Contig 010625:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013B04Sequence291010625 (2)ref|XP_009616953.1|4e-10PREDICTED: COBW domain-containing protein 1 isoform X1 [Nicotiana tomentosiform780012574 (2)ref|XP_006348708.1|4e-109PREDICTED: COBW domain-containing protein 1-like [Solanum tuberosum]
JMSF017C11Sequence457010625 (2)ref|XP_006348708.1|4e-49PREDICTED: COBW domain-containing protein 1-like [Solanum tuberosum]731012574 (2)emb|CDP00418.1|9e-57unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF017C11+                           TATGCTTCACAGTACAGCAAATGCAGCCATTTGCTAGCTCCACC
                      ____________________________________________________________
consensus                             TATGCTTCACAGTACAGCAAATGCAGCCATTTGCTAGCTCCACC
 
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JMSF017C11+           CACTCCTCCACAAGCCCACCACTTTCTCCTTCATTGATCATCGCTCTCTCCACTCCCAAC
                      ____________________________________________________________
consensus             CACTCCTCCACAAGCCCACCACTTTCTCCTTCATTGATCATCGCTCTCTCCACTCCCAAC
 
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JMSF017C11+           TCCTCCCCAAACTCATTGAGTATTACTGCTATTTTCTTCCCATGTTGTGCACTCAATATG
                      ____________________________________________________________
consensus             TCCTCCCCAAACTCATTGAGTATTACTGCTATTTTCTTCCCATGTTGTGCACTCAATATG
 
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JMSF017C11+           TAATTTATCAGAGTCGATTTGCCGGCGCCGAGGTAGCCTGTGATGACAGTAACACCGACT
JMSF013B04+                      AGTCGATTTGCCGGCGCCGAGGTAGCCTGTGATGACAGTAACACCGACT
                      ____________________________________________________________
consensus             TAATTTATCAGAGTCGATTTGCCGGCGCCGAGGTAGCCTGTGATGACAGTAACACCGACT
 
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JMSF017C11+           GGAGGGGCATCGGTGGTTTCTGGCTGGTGATTGATTTGGGTAGATGGGCAAGGAGTGCTT
JMSF013B04+           GGAGGGGCATCGGTGGTTTCTGGCTGGTGATTGATTTGGGTAGATGGGCAAGGAGTGCTT
                      ____________________________________________________________
consensus             GGAGGGGCATCGGTGGTTTCTGGCTGGTGATTGATTTGGGTAGATGGGCAAGGAGTGCTT
 
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JMSF017C11+           TCATTGACAGCAGCAGTAATCTCAACAGCAAGTGGTGGTTCTTCACCATCTTCTTCCATG
JMSF013B04+           TCATTGACAGCAGCAGTAATCTCAACAGCAAGTGGTGGTTCTTCACCATCTTCTTCCATG
                      ____________________________________________________________
consensus             TCATTGACAGCAGCAGTAATCTCAACAGCAAGTGGTGGTTCTTCACCATCTTCTTCCATG
 
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JMSF017C11+           GTCACTGAGAGTAACAGAACGCGGCTGACAGTGCTGCACAATAACGCAGCCAAACCGGGA
JMSF013B04+           GTCACTGAGAGTAACAGAACGCGGCTGACAGTGCTGCACAATAACGCAGCCAAACCGGGA
                      ____________________________________________________________
consensus             GTCACTGAGAGTAACAGAACGCGGCTGACAGTGCTGCACAATAACGCAGCCAAACCGGGA
 
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JMSF017C11+           ACCAAGGCGAAAACGAGAAAGGGAAATTGGAGAAAAGGCTGATTCTAGTTCT        
JMSF013B04+           ACCAAGGCGAAAACGAGAAAGGGAAATTGGAGAAAAGGCTGATTCTAGTTCTACGACGCC
                      ____________________________________________________________
consensus             ACCAAGGCGAAAACGAGAAAGGGAAATTGGAGAAAAGGCTGATTCTAGTTCTACGACGCC