Contig 010638:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D08Sequence363010638 (8)731012463 (10)gb|KJB69528.1|2e-89hypothetical protein B456_011G028300 [Gossypium raimondii]
JMFF026P24Sequence498010638 (8)735012463 (10)gb|KJB69528.1|3e-89hypothetical protein B456_011G028300 [Gossypium raimondii]
JMFF029H22Sequence501010638 (8)730012463 (10)gb|KJB69528.1|2e-89hypothetical protein B456_011G028300 [Gossypium raimondii]
JMFF041C22Sequence634010638 (8)ref|XP_006347030.1|4e-04PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Solanum tuberos619012463 (10)ref|XP_008383730.1|6e-21PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
JMFF042G06Sequence648010638 (8)ref|XP_009595039.1|2e-06PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tomentosiformis]597012463 (10)ref|XP_010647093.1|5e-51PREDICTED: serine/threonine-protein kinase HT1 [Vitis vinifera] emb|CAN83589.1|
JMFF046O21Sequence644010638 (8)ref|XP_009595039.1|2e-06PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tomentosiformis]544012463 (10)gb|KJB69528.1|0.001hypothetical protein B456_011G028300 [Gossypium raimondii]
JMFF048I01Sequence492010638 (8)574012463 (10)
JMSF016A21Sequence445010638 (8)753012463 (10)gb|KJB69528.1|9e-86hypothetical protein B456_011G028300 [Gossypium raimondii]

Alignment

This contig is upended


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JMFF046O21+                      CTGGACAATGATAGGAAGGGAGGTCAACCTTGCTGCTTCTAACCTATGA
JMFF042G06+                     GCTGGACAATGATAGGAAGGGAGGTCAACCTTGCTGCTTCTAACCTATGA
JMFF041C22+                                     AAGGGAGGTCAACCTNGCTGCTTCTAACCTATGA
                      ____________________________________________________________
consensus                       GCTGGACAATGATAGGAAGGGAGGTCAACCTTGCTGCTTCTAACCTATGA
 
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JMFF046O21+           TAAACAGTGTGAGAGAATTTTGTTCTCCTAATCCAAGATACCTCTTCATCCATCTTTCCA
JMFF042G06+           TAAACAGTGTGAGAGAATTTTGTTCTCCTAATCCAAGATACCTCTTCATCCATCTTTCCA
JMFF041C22+           TAAACAGTGTGAGAGAATTTTGTTCTCCTAATCCAAGATACCTCTTCATCCATCTTTCCA
                      ____________________________________________________________
consensus             TAAACAGTGTGAGAGAATTTTGTTCTCCTAATCCAAGATACCTCTTCATCCATCTTTCCA
 
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JMFF046O21+           CCTACTAAAACACCAGGTAACTACCTCAATCTGTTTCAACTAAGAAGAAGGTTCAGATTC
JMFF048I01+                                                      GAAGAAGGTTCAGATTC
JMFF042G06+           CCTACTAAAACACCAGGTAACTACCTCAATCTGTTTCAACTAAGAAGAAGGTTCAGATTC
JMFF026P24+                                                   TAAGAAGAAGGTTCAGATTC
JMFF029H22+                                                   TAAGAAGAAGGTTCAGATTC
JMFF041C22+           CCTACTAAAACACCAGGTAACTACCTCAATCTGTTTCAACTAAGAAGAAGGTTCAGATTC
                      ____________________________________________________________
consensus             CCTACTAAAACACCAGGTAACTACCTCAATCTGTTTCAACTAAGAAGAAGGTTCAGATTC
 
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JMFF046O21+           AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF005D08+                     TTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF048I01+           AACAATCCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF042G06+           AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF026P24+           AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF029H22+           AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMFF041C22+           AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
JMSF016A21+                                              GTCTGTACTCCCATACACAAACATT
                      ____________________________________________________________
consensus             AACAATTCCCTTCAGAAGCCCAAGAAGGAAAAGATGTCTGTACTCCCATACACAAACATT
 
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JMFF046O21+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMFF005D08+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMFF048I01+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMFF042G06+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMFF026P24+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMFF029H22+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCNTGCAAGAATC
JMFF041C22+           CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
JMSF016A21+           NTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
                      ____________________________________________________________
consensus             CTCCAGACCCATCAAAGTTTAAGGATGAAGAAACATTCAACCTTTTGGCCTGCAAGAATC
 
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JMFF046O21+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF005D08+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF048I01+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF042G06+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF026P24+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF029H22+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMFF041C22+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
JMSF016A21+           CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
                      ____________________________________________________________
consensus             CTTCAAACTACACACTAAACCACCATAGACTTATTCTTGAATCACCAACTAAAGCAGAGA
 
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JMFF046O21+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF005D08+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF048I01+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF042G06+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF026P24+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF029H22+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMFF041C22+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
JMSF016A21+           GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
                      ____________________________________________________________
consensus             GCTCCTAAATCTATCCCTACTTGCCAAAAGATCAAAACTTTACTCTCAAACCAATCCATA
 
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JMFF046O21+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF005D08+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF048I01+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF042G06+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF026P24+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF029H22+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMFF041C22+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
JMSF016A21+           CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
                      ____________________________________________________________
consensus             CCTACCAAGAACAACCTCCATGACCATAAAAGTGGGAGCTATAACTAACAATATGACCTC
 
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JMFF046O21+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF005D08+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF048I01+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF042G06+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF026P24+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF029H22+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMFF041C22+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
JMSF016A21+           AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
                      ____________________________________________________________
consensus             AAACAGCAGAAGCAAGAAGGCTCTCTTTCAGCTTCAAAGTCAAACACCACCACCACCTTC
 
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JMFF046O21+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMFF005D08+           CTTTGAAGCCGTA                                               
JMFF048I01+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMFF042G06+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMFF026P24+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMFF029H22+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMFF041C22+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
JMSF016A21+           CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
                      ____________________________________________________________
consensus             CTTTGAAGCCGTAAGCATACATTTCCCCCTAATACTAAACTCCCTCGTTCTTCAAAAGAT
 
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JMFF046O21+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTC     
JMFF048I01+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTC     
JMFF042G06+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTC   
JMFF026P24+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTC   
JMFF029H22+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTC   
JMFF041C22+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTC   
JMSF016A21+           TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTCTCC
                      ____________________________________________________________
consensus             TCTCCGGGAAAACCCCCATCTTTGACGCGAATGCTCCCTTTCTTTTCTCTCTCTCTCTCC