Contig 010639:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016B17Sequence225010639 (2)710007097 (2)ref|XP_009593761.1|1e-47PREDICTED: probable WRKY transcription factor 65 isoform X1 [Nicotiana tomentos
JMSF020F01Sequence690010639 (2)ref|XP_009802037.1|8e-62PREDICTED: probable WRKY transcription factor 69 isoform X2 [Nicotiana sylvestr564007097 (2)ref|XP_010323673.1|1e-22PREDICTED: probable WRKY transcription factor 69 isoform X3 [Solanum lycopersic

Alignment

This contig is upended


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JMSF020F01+                                                GGCGGAAGTGGTGGTGGTAGCGG
                      ____________________________________________________________
consensus                                                  GGCGGAAGTGGTGGTGGTAGCGG
 
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JMSF020F01+           CGGCGGCGGCGGCGTAATGGTGGTGGGTTTTGGTGGGGAGAGGGTGGTTGTGGTCAGAGG
                      ____________________________________________________________
consensus             CGGCGGCGGCGGCGTAATGGTGGTGGGTTTTGGTGGGGAGAGGGTGGTTGTGGTCAGAGG
 
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JMSF020F01+           AGTAGGTGATGAGGAGCATGGTGGGGTCCAGGCGGCTACGTTCAACTTGTTTCCTAGCTG
                      ____________________________________________________________
consensus             AGTAGGTGATGAGGAGCATGGTGGGGTCCAGGCGGCTACGTTCAACTTGTTTCCTAGCTG
 
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JMSF020F01+           GACATCCTTTTGAGCTGCTACATCGATAATATCCCCTGGGATAAGGGGAGCCTTTAATGG
                      ____________________________________________________________
consensus             GACATCCTTTTGAGCTGCTACATCGATAATATCCCCTGGGATAAGGGGAGCCTTTAATGG
 
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JMSF020F01+           GTTTTTGGCCGTACTTCCGCCACGACCAAGAATCCGGCGGAGGATAAACCTCCGATTTAC
                      ____________________________________________________________
consensus             GTTTTTGGCCGTACTTCCGCCACGACCAAGAATCCGGCGGAGGATAAACCTCCGATTTAC
 
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JMSF020F01+           TCCGTGATCCGTCGCCGTCGCCGGCCGGCATGGAAACCACCCTCTTCTGTGCGCCTCTCC
                      ____________________________________________________________
consensus             TCCGTGATCCGTCGCCGTCGCCGGCCGGCATGGAAACCACCCTCTTCTGTGCGCCTCTCC
 
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JMSF020F01+           TTTTCCTAGGAGACGGGGTGCTAACTTCCGCCGCTTCATCGCCGGACAACGGCGACTCAA
                      ____________________________________________________________
consensus             TTTTCCTAGGAGACGGGGTGCTAACTTCCGCCGCTTCATCGCCGGACAACGGCGACTCAA
 
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JMSF020F01+           CACCATTCTCCGGCGGCGGCGTCCCGGCCGAGAGCTCTTCTTGCTTCTGGTGAAGCCTGG
                      ____________________________________________________________
consensus             CACCATTCTCCGGCGGCGGCGTCCCGGCCGAGAGCTCTTCTTGCTTCTGGTGAAGCCTGG
 
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JMSF020F01+           TCTCCATCATGATATAAAAACCCTACTGAAATATGAGCCAACTCACTCGCAAATTGTAAC
                      ____________________________________________________________
consensus             TCTCCATCATGATATAAAAACCCTACTGAAATATGAGCCAACTCACTCGCAAATTGTAAC
 
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JMSF020F01+           CCCGGGCCCTTATCTATCCTTTCATGGCGATAGAAGACGTAAAAGGGTGCCGGATCTAGC
JMSF016B17+                          ATCCTTTCATGGCGATAGAAGACGTAAAAGGGTGCCGGATCTAGC
                      ____________________________________________________________
consensus             CCCGGGCCCTTATCTATCCTTTCATGGCGATAGAAGACGTAAAAGGGTGCCGGATCTAGC
 
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JMSF020F01+           TTGCTGTATATGCTGCCGGAAAAAGTGGCGGAGAGGGTCGCCGGAGTGAGTTGCTGTGGG
JMSF016B17+           TTGCTGTATATGCTGCCGGAAAAAGTGGCGGAGAGGGTCGCCGGAGTGAGTTGCTGTGGG
                      ____________________________________________________________
consensus             TTGCTGTATATGCTGCCGGAAAAAGTGGCGGAGAGGGTCGCCGGAGTGAGTTGCTGTGGG
 
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JMSF020F01+           GTGGGGGAGTGGGGGGAGGTGGTGGAGTTTTGATGGCTTTTAGGTTTTAATATTGGAGTT
JMSF016B17+           GTGGGGGAGTGGGGGGAGGTGGTGGAGTTTTGATGGCTTTTAGGTTTTAATATTGGAGTT
                      ____________________________________________________________
consensus             GTGGGGGAGTGGGGGGAGGTGGTGGAGTTTTGATGGCTTTTAGGTTTTAATATTGGAGTT
 
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JMSF020F01+           GGACA                                                       
JMSF016B17+           GGACATGTTGACAGACTGGCAAAAATGCGTAGTTTATTATGGACGTGCGAGCAATTCACC
                      ____________________________________________________________
consensus             GGACATGTTGACAGACTGGCAAAAATGCGTAGTTTATTATGGACGTGCGAGCAATTCACC