Contig 010642:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051H02+           TGTGGCCATGCCGATGAAGATATTCCAAAGCCTTGAGCGTTTCTTTAAGTATAGAACAAA
                      ____________________________________________________________
consensus             TGTGGCCATGCCGATGAAGATATTCCAAAGCCTTGAGCGTTTCTTTAAGTATAGAACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051H02+           TAGCAGACTCTTCAAATCCTTCTGGGTATGCTATCTTCATGAGGTGCAGACAAGAACCTT
                      ____________________________________________________________
consensus             TAGCAGACTCTTCAAATCCTTCTGGGTATGCTATCTTCATGAGGTGCAGACAAGAACCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+                            ACCACCCAAAGGTAGCTACCAACAACAAATGAGCAAAATGCTC
JMFF051H02+           CGGCCATAAAGGGCATAACCACCCAAAGGTAGCTACCAACAACAAATGAGCAAAATGCTC
                      ____________________________________________________________
consensus             CGGCCATAAAGGGCATAACCACCCAAAGGTAGCTACCAACAACAAATGAGCAAAATGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           TAATGACATTGGGATGATGAATTAAACTCATTGTTTGGGCTTCCCTGCGTATGTCATCCA
JMFF051H02+           TAATGACATTGGGATGATGAATTAAACTCATTGTTTGGGCTTCCCTGCGTATGTCATCCA
                      ____________________________________________________________
consensus             TAATGACATTGGGATGATGAATTAAACTCATTGTTTGGGCTTCCCTGCGTATGTCATCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           GATTGCTGTTACAGCGATCGAGATCCAAACACTTGACGGCGATAACATCATTGAGAGGGA
JMFF051H02+           GATTGCTGTTACAGCGATCGAGATCCAAACACTTGACGGCGATAACATCATTGAGAGGGA
                      ____________________________________________________________
consensus             GATTGCTGTTACAGCGATCGAGATCCAAACACTTGACGGCGATAACATCATTGAGAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           GATAGATCGCTCTGTAGACAGTAGCGCTGGCGCCATAACCGACCTCTTCTAGAAGCTTGT
JMFF051H02+           GATAGATCGCTCTGTAGACAGTAGCGCTGGCGCCATAACCGACCTCTTCTAGAAGCTTGT
                      ____________________________________________________________
consensus             GATAGATCGCTCTGTAGACAGTAGCGCTGGCGCCATAACCGACCTCTTCTAGAAGCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           AGTCATCCGGATTCAGCGAGTAACTCTTCTGACCGGAGGCCATGCTCCTCCTCCTCCTCC
JMFF051H02+           AGTCATCCGGATTCAGCGAGTAACTCTTCTGACCGGAGGCCATGCTCCTCCTCCTCCTCC
                      ____________________________________________________________
consensus             AGTCATCCGGATTCAGCGAGTAACTCTTCTGACCGGAGGCCATGCTCCTCCTCCTCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           TCCGCCGCCGCCGGAAAAGGAAAAAAACAAACCGTCGATCGGAAAACCACCTGAAAAAAC
JMFF051H02+           TCCGCCGCCGCCGGAAAAGGAAAAAAACAAACCGTCGATCGGAAAACCACCTGAAAAAAC
JMSF016G20+           TCCGCCGCCGCCGGAAAAGGAAAAAAACAAACCGTCGATCGGAAAACCACCTGAAAAAAC
                      ____________________________________________________________
consensus             TCCGCCGCCGCCGGAAAAGGAAAAAAACAAACCGTCGATCGGAAAACCACCTGAAAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C14+           TTCAAGCAATTGACAGAAATGTCCGTGTAATCTGCAGGTA                    
JMFF051H02+           TTCAAGCAATTGACAGAAATGTCCGTGTAATCTGCAGGTATAAGATTCAGATAGAGATGG
JMSF016G20+           TTCAAGCAATTGACAGAAATGTCCGTGTAATCTGCAGGTATAAGATTCAGATAGAGATGG
                      ____________________________________________________________
consensus             TTCAAGCAATTGACAGAAATGTCCGTGTAATCTGCAGGTATAAGATTCAGATAGAGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051H02+           ATAGATGGATATATGGACCCGAAGAAGAAGAAAAGCTAAGCTGTATTACTAAGCTCCGAA
JMSF016G20+           ATAGATGGATATATGGACCCGAAGAAGAAGAAAAGCTAAGCTGTATTACTAAGCTCCGAA
                      ____________________________________________________________
consensus             ATAGATGGATATATGGACCCGAAGAAGAAGAAAAGCTAAGCTGTATTACTAAGCTCCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051H02+           TTATTAGCGATATAATTT                                          
JMSF016G20+           TTATTAGCGATATTATTTAGAATTTTCTTTTGTTTTCCTCATAGTGATTTCCAATCTCTC
                      ____________________________________________________________
consensus             TTATTAGCGATATTATTTAGAATTTTCTTTTGTTTTCCTCATAGTGATTTCCAATCTCTC