Contig 010634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014P08Sequence449010634 (2)ref|XP_007050650.1|3e-15Outer envelope membrane protein 7 [Theobroma cacao] gb|EOX94807.1| Outer envelop404010634 (2)ref|XP_007050650.1|2e-15Outer envelope membrane protein 7 [Theobroma cacao] gb|EOX94807.1| Outer envelop

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF014P08+ GAAGATAGCGCAGCGGAAATCGTGTGTGA
JMSF014P08- GAAGATAGCGCAGCGGAAATCGTGTGTGA
                      ____________________________________________________________
consensus GAAGATAGCGCAGCGGAAATCGTGTGTGA
 
. : . : . : . : . : . :
rJMSF014P08+ AGAGATAAAATGGGGGAGAGGGAGAAAAACTCGCTGAAACAAGCGGTGGTGGTTTTCGGA
JMSF014P08- AGAGATAAAATGGGGGAGAGGGAGAAAAACTCGCTGAAACAAGCGGTGGTGGTTTTCGGA
                      ____________________________________________________________
consensus AGAGATAAAATGGGGGAGAGGGAGAAAAACTCGCTGAAACAAGCGGTGGTGGTTTTCGGA
 
. : . : . : . : . : . :
rJMSF014P08+ GCCCTAGCTGCCGGATGGCTAGCAATTGAGGTCGCCTTCAAGCCGTTGCTGGACAAGGCC
JMSF014P08- GCCCTAGCTGCCGGATGGCTAGCAATTGAGGTCGCCTTCAAGCCGTTGCTGGACAAGGCC
                      ____________________________________________________________
consensus GCCCTAGCTGCCGGATGGCTAGCAATTGAGGTCGCCTTCAAGCCGTTGCTGGACAAGGCC
 
. : . : . : . : . : . :
rJMSF014P08+ AGAGCCGCCTTGAACAAGTCCGACCCGAATCACGACCCGGATGATGCACCCGAAATGTCG
JMSF014P08- AGAGCCGCCTTGAACAAGTCCGACCCGAATCACGACCCGGATGATGCACCCGAAATGTCG
                      ____________________________________________________________
consensus AGAGCCGCCTTGAACAAGTCCGACCCGAATCACGACCCGGATGATGCACCCGAAATGTCG
 
. : . : . : . : . : . :
rJMSF014P08+ CCGCTGGAAGCGGACGTCGACGCCGCCGACGACGCCTCCAAGGAAAGCAGCTGATTCTGA
JMSF014P08- CCGCTGGAAGCGGACGTCGACGCCGCCGACGACGCCTCCAAGGAAAGCAGCTGATTCTGA
                      ____________________________________________________________
consensus CCGCTGGAAGCGGACGTCGACGCCGCCGACGACGCCTCCAAGGAAAGCAGCTGATTCTGA
 
. : . : . : . : . : . :
rJMSF014P08+ TTTCTGAACGCCAAGGTTATAGGGAAAGCGTATATTAGTACTGTTAAGAACGATTAGTTT
JMSF014P08- TTTCTGAACGCCAAGGTTATAGGGAAAGCGTATATTAGTACTGTTAAGAACGATTAGTTT
                      ____________________________________________________________
consensus TTTCTGAACGCCAAGGTTATAGGGAAAGCGTATATTAGTACTGTTAAGAACGATTAGTTT
 
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rJMSF014P08+ TCTCCAATCTCTGTATTAGACTGATATATGCTGTTGGAGTGTTGGATGAACTTTTTCAGA
JMSF014P08- TCTCCAATCTCTGTATTAGACTGATATATGCTGTTGGAGTGTTGGATGAACTTTTTCAGA
                      ____________________________________________________________
consensus TCTCCAATCTCTGTATTAGACTGATATATGCTGTTGGAGTGTTGGATGAACTTTTTCAGA
 
. : . : . : . : . : . :
rJMSF014P08+ C
JMSF014P08- CTGTCTGTGTTGAATAATTCCTCTGGTTCTTAGTTATTATTTTCTGTGTCAAAAAAAAAA
                      ____________________________________________________________
consensus CTGTCTGTGTTGAATAATTCCTCTGGTTCTTAGTTATTATTTTCTGTGTCAAAAAAAAAA