Contig 010635:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039L07Sequence485010635 (5)gb|AGL34964.1|1e-14ethylene-responsive transcription factor 5 [Hevea brasiliensis]727018051gb|ADP37421.1|2e-07ethylene-responsive-element-binding factor 6 [Petunia x hybrida]
JMSF015C14Sequence356010635 (5)dbj|BAD99476.1|2e-24class II ethylene responsive element binding factor-like protein [Nicotiana ben687010635 (5)gb|ADP37421.1|6e-06ethylene-responsive-element-binding factor 6 [Petunia x hybrida]
JMSF026J23Sequence667010635 (5)ref|XP_009622637.1|3e-32PREDICTED: ethylene-responsive transcription factor 4 [Nicotiana tomentosiformi544010635 (5)

Alignment

This contig is upended


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rJMSF026J23-                                                       ATTTAAAGTATTCAC
                      ____________________________________________________________
consensus                                                          ATTTAAAGTATTCAC
 
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rJMSF026J23-          ATGGATCGGCGGTCATTCATGGATCGCCGGAATCACTCGCCGTTATCCTATATCCTACCA
rJMSF015C14-                     GTCATTCATGGATCGCCGGAATCACTCGCCGTTATCCTATATCCTACCA
                      ____________________________________________________________
consensus             ATGGATCGGCGGTCATTCATGGATCGCCGGAATCACTCGCCGTTATCCTATATCCTACCA
 
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rJMSF026J23-          CCTCTTTTTTGTTTTTTCCTTTTTTTGGTTTAATGAAAAAGGAAATTACACCTAAAATTA
rJMSF015C14-          CCTCTTTTTTGTTTTTTCCTTTTTTTGGTTTAATGAAAAAGGAAATTACACCTAAAATTA
                      ____________________________________________________________
consensus             CCTCTTTTTTGTTTTTTCCTTTTTTTGGTTTAATGAAAAAGGAAATTACACCTAAAATTA
 
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rJMSF026J23-          ACCAAAAAAAAAACAAAAAACAAAAAACAAAAAAGATTTTTGANAGATTGGAGTTGANAA
rJMSF015C14-          ACCAAAAAAAAAACAAAAAACAAAAAACAAAAAAGATTTTTGANAGATTGGAGTTGANAA
                      ____________________________________________________________
consensus             ACCAAAAAAAAAACAAAAAACAAAAAACAAAAAAGATTTTTGANAGATTGGAGTTGANAA
 
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rJMSF026J23-          TATCAAANAGCGCCGGTTCCNANACTCTCAGGCGGNGGGTGGTTGANATCGAAATTGTTA
rJMSF015C14-          TATCAAANAGCGCCGGTTCCNANACTCTCAGGCGGNGGGTGGTTGANATCGAAATTGTTA
                      ____________________________________________________________
consensus             TATCAAANAGCGCCGGTTCCNANACTCTCAGGCGGNGGGTGGTTGANATCGAAATTGTTA
 
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rJMSF026J23-          ATGGGCCCAACCTTTCGCGGTTCGCGATAGCCGACGTTCAAGTCAATGACCGATGAANAG
rJMSF015C14-          ATGGGCCCAACCTTTCGCGGTTCGCGATAGCCGACGTTCAAGTCAATGACCGATGAANAG
                      ____________________________________________________________
consensus             ATGGGCCCAACCTTTCGCGGTTCGCGATAGCCGACGTTCAAGTCAATGACCGATGAANAG
 
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rJMSF026J23-          TCGGACTCGCTGTGGTCCCCGAAGTTGGCGTTGGTGGCGAAAAAATTGAGGGTCTCGGCT
rJMSF015C14-          TCGGACTCGCTGTGGTCCCCGAAGTTGGCGTTGGTGGCGAAAAAATTGAGGGTCTCGGCT
                      ____________________________________________________________
consensus             TCGGACTCGCTGTGGTCCCCGAAGTTGGCGTTGGTGGCGAAAAAATTGAGGGTCTCGGCT
 
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rJMSF026J23-          TGGCGGTTGANAGGAGGGTTCACCGCCACGGCACGGGCAAGCGCGTTGAGATAAACTAAC
rJMSF015C14-          TGGCGGTTGANAGGAGGGTTCACCGCCACGGCACGGGCAAGCGCGTTGAGATAAACTAAC
JMSF026J23+                                                                AACTAAC
                      ____________________________________________________________
consensus             TGGCGGTTGANAGGAGGGTTCACCGCCACGGCACGGGCAAGCGCGTTGAGATAAACTAAC
 
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rJMSF026J23-          TGGCTGACGGGATANACGCCAGCCGGGTACGCGCCGGGGACCATGTGAGGAACGACNCGG
rJMSF015C14-          TGGCTGACGGGATANACNCCAGCCGGGTACGCGCCGGGGACCATGTGAGGAACGACNCGG
JMSF026J23+           TGGCTGACGGGATAGACGCCAGCCGGGTACGCGCCGGGGACCATGTGAGGAACGACGCGG
                      ____________________________________________________________
consensus             TGGCTGACGGGATAGACGCCAGCCGGGTACGCGCCGGGGACCATGTGAGGAACGACGCGG
 
