACGCCGAATCGGCCTGTGACCGACGCTGATGAAGCTCCTC
                      ____________________________________________________________
consensus GGAAACCCTATGAGGTGAAAACGCCGAATCGGCCTGTGACCGACGCTGATGAAGCTCCTC
 
. : . : . : . : . : . :
JMFF046N22+ CGCCCCTGCCAACTCCACCTCCTGCTTTAAATTCAAGTACGGCACCTTGATTGACACCAC
JMFF016E16+ CGCCCCTGCCAACTCCACCTCCTGCTTTAAATTCAAGTACGGCACCTTGATTGACACCAC
JMFF024L17+ CGCCCCTGCCAACTCCACCTCCTGCTTTAAATTCAAGTACGGCACCTTGATTGACACCAC
JMSF016P16+ CGCCCCTGCCAACTCCACCTCCTGCTCTAAATTCAAGTACGGCACCTTGATTGACACCAC
                      ____________________________________________________________
consensus CGCCCCTGCCAACTCCACCTCCTGCTTTAAATTCAAGTACGGCACCTTGATTGACACCAC
 
. : . : . : . : . : . :
JMFF046N22+ CTCCATCATCTTCGCCTCCTTCCCACCTCCCCTTCCACTGATCCACTCAATTCACGCCCA
JMFF016E16+ CTCCATCATCTTCGCCTCCTTCCCACCTCCCCTTCCACTGATCCACTCAATTCACGCCCA
JMFF024L17+ CTCCATCATCTTCGCCTCCTTCCCACCTCCCCTTCCACTGATCCACTCAATTCACGCCCA
JMSF016P16+ CTCCATCATCTTCGCCTCCTTCCCACCTCCCCTTCCACTGATCCACTCAATTCACGCCCA
                      ____________________________________________________________
consensus CTCCATCATCTTCGCCTCCTTCCCACCTCCCCTTCCACTGATCCACTCAATTCACGCCCA
 
. : . : . : . : . : . :
JMFF046N22+ ATTTTTTCACATCCAAATGTCCAAAGCTCTAAATCATCTGAATGCCGACGAGTGATTTTG
JMFF016E16+ ACTTTTTCACATCCAAATGTCCAAAGCTCTAAATCATCTGAATGCCGACGAGTGATTTTG
JMFF024L17+ ATTTTTTCACATCCAAATGTCCAAAGCTCTAAATCATCTGAATGCCGACGAGTGATTTTG
JMSF016P16+ ATTTTTTCACATCCAAATGTCCAAAGCTCTAAATCATCTGAATGACGACGAGTGATTTTG
                      ____________________________________________________________
consensus ATTTTTTCACATCCAAATGTCCAAAGCTCTAAATCATCTGAATGCCGACGAGTGATTTTG
 
. : . : . : . : . : . :
JMFF046N22+ ACTCGTGCAAATCTAAATTGAATCCGATTCAAAC
JMFF016E16+ ACTCGTGCAAATCTAAATTGAATCCGATTCAAACGAATTGATTGATTATCCAAATGGGTG
JMFF024L17+ ACTCGTGCAAATCTAAATTGAATCCGATTCAAACGAATTGATTGATTATCCAAATGGGTG
JMSF016P16+ ACTCGTGCAAATCTAAATTGAATCCGATTCAAACGAATTGATTGATTATCCAAATGGGTG
                      ____________________________________________________________
consensus ACTCGTGCAAATCTAAATTGAATCCGATTCAAACGAATTGATTGATTATCCAAATGGGTG
 
. : . : . : . : . : . :
JMFF016E16+ CAATTAAGAGAGAAGAGATGAAGATTCACAGATCAAAATTTGGGCGCGCTTT
JMFF024L17+ CAATTAAGAGAGAAGAGATGAAGATTCACAGATCAAAATTTGGGCGCGCTTTTGTGTGAT
JMSF016P16+ CAATTAAGAGAGAAGAGATGAAGATTCACAGATCAAAATTTGGGCGCGCTTTTGTGTGAT
                      ____________________________________________________________
consensus CAATTAAGAGAGAAGAGATGAAGATTCACAGATCAAAATTTGGGCGCGCTTTTGTGTGAT
 
. : . : . : . : . : . :
JMFF024L17+ TC
JMSF016P16+ TCTCCCTGTCGGGTTTCTTGAGGGTATTCCTTCAGATACAGCGCATCGCCATTGACGCCA
                      ____________________________________________________________
consensus TCTCCCTGTCGGGTTTCTTGAGGGTATTCCTTCAGATACAGCGCATCGCCATTGACGCCA