Contig 010631:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B07Sequence571010631 (3)emb|CDP13813.1|6e-33unnamed protein product [Coffea canephora]638005355 (3)ref|XP_009599597.1|3e-53PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos
JMFF031P20Sequence600010631 (3)emb|CDP13813.1|3e-35unnamed protein product [Coffea canephora]649005355 (3)ref|XP_009599597.1|4e-54PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos
JMSF014D06Sequence511010631 (3)emb|CDP13813.1|2e-23unnamed protein product [Coffea canephora]789005355 (3)ref|XP_009599597.1|2e-83PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos

Alignment

This contig is upended


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JMFF031P20+                     TCTTTCCAGACTCAATAGCGACAGCCAATTGCTTCAGGACAACAGATGGA
                      ____________________________________________________________
consensus                       TCTTTCCAGACTCAATAGCGACAGCCAATTGCTTCAGGACAACAGATGGA
 
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JMFF031P20+           GGAATAACACCTGCATCCCAAAAAGTTTGGATCTTCCAACAAGGAACCTGATTTGATGTC
                      ____________________________________________________________
consensus             GGAATAACACCTGCATCCCAAAAAGTTTGGATCTTCCAACAAGGAACCTGATTTGATGTC
 
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JMFF031P20+           CTCCTGATCAGAAATTTCTCTATCCCTCATCAAGTATAAATTTTCATCAAAAATTGCATA
JMFF010B07+               TGATCAGAAATTTCTNTATCCCTCATCAAGTATAAATTTTCATCAAAAATTGCATA
                      ____________________________________________________________
consensus             CTCCTGATCAGAAATTTCTCTATCCCTCATCAAGTATAAATTTTCATCAAAAATTGCATA
 
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JMFF031P20+           TGCCATAGTTGAATTCTCAGTATCTTCTGCTCCTCGTTTCCCTATTCTTATGCTCTTAAG
JMFF010B07+           TGCCATAGTTGAATTCTCAGTATCTTCTGCTCCTCGTTTCCCTATTCTTATGCTCTTAAG
JMSF014D06+                                        CTCCTCGTTTCCCTATTCTTATGCTCTTAAG
                      ____________________________________________________________
consensus             TGCCATAGTTGAATTCTCAGTATCTTCTGCTCCTCGTTTCCCTATTCTTATGCTCTTAAG
 
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JMFF031P20+           CCTATCTTGCCAATCCTGCTTTGTCTTTATTTGTGATGGTTTCCACCTCAAACTCTTCCC
JMFF010B07+           CCTATCTTGCCAATCCTGCTTTGTCTTTATTTGTGATGGTTTCCACCTCAAACTCTTCCC
JMSF014D06+           CCTATCTTGCCAATCCTGCTTTGTCTTTATTTGTGATGGTTTCCACCTCAAACTCTTCCC
                      ____________________________________________________________
consensus             CCTATCTTGCCAATCCTGCTTTGTCTTTATTTGTGATGGTTTCCACCTCAAACTCTTCCC
 
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JMFF031P20+           TTCATTACTACCCTTAGGCGGCCCGTCCTTATTACCCACGAATCCAGGCGTTGATATCTC
JMFF010B07+           TTCATTACTACCCTTAGGCGGCCCGTCCTTATTACCCACGAATCCAGGCGTTGATATCTC
JMSF014D06+           TTCATTACTACCCTTAGGCGGCCCGTCCTTATTACCCACGAATCCAGGCGTTGATATCTC
                      ____________________________________________________________
consensus             TTCATTACTACCCTTAGGCGGCCCGTCCTTATTACCCACGAATCCAGGCGTTGATATCTC
 
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JMFF031P20+           CGGCGACTGCTGATCAGAATCATCTCCAACTTGAATTTTAAAATGTTCAGCATTATCTGG
JMFF010B07+           CGGCGACTGCTGATCAGAATCATCTCCAACTTGAATTTTAAAATGTTCAGCATTATCTGG
JMSF014D06+           CGGCGACTGCTGATCAGAATCATCTCCAACTTGAATTTTAAAATGTTCAGCATTATCTGG
                      ____________________________________________________________
consensus             CGGCGACTGCTGATCAGAATCATCTCCAACTTGAATTTTAAAATGTTCAGCATTATCTGG
 
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JMFF031P20+           ATCAATGGAGGGATCAGATTTTTTAATATCCGTAAAGACTTTCTCCGCTTTAGCTGCAGC
JMFF010B07+           ATCAATGGAGGGATCAGATTTTTTAATATCCGTAAAGACTTTCTCCGCTTTAGCTGCAGC
JMSF014D06+           ATCAATGGAGGGATCAGATTTTTTAATATCCGTAAAGACTTTCTCCGCTTTAGCTGCAGC
                      ____________________________________________________________
consensus             ATCAATGGAGGGATCAGATTTTTTAATATCCGTAAAGACTTTCTCCGCTTTAGCTGCAGC
 
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JMFF031P20+           CGAATGGAAGGCCGTCCGAGCCCTGGAGACGAAGGACGGTTCCATTTCGAGCGAAGGGAG
JMFF010B07+           CGAATGGAAGGCCGTCCGAGCCCTGGAGACGAAGGACGGTTCCATTTCGAGCGAAGGGAG
JMSF014D06+           CGAATGGAAGGCCGTCCGAGCCCTGGAGACGAAGGACGGTTCCATTTCGAGCGAAGGGAG
                      ____________________________________________________________
consensus             CGAATGGAAGGCCGTCCGAGCCCTGGAGACGAAGGACGGTTCCATTTCGAGCGAAGGGAG
 
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JMFF031P20+           TGTAGGATAAGCGAGAGCCAATCGAAATTTCAACAGCCAGATTGACAAGGAAGGAAGAGC
JMFF010B07+           TGTAGGATAAGCGAGAGCCAATCGAAATTTCAACAGCCAGATTGACAAGGAAGGAAGAGC
JMSF014D06+           TGTAGGATAAGCGAGAGCCAATCGAAATTTCAACAGCCAGATTGACAAGGAAGGAAGAGC
                      ____________________________________________________________
consensus             TGTAGGATAAGCGAGAGCCAATCGAAATTTCAACAGCCAGATTGACAAGGAAGGAAGAGC
 
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JMFF031P20+           TGAATCGAGC                                                  
JMFF010B07+           TGAATCGAGCAAGTCTAACAGATTCAACACTGCTGTTGTTGTAGACCAGAGGCACCCAGT
JMSF014D06+           TGAATCGAGCAAGTCTAACAGATTCAACACTGCTGTTGTTGTAGACCAGAGGCACCCAGT
                      ____________________________________________________________
consensus             TGAATCGAGCAAGTCTAACAGATTCAACACTGCTGTTGTTGTAGACCAGAGGCACCCAGT
 
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JMFF010B07+           TTTCTACGGAGTTTTTTTTTCCTTTTTTAAATTT                          
JMSF014D06+           TTTCTACGGAGTTTTTTTTTCCTTTTTTAAATTTGCTCTGTAAATTTAGCAAAGGCCCTC
                      ____________________________________________________________
consensus             TTTCTACGGAGTTTTTTTTTCCTTTTTTAAATTTGCTCTGTAAATTTAGCAAAGGCCCTC