Contig 010629:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS037C04Sequence642010629 (5)emb|CDO99992.1|4e-66unnamed protein product [Coffea canephora]
JMFS146H10Sequence626010629 (5)emb|CDO99992.1|6e-78unnamed protein product [Coffea canephora]
JMFS163G10Sequence621010629 (5)emb|CDO99992.1|6e-72unnamed protein product [Coffea canephora]
JMSF004K17Sequence430010629 (5)emb|CDO99992.1|3e-36unnamed protein product [Coffea canephora]
JMSF013N05Sequence452010629 (5)emb|CDO99992.1|7e-37unnamed protein product [Coffea canephora]749021413emb|CDO99992.1|2e-71unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS146H10+                                                                TCATATA
                      ____________________________________________________________
consensus                                                                  TCATATA
 
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JMFS146H10+           TTCCAGCTCCAATGATTTCTTGCACTGTTCATGATACTCTCTTGGAAGACCCATAGCAGT
JMFS037C04+                                                        AAGACCCATAGCAGT
                      ____________________________________________________________
consensus             TTCCAGCTCCAATGATTTCTTGCACTGTTCATGATACTCTCTTGGAAGACCCATAGCAGT
 
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JMFS146H10+           TGAAGTAGAGAGTGAAAATTCAGAAACCAGAGATTCCAAAAAATTAATTCCAGCGAACTG
JMFS037C04+           TGAAGTAGAGAGTG-AAATTCAGAANCCAGAGATTCCAAANAATTAATTCCAGCGAACTG
JMFS163G10+                          AAATTCAGAAACCAGAGATTCCAAANAATTAATTCCAGCGAACTG
                      ____________________________________________________________
consensus             TGAAGTAGAGAGTGAAAATTCAGAAACCAGAGATTCCAAAAAATTAATTCCAGCGAACTG
 
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JMFS146H10+           CGCATCAAGACCATGGCTGCCAATGATTGCCTGTCTCACCTCAAGGAAAAATGCCTCCTT
JMFS037C04+           CGCATCAAGACCATGGCTGCCAATGATTGCCTGTCTCACCTCAAGGAAAAATGCCTCCTT
JMFS163G10+           CGCATCAAGACCATGGCTGCCAATGATTGCCTGTCTCACCTCAAGGAAAAATGCCTCCTT
                      ____________________________________________________________
consensus             CGCATCAAGACCATGGCTGCCAATGATTGCCTGTCTCACCTCAAGGAAAAATGCCTCCTT
 
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JMFS146H10+           ATCAGCAGCTACAAATTCCAGCCATCCTCTTTTCATCAATTGAGCAGCCACTGAAGCAAC
JMFS037C04+           ATCAGCAGCTACAAATTCCAGCCATCCTCTTTTCATCAATTGAGCAGCCACTGAAGCAAC
JMFS163G10+           ATCAGCAGCTACAAATTCCAGCCATCCTCTTTTCATCAATTGAGCAGCCACTGAAGCAAC
                      ____________________________________________________________
consensus             ATCAGCAGCTACAAATTCCAGCCATCCTCTTTTCATCAATTGAGCAGCCACTGAAGCAAC
 
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JMFS146H10+           TTTTGCTTGGACATAGCCTTCAGCTGAGCCGGCATGTTTTAAAACAAAGCAAAGACAAAA
JMFS037C04+           TTTTGCTTGGACATAGCCTTCAGCTGAGCCGGCATGTTTTAAAACAAAGCAAAGACAAAA
JMFS163G10+           TTTTGCTTGGACATAGCCTTCAGCTGAGCCGGCATGTTTTAAAACAAAGCAAAGACAAAA
JMSF004K17+                                         GGCATGTTTTAAANCAAAGCAAAGACAAAA
JMSF013N05+                                       CCGGCATGTTTTAAAACAAAGCAAAGACAAAA
                      ____________________________________________________________
consensus             TTTTGCTTGGACATAGCCTTCAGCTGAGCCGGCATGTTTTAAAACAAAGCAAAGACAAAA
 
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JMFS146H10+           ACTTATCAACTGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
JMFS037C04+           ACTTATCAACTGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
JMFS163G10+           ACTTATCAACTGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
JMSF004K17+           ACTTATCAACTGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
JMSF013N05+           ACTTATCAAATGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
                      ____________________________________________________________
consensus             ACTTATCAACTGTCTTTTATCATCAGCCTCGAGAAATACCCATTCTCGTATTGCTGCATC
 
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JMFS146H10+           TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCAACCTGAGAATTCTCAAGAATGAA
JMFS037C04+           TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCCACCTGAGAATTCTCAAGAATGAA
JMFS163G10+           TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCCACCTGAGAATTCTCAAGAATGAA
JMSF004K17+           TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCCACCTGAGAATTCTCAAGAATGAA
JMSF013N05+           TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCCACCTGAGAATTCTCAAGAATGAA
                      ____________________________________________________________
consensus             TCTAAGTGCTCCAGCAGCCTGGAACCGTGCCATTGCCACCTGAGAATTCTCAAGAATGAA
 
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JMFS146H10+           TTGGCATGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
JMFS037C04+           TTGGCATGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
JMFS163G10+           TTGGCATGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
JMSF004K17+           TTGGCATGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
JMSF013N05+           TTGGCANGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
                      ____________________________________________________________
consensus             TTGGCATGCCTGGTATGGCCGAGGAGACTGGCTAAGGGATGAAATGATTGCCTCAGCTGC
 
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JMFS146H10+           TGGATCACCATGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
JMFS037C04+           TGGATCACCATGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
JMFS163G10+           TGGATCACCATGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
JMSF004K17+           TGGATCACCATGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
JMSF013N05+           TGGATCACCANGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
                      ____________________________________________________________
consensus             TGGATCACCATGCACCTTCTGAATTGAAGTACAAGCGAGCTCAAAAGTTCGCATAGTGGA
 
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JMFS146H10+           TTGGAGCTGATCCAAATCCATGGCTCAGCTGCTCCTCGAATGTATCAGTC          
JMFS037C04+           TTGGAGCTGATCCAAATGCATGGCTCAGCTGCTCCTCGAATGTATCAGTC          
JMFS163G10+           TTGGAGCTGATCCAAATCCATGGCTCAGCTGCTCCTCGAATGTATCAGTC          
JMSF004K17+           TTGGAGCTGATCCAAATCCATGGCTCAGCTGCTCCTCGAATGTATCAGTC          
JMSF013N05+           TTGGAGCTGATCCAAATCCATGGCTCAGCTGCTCCTCGAATGTATCAGTCTAAAAAATAT
                      ____________________________________________________________
consensus             TTGGAGCTGATCCAAATCCATGGCTCAGCTGCTCCTCGAATGTATCAGTCTAAAAAATAT
 
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JMSF013N05+           GTATCAAAACACAATATTATGCATAACTGTATACATCTATCCATCTATATATCTGTGCGT
                      ____________________________________________________________
consensus             GTATCAAAACACAATATTATGCATAACTGTATACATCTATCCATCTATATATCTGTGCGT
 
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JMSF013N05+           GCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTAGACATAGAAAATTGGCGTACCGTC
                      ____________________________________________________________
consensus             GCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTAGACATAGAAAATTGGCGTACCGTC