Contig 010624:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS145B11Sequence627010624 (2)ref|XP_004232283.1|1e-11PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
JMSF012P08Sequence396010624 (2)ref|XP_004232283.1|2e-26PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]753011279 (2)ref|XP_009761506.1|3e-44PREDICTED: WAT1-related protein At5g40240-like isoform X2 [Nicotiana sylvestris

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS145B11+ TTTCCAGACAAAAGCATTCTGTGATTAACATATACAGTAG
                      ____________________________________________________________
consensus TTTCCAGACAAAAGCATTCTGTGATTAACATATACAGTAG
 
. : . : . : . : . : . :
JMFS145B11+ ATCAGAAGACTTGTCTTACCTGAAAACCATTGTAAGAACAAATGTAAAAGCAGGCATCAA
                      ____________________________________________________________
consensus ATCAGAAGACTTGTCTTACCTGAAAACCATTGTAAGAACAAATGTAAAAGCAGGCATCAA
 
. : . : . : . : . : . :
JMFS145B11+ GTTACTAATGCCTGCAGAGAGAGTAGGGGAGCTATAGTTGAGCCCTTGGTTACCCAAAAC
                      ____________________________________________________________
consensus GTTACTAATGCCTGCAGAGAGAGTAGGGGAGCTATAGTTGAGCCCTTGGTTACCCAAAAC
 
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JMFS145B11+ CACCACACATGTCCTGCAATATCATAATTATAAATTTTTCTTAGATAGATCTTCAATTCA
                      ____________________________________________________________
consensus CACCACACATGTCCTGCAATATCATAATTATAAATTTTTCTTAGATAGATCTTCAATTCA
 
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JMFS145B11+ TACCTTCAATTTCTTGTTAGCTGCGCTTTATGAATGTAGGATTAATACCCGAGCAAGCCA
                      ____________________________________________________________
consensus TACCTTCAATTTCTTGTTAGCTGCGCTTTATGAATGTAGGATTAATACCCGAGCAAGCCA
 
. : . : . : . : . : . :
JMFS145B11+ AGGATTAAGCATCTGCTCAGCATATACGAGGATAGAGGTAAAGGATGACTTCTGAAACAT
                      ____________________________________________________________
consensus AGGATTAAGCATCTGCTCAGCATATACGAGGATAGAGGTAAAGGATGACTTCTGAAACAT
 
. : . : . : . : . : . :
JMFS145B11+ GAAAGTAAACTTATGAGTTGGAATGAAGCTTAATTTGATAAGTAAACAATGGGATTGGTT
                      ____________________________________________________________
consensus GAAAGTAAACTTATGAGTTGGAATGAAGCTTAATTTGATAAGTAAACAATGGGATTGGTT
 
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JMFS145B11+ TGTTAAACCGGCCTGTGGCGCTGGATGATGAATCCGGGGAGAAGAAAGAGGACGCCAAGG
JMSF012P08+ CTGTGGCGCTGGATGATGAATACGGGAAGAAGAAAGAGGGTGCCAAGG
                      ____________________________________________________________
consensus TGTTAAACCGGCCTGTGGCGCTGGATGATGAATCCGGGGAGAAGAAAGAGGGTGCCAAGG
 
. : . : . : . : . : . :
JMFS145B11+ AAATTGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCGCTTTGGCT
JMSF012P08+ AAATAGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCAATTTGGCT
                      ____________________________________________________________
consensus AAATTGTAGTAAACGATGTATATAAGAGGGCTCAACCCGGAGTTGAGGGCCGCTTTGGCT
 
. : . : . : . : . : . :
JMFS145B11+ ATTGTGGATGTTGCCATCTCCATACACACCACTACTATCATTGCTGCAAATGGAAGTACT
JMSF012P08+ ATTGTGGTTCTTGCCATCTCCAGACACACCACTACTATCATTCCTACAAATGGAACTACT
                      ____________________________________________________________
consensus ATTGTGGTTGTTGCCATCTCCATACACACCACTACTATCATTGCTGCAAATGGAAGTACT
 
. : . : . : . : . : . :
JMFS145B11+ TCCTTTCTCAAAATCTCACTTCTCATT
JMSF012P08+ TCCTTTCTCATAATCTCACTTCCCATTATTGCCATATCTTTGCTATCTCACACACTCTCC
                      ____________________________________________________________
consensus TCCTTTCTCATAATCTCACTTCTCATTATTGCCATATCTTTGCTATCTCACACACTCTCC