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rJMSF026J23-          TGGGGGTTCGGTATCGGAAACATCACCGGTGCACGGCCGCCGAGGCTTA           
rJMSF015C14-          TGGGGGTT-GGTATCGGAAACATCACCGGTGCACGGCCGCCGAGGCTTAAATCCAGAGGC
JMSF026J23+           TGGGGGTTCGGTATCGGAAACATCACCGGTGCACGGCCGCCGAGGCTTAGATCCAGAGGC
                      ____________________________________________________________
consensus             TGGGGGTTCGGTATCGGAAACATCACCGGTGCACGGCCGCCGAGGCTTAGATCCAGAGGC
 
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rJMSF015C14-          GACGAGTCCGCCATCACGGCGGGCGAGATACGACCGCCCCCGCCGCCGTCGCGGCTCGAC
JMSF026J23+           GACGAGTCCGCCATCACGGCGGGCGAGATACGACCGCCCCCGCCGCCGTCGCGGCTCGAC
                      ____________________________________________________________
consensus             GACGAGTCCGCCATCACGGCGGGCGAGATACGACCGCCCCCGCCGCCGTCGCGGCTCGAC
 
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rJMSF015C14-          GACTCAACAGTGCTGCTCGGGCTAGGACTCTGTCCGTTTCCGCCGGCGTTCTTCTCACAA
JMSF026J23+           GACTCAACAGTGCTGCTCGGGCTAGGACTCTGTCCGTTTCCGCCGGCGTTCTTCTCACAA
                      ____________________________________________________________
consensus             GACTCAACAGTGCTGCTCGGGCTAGGACTCTGTCCGTTTCCGCCGGCGTTCTTCTCACAA
 
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rJMSF015C14-          ACGCTATTCTTCACG                                             
JMSF026J23+           ACGCTATTCTTCACGACGCGTAATTGCGTGGCAAAATTGATCGGAAGGAGATCCTCCGGC
                      ____________________________________________________________
consensus             ACGCTATTCTTCACGACGCGTAATTGCGTGGCAAAATTGATCGGAAGGAGATCCTCCGGC
 
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JMFF039L07+                                                CCCTGGCCGCCTTGTCGTAAGCC
JMSF026J23+           ACCGGAAAATTAGTCTTGGCCTTGGAACCCCGGAACTCCCTGGCCGCCTTATCGTAAGCC
                      ____________________________________________________________
consensus             ACCGGAAAATTAGTCTTGGCCTTGGAACCCCGGAACTCCCTGGCCGCCTTGTCGTAAGCC
 
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JMFF039L07+           CTAGCGGCCTCCTCCGCCGTCTCGAACGTCCCGAGCCAAACCCGCGTCCTCCGAGCGGGA
JMSF026J23+           CTGGCCGCCTCCTCCGCCGTATCAAACGTCCCGAGCCAAACGCGGCTCTTCTTGCCGGGA
JMSF015C14+              GCCGCCTCCTCCGCCGTATCAAACGTCCCGAGCCAAACGCGGCTCTTCTTGCCGGGA
                      ____________________________________________________________
consensus             CTGGCCGCCTCCTCCGCCGTATCAAACGTCCCGAGCCAAACGCGGCTCTTCTTGCCGGGA
 
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JMFF039L07+           TCTCTGATCTCCGCCGCGTACTTCCCCCACGGCCTCTTCCT                   
JMSF026J23+           TCCCTGATCTCCGCCGCGTACCTCCCCCACGGCCTCTTCCTCACACCCCTAAAATGCACT
JMSF015C14+           TCCCTGATCTCCGCCGCGTACCTCCCCCACGGCCTCTTCCTCACACCCCTAAAATGCACT
                      ____________________________________________________________
consensus             TCCCTGATCTCCGCCGCGTACCTCCCCCACGGCCTCTTCCTCACACCCCTAAAATGCACT
 
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JMSF026J23+           TGCTCCTTCCGAATATCGTGCAACTTCGCCGCCGCAACCGCCATCGCCGTCCCCTTCTCC
JMSF015C14+           TGCTCCTTCCGAATATCGTGCAACTTCGCCGCCGCAACCGCCATCGCCGTCCCCTTCTCC
                      ____________________________________________________________
consensus             TGCTCCTTCCGAATATCGTGCAACTTCGCCGCCGCAACCGCCATCGCCGTCCCCTTCTCC
 
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JMSF026J23+           TTGGGAGCCATTCCAATTCCAACAAATATATATAATTATTATTATGCGCTCCGGGCGTGT
JMSF015C14+           TTGGGAGCCATTCCAATTCCAACAAATATATATAATTATTATTATGCGCTCCGGGCGTGT
                      ____________________________________________________________
consensus             TTGGGAGCCATTCCAATTCCAACAAATATATATAATTATTATTATGCGCTCCGGGCGTGT
 
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JMSF026J23+           AAATAAATTATGGGTGTGGGCTGCAGTGATAGAAACATGGAAATGAAGCGTACGGCTG  
JMSF015C14+           AAATAAATTATGGGTGTGGGCTGCAGTGATAGAAACATGGAAATGAAGCGTACGGCTGTC
                      ____________________________________________________________
consensus             AAATAAATTATGGGTGTGGGCTGCAGTGATAGAAACATGGAAATGAAGCGTACGGCTGTC