Contig 010640:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037P17Sequence585010640 (2)ref|XP_004243384.1|8e-28PREDICTED: NAC domain-containing protein 8 [Solanum lycopersicum]717004079 (2)ref|XP_009587632.1|83.6PREDICTED: NAC domain-containing protein 8-like [Nicotiana tomentosiformis]
JMSF016C14Sequence357010640 (2)714004079 (2)ref|XP_011047704.1|197PREDICTED: NAC domain-containing protein 8-like [Populus euphratica]

Alignment

This contig is upended


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JMFF037P17+                                   TGTGGATGAACTCGTCAATTAAAGGATGAAGCTTGT
                      ____________________________________________________________
consensus                                     TGTGGATGAACTCGTCAATTAAAGGATGAAGCTTGT
 
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JMFF037P17+           GAGAATCCAAGCTGACCTTAGCCTCCAAATGTTCAAGAATCTCTTGATCACTTGGATCAA
                      ____________________________________________________________
consensus             GAGAATCCAAGCTGACCTTAGCCTCCAAATGTTCAAGAATCTCTTGATCACTTGGATCAA
 
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JMFF037P17+           ACTTCACTCCAGCAGGCAACCCCGGCAGATTATGAATTCCAGCCTTTTGCTCACACTTGA
                      ____________________________________________________________
consensus             ACTTCACTCCAGCAGGCAACCCCGGCAGATTATGAATTCCAGCCTTTTGCTCACACTTGA
 
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JMFF037P17+           TCGGATGGCCACAGGAAGGACAAGCCCTCATTCCGCTACGTCTGGTAATCTCATTTATGG
                      ____________________________________________________________
consensus             TCGGATGGCCACAGGAAGGACAAGCCCTCATTCCGCTACGTCTGGTAATCTCATTTATGG
 
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JMFF037P17+           TCACAGAATTATTATTATTATTACCGCCACTGTTCTGAGCAAACAATCTTGCTGGACGAT
                      ____________________________________________________________
consensus             TCACAGAATTATTATTATTATTACCGCCACTGTTCTGAGCAAACAATCTTGCTGGACGAT
 
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JMFF037P17+           CCTCCCCAGAATCACTGCTGCAAGTCATTGTTTTTATTTGTCTGCTAAGAAAACATTACT
JMSF016C14+              CCCCAGAATCACTGCTGCAAGTCATTGTTTTTATTTGTCTGCTAAGAAAACATTACT
                      ____________________________________________________________
consensus             CCTCCCCAGAATCACTGCTGCAAGTCATTGTTTTTATTTGTCTGCTAAGAAAACATTACT
 
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JMFF037P17+           CGATCGTACGTTGTCGTCGCCACTATTCCCAAATAAACAAGCTCCCAGGAGGACTACTAC
JMSF016C14+           CGATCGTACGTGGTCGTCGCCACTATTCCCAAATAAACAAGCTCCCAGGAGGACTACTAC
                      ____________________________________________________________
consensus             CGATCGTACGTTGTCGTCGCCACTATTCCCAAATAAACAAGCTCCCAGGAGGACTACTAC
 
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JMFF037P17+           TACTCATAAGCTAGGTCATATGAAAAGGGAAAAAGCAAGTTGTCTCTTTGAAAGCATGTT
JMSF016C14+           TACTCATAAGCTAGGTCATATGAAAAGGGAAAAAGCAAGTTGTCTCTTTGAAAGCATGTT
                      ____________________________________________________________
consensus             TACTCATAAGCTAGGTCATATGAAAAGGGAAAAAGCAAGTTGTCTCTTTGAAAGCATGTT
 
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JMFF037P17+           CTCCCTCAAGCTACTTGTTCTTGAGGGTTGGGAAGGTATAGAATTCTGCTTTTTTCCCCT
JMSF016C14+           CTCCCTCAAGCTACTTGTTCTTGAGGGTTGGGAAGGTATAGAATTCTGCTTTTTTCCCCT
                      ____________________________________________________________
consensus             CTCCCTCAAGCTACTTGTTCTTGAGGGTTGGGAAGGTATAGAATTCTGCTTTTTTCCCCT
 
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JMFF037P17+           CACTTTTTAGGCCATGGTAGATTCAAGCACAAGAGTGGTCTCGGTCTCTCAATTCAATTC
JMSF016C14+           CACTTTTTAGGCCATGGTAGATTCAAGCACAAGAGTGGTCTCGGTCTCTCAATTCAATTC
                      ____________________________________________________________
consensus             CACTTTTTAGGCCATGGTAGATTCAAGCACAAGAGTGGTCTCGGTCTCTCAATTCAATTC
 
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JMFF037P17+           ATCATCAAT                                                   
JMSF016C14+           ATCATCAATAACACTCATCACTACTTGTGCACAGATAGATAGAGAGAGAGAGGGGGGCAC
                      ____________________________________________________________
consensus             ATCATCAATAACACTCATCACTACTTGTGCACAGATAGATAGAGAGAGAGAGGGGGGCAC